Pituophis catenifer annectens (San Diego gophersnake): 139316369
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Entry
139316369 CDS
T11059
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139316369 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139316369 (NUP98)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139316369 (NUP98)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139316369 (NUP98)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139316369 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
139316369
NCBI-ProteinID:
XP_070799157
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MFNKSFGTPFGGNTGGFGTTSTFGQNTGFGATSGGAFGTSAFGSSNNAGGLFGSTQTKPG
GLFGASTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSTQSNAFAQNKPVGFGN
FGTSTSSGGLFGTTNTASNPFGGTSGSLFGATSFSTVPTGTTIKFNAPNGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATPGLFGSSTAASSTAT
GLFGSSTTNTGFSYGASKTAFGTSTTGFGTGTGSLFGSNQPTPSLFNKPFGQPTTAQNTG
FSFTNTSTLGQPNTNTMGLFGAAQPTQTGSIFGTAANTNTAAAFGTGTGLFGQPNTGFGV
GGSSLFSNKPAGFGTTTTSAPSFGTTTTGLFGFNANTTGNSLFGNKPATGALGPGLGAGF
GTALNPGQNSLFGSTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNVSAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTSGSSKSHLFDGLDDDEPSLTNGAFMPKKSIKKLVLKNLNSGSLFSPGGAE
VDDIASPSIYPENGDRSVSENHRQDEEQEDDSYSREMSRFLTNVITKPLPQTPENAPHKH
HNNSVDDTLLALNVRPALRNGLENSLEEASYHEESLQEDLDKESEDQLHSTHPAGIVLTR
MGYYTIPSLEELARMTSDTGECIVTDFTVGRKGYGSIYFEGEVNVTNLNLDEIVHIRRKE
VIVYPDDELKPPIGEGLNRRAEVTLDGVWPTDKTSRSVIKSPERLTEMNYEGRLEAASRK
QGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEDEDNLAKVEAKKLKTAQVPLPGQLMSQ
QMAAAGKLAPPSKSPEADHLGKGVEFDSDMADITQELLPESLAEENLVEEQEPVPASTHI
ASSLDINPHTLQIMKASLLADEEELDWMTDPQFGKAAAEMDLSQEICSPRLPISSSSRGW
KSRPPGSRLLQSRLSTGSFLLPSASLQDSRSPRTSSLGGALPAPPWAALSPLASAFVMPR
SAPEMPLKTVGIRRQPGLVPLKKSIAYGKGRLLKDMALFMGRSFRVGWGPNWVLAHGGDR
LSPLSEPEDHGEATEYGFLPAPVAPKQVSESPFKVHLEKLTLDGKPTNRVYLLPLEIKLK
HSTIHLDDPCPFLAPNPGVATIHEYSAWASEASEDAEEEEEAVLRAWGLVWRLCEALWGR
LKELEGRLEEPGEYGLLLERRRAFSHWLSRTAAEQIQEEVSLRQNDNPAEAVFSYLTGKQ
IGNACRLAQQSGDLRLSLLLSQLVGSQEVRELLALQLADWHQLQADSFIQDERLRIFCLL
AGKPVWQLSEKRTINVCSQLDWKRSLGVHLWYLLPSTAPLSKALTMYEAAFQVSPDGERY
ACPPLPPYLEDSGYVVENDNAQRPLRDVCFHLLKLYSDRCYDLHQLLDPRSITADPLDHR
LSWHLWEALRALNYTHLSEQCQGVLNASYAAQLEREGLWEWAVFVLLHTSNAQTRERAVR
ELLNRHCKLLELPESRDKEAFLTQKLCVPPEWIYEAKALWARREGDKTREALYLFKAGHW
NQCHQLVVRHLASDAIINENYTYLKGFLEDLASPERCSLIQGWDTAGLVFLDYLQVIEMV
SRIQQLDCTGYELEEIHSKVISLCGRIELVQCHGAKDRLAQSEMAKRNADILRVVLSLQH
PPDTASGATLDVQRVPLRLLAPHISRLPMPEDYALEELRGLTQSYLRELMVVAQ
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcttttggaacgccttttggcggcaacacagggggatttgggacaact
tcgacttttggacagaatactggctttggggcaaccagcggaggagcctttgggacgtct
gccttcggatccagtaacaatgccggaggactctttggtagcactcagaccaagccagga
gggctctttggggcaagtactttcagccagccagccacgtcatccactagtaccggtttt
ggtttcggcacgtcaactgggacttccagcggcctgttcgggaccgcaagcacaggggga
ggcctcttctccacccagagcaatgccttcgcccagaacaagccggtggggtttggcaat
tttgggacaagcaccagcagtggaggattgtttggcaccactaacacagcctccaatcca
tttgggggcacatctggctccctttttggggctacaagcttttccaccgtccctactggc
accacgattaaattcaatgcaccaaacggtacggacaccatggtcaagtctggcgtcagc
accaacatcagcaccaagcatcagtgcatcactgctatgaaggagtatgaaagcaaatca
ctcgaggagctccgtttggaagactaccaggccaacaggaaaggccccaccaacccagtg
ggagctggagccacgccaggcttatttggatcgtcaaccgctgcatccagcacggccaca
ggactcttcggctcctccaccaccaacacaggattttcatacggggcaagtaagacagcc
tttggaaccagtaccactggttttgggacaggaaccggaagtctctttggttcgaatcag
ccgacacccagcctcttcaataaaccttttggtcagcccaccaccgcccagaacacgggt
ttttcgttcaccaacaccagcacccttggacagcccaacacgaacacgatgggattgttt
ggagctgcccagcccacccagaccggaagcatttttggcacagcagccaataccaacaca
gcagctgcgtttggaacaggaaccggactctttgggcagcccaacaccggatttggtgtt
ggtggctcgtctctctttagtaacaagcctgctggctttggcaccacaaccaccagcgca
ccctcgtttgggacaacgacaactggacttttcgggttcaatgcaaacaccacaggaaac
agcctctttggaaacaagcctgcaaccggggctctgggtccaggcctcggggcgggattt
gggacagcccttaatccagggcagaattcactctttggcagcacgcagcccaagctaggg
ggcacgctggggacaggagcctttggtgcccctggatttaacacatcaaccgccacgttg
ggctttggagctccacagcctgctgtggctctgacagatcccaacgtctctgcggcccag
caggccgttctgcagcagcacctcaacagcttgacctactcacccttcggggactcgcct
ctcttccgaaaccccatgtctgacccgaagaagaaggaggagaggctgaagccaaccaac
ccggcggcccagaaggcactgaccaccccaacacattacaaactgactccccgcccagca
actcgtgtgcgccccaaagctttgcagacaagcggctcctccaaatcccaccttttcgat
ggtctggacgacgatgagccttctctgaccaatggggccttcatgcccaagaagagcatt
aagaagctggttttgaagaacctcaacagtggcagcctcttctctcccggcggtgctgaa
gtggatgacattgcctcgccttccatctatcctgagaacggggatcggtcggttagtgag
aaccatagacaggacgaggagcaggaagacgacagctactcccgggaaatgtccaggttc
ttaaccaacgtcattaccaagcccctgccccagactccagagaatgccccgcacaagcat
cacaacaacagtgtggacgacaccctcctggccctgaatgtgcggccggcgctgcggaac
gggctggaaaacagcctggaggaagcttcctaccacgaggagtccctgcaggaggacctg
gacaaggagagcgaagaccagctccattccacccatccggcaggaattgtcttgacacga
atgggctactacaccattccctccctggaggagctagccagaatgacgagtgacacggga
gagtgcatcgtgaccgacttcactgttggccgtaaaggctacggctccatctacttcgag
ggcgaggtcaatgtgaccaacctgaacctggatgagatcgtgcacatccgcaggaaagag
gtcatcgtgtacccggatgatgaattgaagccccccatcggggagggcctgaacaggcga
gccgaagtcaccttggatggagtttggcccacggacaaaacctcgcgttccgtgatcaag
agcccagaacggctgacagaaatgaactacgaaggccgactggaagccgcctctcggaaa
cagggagcccagtttaaggagtaccgccccgaaacgggttcatgggtattcaaggtggcc
cacttctcaaagtacggcctgcaagactccgatgaggaagatgaggacaacctagccaaa
gtggaggctaagaagttaaaaactgctcaggtgcctctgccgggccagcttatgtctcag
caaatggctgcagctgggaagttggcacctccttccaagagccccgaggctgaccatctg
gggaagggggtcgaattcgacagtgacatggcagacatcacccaggagctgcttcctgag
tccctggcggaagagaatctggtggaagaacaggagccagtgccggcctcgacccatatt
gcgtcctccctggacatcaaccctcacacgctgcagatcatgaaggcttctttgctggca
gatgaggaagagctggactggatgacggatccccagtttggcaaggcagctgcagaaatg
gacctttcgcaagagatctgctctccgaggcttcccatctcctcctcctcacgaggatgg
aaaagccgccccccaggcagcaggctgctgcagtcacgactctccaccggctctttcctg
ctcccaagcgcctccctccaggacagccgcagtccgaggacttcctcactgggcggggct
ttgcccgccccgccttgggctgctctttctcccctggcttccgccttcgtcatgcctcgc
tcggctcctgaaatgcccctgaagaccgtgggcatccgcaggcagccaggcctggtgccc
ctgaagaaatcgatcgcctacgggaaaggacggctgctgaaggacatggccctcttcatg
ggacgctccttccgggtgggctgggggcccaactgggttttggcccacggcggagaccgc
ttgagccccctgagcgagccagaagatcacggggaggccacagagtacggattcttgcca
gcccccgtggcacccaagcaggtctccgagtcccccttcaaggtccacctggagaagctg
accttggacggcaagccgaccaaccgcgtctacctcctcccgttagagatcaagctgaag
cacagcaccatccacctggatgacccctgccccttcctggcccccaaccccggcgtggca
accatccatgaatattccgcctgggcctcggaggcgtcagaagacgcagaagaagaagaa
gaagcggtgttgagggcctggggcctggtctggcgcttgtgcgaggcgctctggggccgc
ctgaaagagctggaggggcgcctggaggagcccggggagtacgggctgctgctggagcgc
cggagggccttctcccactggctctcccggacggcggctgagcagatccaggaggaggtc
tcgctccggcagaatgacaaccccgccgaggccgtcttcagctacctcaccgggaagcag
atcggcaacgcctgccgcctggctcagcagtctggggatctccgcctgtctctgctcctc
tcccagctggtggggagccaggaggtccgggagctgctggccctgcagttggccgactgg
caccagctccaagcggacagcttcatccaggacgagcggctgcgcattttctgcctcctg
gctggcaaaccggtgtggcagttatccgagaagagaaccatcaacgtttgttcccaactg
gactggaagcgctctctcggggtccacctgtggtacctgctgccttcgacggcccccctt
tcgaaggccctcaccatgtacgaagccgcattccaggtctccccagacggagagaggtac
gcgtgccctccgctgcctccctacctagaggactcgggctacgtggtggagaacgacaac
gcacaacgcccgctgcgagacgtgtgtttccacctgctgaagttgtatagtgacaggtgc
tacgacttacaccaactgctggacccccgcagcatcaccgcagaccccttggaccaccgt
ctcagctggcacctgtgggaagcgctccgggccttgaattacacccacctgtccgagcag
tgccagggggtgctgaacgccagctacgcagcccagctggagagggaggggctgtgggag
tgggccgtcttcgtcctgcttcacacctccaacgctcaaacgcgggaaagagccgtgcgg
gagctgctgaaccgtcactgcaaactgctggagttgcccgagtccagggacaaggaggcc
ttcctgacgcagaagctgtgcgtccccccagagtggatctacgaggcgaaggccctctgg
gcccggagggagggggacaagacccgcgaggccctctacctcttcaaggccggccactgg
aaccagtgccaccagctggtggtcaggcacttggcttctgacgccatcattaatgagaat
tacacctacctgaagggattcttggaagacctggccagtcccgagcgctgcagcctcatt
cagggttgggacaccgctgggctggttttcttggactacctccaggtcatcgagatggtc
agcaggattcagcagctggactgcaccggctatgagctggaggagatccactccaaagtg
atctccctctgcggcaggatagagctggtccaatgtcacggtgccaaggacaggctggct
cagtcagaaatggccaagcgcaacgcagacatcctccgagtggtgctgagcttgcagcac
cctccggatacggcctccggcgccaccctcgacgtgcagagggtccccctgcgcctgctg
gccccccacatcagccggctccccatgccggaggactacgcgctggaggagctccgcggg
ctgacccagtcctaccttcgggaactgatggtggtggcccagtga
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