Pituophis catenifer annectens (San Diego gophersnake): 139316433
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Entry
139316433 CDS
T11059
Symbol
PCDH20
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
139316433 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcae01009
]
139316433 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139316433 (PCDH20)
Protein phosphatases and associated proteins [BR:
pcae01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139316433 (PCDH20)
Cell adhesion molecules [BR:
pcae04515
]
Cadherins
Protocadherins
139316433 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139316433
NCBI-ProteinID:
XP_070799253
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Position
Unknown
AA seq
953 aa
AA seq
DB search
MRRRGNETRRSWPPALESSWRQGKRSRRLAMGQRSSPGRRRRRAPGQRTLPNVFIFLLFL
EPFNCFASYSRASELFYSINEGLPAGFLIGNLAQDLQLAEGEGKVRKQETEQWGKSPLSF
SFASQGLGSQYINLDNQTGILCTSAQEIDRETLCLEDNVGSTVVSSSSSSPLPSSESCLL
LLDVLVLPQEYFRLVKVKIAIHDINDNAPWFPVPQIHLSVPENSPVNTRLAIEHPAVDPD
MGTNGVQTYQLQENYGVFTLDVEENESGERTPYLIVMGTLDREATDQYVTLIIAEDGGIP
PLVGSATLTIGISDINDNCPQFNETQISVTIFGNSSIGLHIASVHAVDIDHGINAEISYS
YSQKVSFLSRTLFRLNESTGVIKLFKRINGDTPLLHRLSVLANGPGCIPAVITVLVSIIK
VTMRPPEVIPRFIANEAEGVVYLRELEPIHTPIAFFTIKDPDEKYKVDCYLEGDGPFQLT
PYQPYRNEYLLETTKALDYEVQQLYEVSVVAWNTEGFHVNKIIKVQVLDDNDNSPVFSEA
LVELSIEENNAPHAFLTKLHATDADSGERGQVSYFLGPEAPSYFSLDKVTGILTVSTQLD
REEREKYRYTVRAVDSGLPPRESIATVTLSVLDKNDNSPRFINKDFSFFVPENFPGFGEI
GVISVTDADIGQNGWVALSVVNRSDIFVIDTGKGVLRAKVSLDREQQSSYVLWVEAVDGG
DPPLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAIDNDTGMNA
VIAYSIIGRRGPRPESFKIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVM
VNLFVNDTVSNESYIESLLRRESDINIEEKEPQISIEPTHRRAEAVSCMPTLVTLSIISL
SSISLVTGMGIYICLRKGKKYHRGDEGLEVQIPLNGRIDLHRLEKKPVEISNI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgccgagggaatgagacgcggcgcagctggcccccagccctcgagtccagctgg
cggcagggcaagcggagccggcggctggctatggggcagcgatccagccctgggaggagg
aggagaagagcccccggtcagaggacgctgccgaacgtgttcattttcctgcttttcttg
gaaccgtttaactgctttgcaagctacagtcgggccagcgaactcttctacagcatcaat
gaaggactccccgctgggttcctcatcgggaatctagctcaggatttacagctggcagag
ggagaaggaaaggtgaggaagcaggagaccgagcaatgggggaagagtcctctttccttc
agctttgcctcccaaggactgggaagccaatacatcaacctggacaatcagacaggtatt
ctgtgcacctcagcccaggaaattgaccgagaaacactctgtttggaggataatgttggc
tccacggtggtttcgtcttcttcttcttctccgcttccatcctccgagtcatgcttgctc
ttgctagatgttctggtgttaccccaggagtatttccgtctggtcaaagtgaagatcgcc
atccatgacatcaatgataacgcaccctggttccctgtgccgcagatacacctctccgtg
cctgaaaattcacccgtcaatacccggttagctatagagcatccggcggtggacccggac
atgggaaccaatggggtgcagacataccaactccaagaaaattacggggtttttacgttg
gacgtggaggagaatgaaagtggagagagaacaccttatcttattgtcatgggtaccctg
gacagggaggccaccgaccaatatgtcactcttataattgcagaggatggtggcattcca
ccactggtgggtagcgccaccctcaccattggcatcagtgacattaatgacaactgtccc
cagttcaatgagactcaaatcagcgtcaccatctttggaaactctagcattgggttgcac
atagcttcggtccatgctgtggatatcgatcacggaatcaatgccgagataagctattcc
tacagccaaaaagtttctttcctgtcccgcaccctcttccgtcttaacgaaagtacggga
gtgattaagttattcaagaggattaacggtgacacacctcttctgcatcggctgagtgtc
ttggccaacggtcccggttgcatcccagcggtgataaccgtgttggtatccatcatcaaa
gtcaccatgagacctcctgaagtcattcctcgctttattgctaacgaagcagaaggggtg
gtttatttgagagagttggaacccatccacacccccattgctttttttaccatcaaggac
cccgatgaaaaatataaagtcgactgctatttggagggggatggccctttccaattgacc
ccttatcaaccctatcgcaatgagtatcttttggagactaccaaggccttggattatgag
gttcagcagttgtacgaggtctcggtggttgcgtggaataccgaggggtttcatgtgaat
aaaatcatcaaagtgcaggttctggatgataatgacaactctcccgttttctctgaagcc
ttggtagaattatcgatagaggaaaacaatgccccccatgcatttttgaccaaactgcat
gccacggatgccgacagcggagaaagaggccaagtgtcctatttccttgggcccgaggcg
ccttcctatttttccttagacaaagttactgggatccttaccgtttctacccagctggat
agagaggaacgtgagaaataccgctacaccgtccgagctgtggattctggcctgcccccg
cgagaatccatcgccaccgtgaccctctctgtgttggataaaaatgacaacagcccgaga
tttatcaacaaggatttcagtttcttcgtaccggagaatttcccgggctttggtgaaatt
ggagttataagtgtcaccgatgcagacattgggcaaaatggatgggtagccctttctgtg
gtcaacaggagtgatatttttgtgattgacactggcaaaggtgtgttgagagccaaggtc
tctctcgacagggaacagcagagctcctatgtcttgtgggttgaagcagtggatgggggt
gacccgcctttgtcctcgacggctaagatcaccatcctcttactagacatcaatgataat
ccccccttggttttgtttccccaatctaacatgtcttaccttctagtccttccttccacg
ttgcccggctctcctatcactgaagtctatgctatagataacgacaccggtatgaatgcc
gttatcgcctacagcattatcgggaggagaggtcctcggccggagtccttcaagatcgac
cctaaaacaggcaacatcaccttggaagagtcgctcatgcaaaacgattacggcctgtat
cgccttctggtgaaagttagcgaccatggctatccggaacctctgcattccaccgtcatg
gtcaacctcttcgtcaacgacaccgtgagcaacgagagctacatcgaaagccttctgagg
agagagtccgacatcaatattgaggagaaagaaccccaaatttccatagagcccacccac
cggagagcagaggccgtgtcctgcatgcctactttggtgaccctctccataataagcttg
agttccatcagcctggtgacaggtatggggatttatatttgcctaaggaaggggaaaaaa
taccacagaggggacgagggtttggaagttcaaatcccattaaatgggagaattgaccta
catcggctagagaagaaaccggtggaaatttccaatatctga
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