Pituophis catenifer annectens (San Diego gophersnake): 139316482
Help
Entry
139316482 CDS
T11059
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139316482 (PCDH17)
Cell adhesion molecules [BR:
pcae04515
]
Cadherins
Protocadherins
139316482 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
139316482
NCBI-ProteinID:
XP_070799318
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MSLSAWCFFLCWAPALALRNLNYSVPEEQGAGTVIGNIGRDARLQSGSSGGSPSLERPRG
SKATFRVLENSAPHLLDVDGESGLLYTKQRLDREALCRRSSKCQLSLEVFANDQEICMIK
VEIQDLNDNAPAFPSDQVDLDISENAAPGTRFPLASAHDPDAGENGLRTYLLTRDDYGLF
ALDVKARGDGTKFPELVVQKPLDREEQSHHTLVLTALDGGEPPRSGTVQLNVRLIDSNDN
SPVFEAASYVVELPENVPLGTVLLDLNATDADEGTNGQVLYSFSGYTPDRVRELFSIDPQ
TGLIRVKGNLDYEEGNLVEIDVQARDLGPNPIPAHCKVTVHLLDRNDNAPTIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVQGSDGSGGDGAVPFTLEENYDNLYTVVT
DRPLDREVQDEYNVTILARDGGNPPLNSTKSFSVRILDENDNPPRFSKSLYVLQVPENNI
PGEYLGSVLAKDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSFNYEQTK
HFEFHVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNAGVGYPV
GTVRAMDNDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAELVVKVSD
HGKPSLSAVAKLIVRALAGPLPESGEPQVNGEQHRRPHWDLSLPLIVTLSTVSIILLAAM
ITIAVKCKRENKDIRTYNCRIAEYSHPQLGGGGGGGGGGGGSGGGKGKKKKISKNDIMLV
PSEGEDSRGPLNVMNVVSSPSLATSPIYFDYQTRLPLSSPRSEVMFLKPASNNLSVPQGH
VGCHTSFTGQGTNVSEVPPSRMSIIQTDNFPAESNYMGSRQQFVQSSSTFKDPERASLRD
SGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQEECINCTDECRVLGH
SDRCWMPQFPASNQTDNADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHT
ILIANVKPYLKAKRALSPLLQEVPSASSSPTKTCIEPCASTKGPLDGCEVKTGALAEPNS
QYLSPSKQSRDAAFMASDQMARVFAEVHSRVSRDSADMDSVLEQIDRSNRELGRESVDAE
EVVREIDKLLQDCRATDPVAVRK
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctccgcttggtgctttttcctctgctgggctccagccctggctttaaggaac
ctgaactactcggtgccggaggagcaaggcgccggcacggtgatcggtaacatcggccgc
gatgcccggctgcagtccgggtcgagcggcggatcgccctcgctggagcgcccccgcggc
tcgaaggccactttccgcgtgctggagaactcggctccccacttgctcgacgtggacggg
gagagcggcttgctttacaccaagcagcgcctggaccgggaggctctttgccgccggagc
tccaagtgccagctttccctcgaggtcttcgccaacgaccaggagatctgcatgatcaaa
gtggagatccaggatctcaacgacaacgcgccggctttcccttccgaccaagtcgatctg
gacatctccgagaacgccgcgccggggacccgcttcccgctggctagcgcgcacgatccc
gacgcgggcgagaacggcttgcgcacttacctgctcacccgcgacgattacggcctcttc
gccctggacgtcaaagcccgaggcgacggcaccaaattccccgagctggtggtccagaag
cctttggatcgcgaggagcagagccatcacaccttggtgctgacggccctggacggcggg
gagccgcctcgctccggcaccgtccagctcaacgtacgcttgatcgattccaacgacaac
agcccggtcttcgaggcggcttcctatgtggtggagctgcccgaaaacgtccctctgggc
acggttctcctggacctcaacgccaccgatgctgatgaaggcaccaacggccaggtgctc
tattccttcagcggttatacgcctgaccgggtgcgggagctgttcagcatcgatccccag
acgggattgatccgggtcaaaggcaacttggactacgaggaaggcaacttggtggagatt
gatgtccaggcccgtgacttgggtcccaaccccatccctgcccattgcaaggtcacagtg
catttactggaccgtaatgacaatgctcccaccattggctttgtctcggtgcgccagggg
gctctgagcgaagctgccccgccggggaccgtcattgccctggtcagggtcacagaccga
gattccggcaagaacgggcagctgcagtgccgggtgcaaggcagcgatggcagtggggga
gatggggcagtgccctttactttagaggagaactatgacaacctgtacacggtggtcacc
gacaggcccctggacagggaagtgcaggacgagtacaatgtcaccatcttggctcgggat
gggggcaacccacctctcaactctaccaagtctttctcggtcaggatcttagacgagaac
gataacccgccacgttttagcaagagcctttatgtgttgcaagtgcctgagaacaatatc
ccgggagagtatctgggatccgtgttggccaaggaccccgatctgggccaaaatggcacc
gtctcctactccattctgccgggacacgtgggggacgtctctatttacacctatgtctct
gtcaacccaaccaacggggccatctacgctttgcgcagcttcaattacgagcagaccaaa
cattttgagttccacgtgttggccaaagactcgggctctccccaccgggagagcaacgcc
accgtccgggtcactgttttggatgtcaacgacaacgcccctctgattgtcttgccggcc
ctgatcaatgacactgctgaactccaggtcccccgcaatgccggagtgggctaccccgta
ggcacagtccgggccatggataatgatttcggggaaagcggacgcctgacctatgagatt
gtggaaggcaatgaggagcacctcttcgagatggaccctacgagtggagagatccgcacc
cttcacccttactgggaagagttgagtcctgtggctgaactcgtggtgaaggtcagtgac
catggaaagcccagcctctctgcagtagccaagctgattgtccgggccttggctggacct
ctgcctgaatcaggagagccccaggtcaatggggagcagcaccgtcggcctcactgggac
ctctcgctgcccttgattgtgaccctgagcacggtttccatcatcctcctggctgccatg
atcaccattgccgtgaagtgtaaacgcgagaacaaggacatccgtacctacaactgtcgt
atagctgagtacagccaccctcagttgggtggagggggcgggggcgggggcgggggtggg
ggcagcggagggggcaagggcaagaagaagaagattagcaagaacgacatcatgctggtg
cccagcgaaggggaggacagccgagggcctctcaacgtcatgaacgtggtcagcagccca
tccttggccacctcgcccatctattttgactaccagactcgcctgccccttagctcgccc
aggtcggaggtgatgttcctgaaaccggcttccaacaacctgagcgtgccccaaggccac
gtgggatgccacaccagcttcacaggacaagggactaacgtcagcgaggttcccccaagc
cggatgtccataattcagacagacaattttcctgcagagtccaattacatgggtagcagg
caacagtttgttcaaagtagctccacgttcaaggatcccgaacgagccagtttgagagac
agtgggcacggggatagtgaccaagcagacagtgaccaagataccaacaaaggctcgtgt
tgtgacatgtcggtgagggaggcactcaagatgaaaacaacttcaaccaaaagccagccg
cttgaacaagaacaagaggagtgcattaactgcaccgatgaatgccgagtgcttggtcat
tctgacaggtgttggatgccccagttccctgcctccaaccaaacagacaacgccgactac
cgaacaaatctctttgtgcccacggtggaagccaatgtcgagactgagacttacgaaact
gtgaaccccacggggaagaagactttttgtacatttgggaaggacaagcgagagcacacc
attctcattgccaatgtgaaaccttatctcaaagccaaacgtgccctgagccctcttctc
caggaggtcccctcagcatccagcagcccaaccaagacctgcattgagccttgcgcttca
acgaaaggacctctggatggctgcgaagtcaagacaggggccctggctgagcccaacagc
cagtacctgtcacctagtaaacaatccagagacgctgccttcatggcgtccgatcagatg
gccagggtcttcgccgaggtgcattcccgagtcagccgagactccgctgatatggactct
gtcttggagcaaatagaccgttcaaacagggaactagggagagagtccgtagatgcagag
gaagttgtgcgggagatcgacaagcttttacaggactgtcgggcaaccgaccccgtggct
gtgagaaagtga
DBGET
integrated database retrieval system
