Pituophis catenifer annectens (San Diego gophersnake): 139316915
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Entry
139316915 CDS
T11059
Name
(RefSeq) CCR4-NOT transcription complex subunit 8-like
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139316915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139316915
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139316915
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139316915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
139316915
NCBI-ProteinID:
XP_070799873
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MPAALAENSQVICEGWANNLEEEMRKILSYSYIVMDKEFPGVVVRSIGEFRSSIDYQYQF
LRCNVDLLKIIQLGLTFTNEKGEYPVRINTWQFNFKFNLNGYDFGYMVKLLTDSRLPEEE
HEFFHILNLFFTSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGHLHQAGSDSLLTWGAD
IPAIPVSNDRDGRDIRMKELFFEDTIDNVKYHGRVYGLGTGVA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagcacttgctgaaaatagtcaagtgatctgtgaaggatgggcaaacaatcta
gaggaagagatgagaaaaattctcagctacagctacattgtgatggacaaagagtttcct
ggggtggttgttcgatcaattggtgaatttcgcagttctatagattatcaatatcaattt
ctccgatgtaatgttgacctgcttaaaattatccagttaggcctgaccttcacaaatgaa
aaaggagaatatcctgtaagaatcaacacctggcagtttaatttcaagttcaatcttaat
ggctatgactttggttatatggtgaaactactgacagattctaggcttcctgaagaagaa
catgagttctttcatatcctgaatcttttctttacatctatatatgatgttaagtattta
atgaagagctgcaaaaacctgaagggagggcttcaggaagttgctgaccagctagatttg
cagcgtattggtcacctgcaccaagcggggtcagattctttacttacatggggtgcagat
atccctgccatccctgtaagtaatgacagggatggcagggatatcagaatgaaagagttg
ttctttgaggatacaattgataatgtaaagtatcatgggagagtatatggccttggcaca
ggtgtagcttag
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