Pituophis catenifer annectens (San Diego gophersnake): 139317027
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Entry
139317027 CDS
T11059
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139317027 (ZC3H12C)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
139317027 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
139317027
NCBI-ProteinID:
XP_070800028
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MGLKDHLKHDLGHLYEDTSETQISAIAPWSMIEKPTMDKINSRKEDPKKELSEETGTFSC
DSKKNTNSDNELGKATKIRTEPCSLSKDHRQTYPSLEPHILKRNEILQDIKLEEVQIGTK
QIKKPPDMVKEYQTKLDFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTEADQ
SVSSINTSVMREASSVDSQRSDSPLQEDVLVDGDNLRPIVIDGSNVAMSHGNKEVFSCRG
IKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGR
RVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDD
PLGRHGPSLENFLRKKPVVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADELRA
MSRSTSAKAASEGGLVKSNSVPCSTKTDNTTDLKRTTPKRQSDPSIRTQVYQDLEEKLPT
KNKLGTRSVPSLVSIPSSAAAKPQSTAPLTNGLPSGVHFPPQDQRPQGPYSPVIMTTKNH
GTPMPYEQYPKCDSPVDVGYYSMLSAYSNLSISGPRSPERRFSLDTDYRISSVASDCSSE
GSTSCGSGDSYMGYNDRSYVSSPDPQLEENLKCQHMHSHLNSQSFLQSYHDTLTRVQSYS
HEEPKHHPKPPAPYMAMHFQHPNLGSRSTCPIDYPASQSSQHSKSMPLGRALASTRLDSV
SDSRLYDNSPLRKRKTYSAQDGLGSWDRPGYGMDTYGYRQTYSLPSNPTPPCYEQFAFQS
LPEQPDQPWQIPYCGMPQDLPRYQDSREKVYINLCNIFPPDLVRIVMKRNPHMADAQQLA
AAILVEKSQLGY
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcacttgaagcatgaccttgggcacctctatgaggatacatcagag
actcaaataagtgcaatagcaccttggtcaatgatagaaaagccaactatggataaaatt
aattctagaaaggaggatcctaagaaagaactgtctgaagaaaccggaaccttcagttgt
gattctaagaaaaatacaaattctgataatgaattgggaaaagcaactaaaattagaaca
gaaccatgctccttatctaaggatcacagacagacgtatccatctttagaaccacatata
ctaaagcgcaatgaaattttacaagacattaagttagaggaagttcagataggaactaaa
caaattaaaaagcctcctgatatggtgaaagaatatcaaaccaaacttgactttgcactt
aagttaggttactcagaagagcaagttcaacttgtgctgaataaacttggtactgatgct
ttaatcaatgatatattgggggagctggtcaaacttggaaataaaactgaggcagatcag
agtgtaagttctattaacactagtgtaatgcgagaagcatcttctgttgactctcagaga
tctgactctccccttcaggaggatgtgcttgtggatggtgacaacctgagaccaatagtt
attgatggcagcaatgtggcaatgagccatggaaacaaagaagtattctcttgtcgtggg
ataaaactggccgtggactggtttttggaaagaggacacaaagatgtcacagtgtttgtc
ccagcatggagaaaagaacagtctcgaccagatgcactcattacagatcaagaaatattg
cgtaaattggaaaaagagaaaattctggtgttcactccatcacggcgagttcaagggaga
agggtggtatgctatgacgacagattcatagtgaagttggcttttgagtcagatggtata
attgtatctaatgataactacagagatctagctaatgaaaagccagaatggaagaaattt
attgatgaacgactcctgatgtattcatttgtcaatgacaaattcatgcctccagacgat
cctctcggccgacatggcccaagtctggagaactttctgaggaagaaacctgttgtacca
gaacataagaagcaaccctgtccatatgggaagaaatgcacttatggacacaaatgcaaa
tattaccacccagaaagaggaaatcaacctcagagatcagtagctgatgaacttcgtgcc
atgtctaggagcacatctgccaaagctgctagtgaaggaggactagtgaaaagcaacagc
gttccttgtagtactaagacagataacactacagatctcaagcgaactactccaaagagg
caatcggatcctagcataaggactcaagtctaccaagacttggaagaaaagcttcccacc
aaaaataaattgggaaccaggtctgtaccttctttagttagtataccaagttctgctgct
gcaaaaccccaaagtactgcacctttaaccaatggccttccatctggagttcatttccca
cctcaggatcaaagaccacagggaccgtattctccagtaataatgacaaccaaaaaccat
ggaacgccaatgccttatgagcagtatcccaaatgtgattctcctgtggatgtaggttat
tactctatgctcagtgcatattcaaacttaagtatctctggtccccgaagtcccgaacga
cgtttctctttggacacagattacagaattagttcggtggcttctgattgtagtagtgaa
gggagtacgagttgcggcagtggcgattcctacatgggctacaacgatcgatcctatgtg
agttctcctgaccctcaactggaagagaatttaaaatgtcaacatatgcatagccatctg
aactcacaatccttcttacagagttaccacgatacgctaaccagagtgcagagttatagt
catgaagaaccaaagcatcatccgaagcctcccgctccatacatggccatgcactttcag
cacccaaacttgggaagccgttctacttgccctattgactaccctgcttctcagagttca
cagcattcaaaaagcatgcctctggggagagctcttgcatccacaagactggacagtgta
tcagactcacgtttgtatgataattctccattgagaaaaagaaaaacatactccgctcaa
gatggactcggtagttgggataggccaggctatgggatggatacatatggctatcgtcaa
acttactctttacccagcaatcccaccccgccatgttacgagcagtttgctttccaaagc
ttacctgagcaacccgatcagccttggcagataccttactgtggaatgcctcaagatctt
ccaaggtaccaagacagtcgagagaaagtctacatcaacctgtgcaacattttcccgcct
gatctggtgaggattgttatgaaaaggaatcctcacatggcagatgctcagcagcttgct
gcagccattttagtggagaagtctcagctaggttattga
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