Pituophis catenifer annectens (San Diego gophersnake): 139317173
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Entry
139317173 CDS
T11059
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139317173
Ion channels [BR:
pcae04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139317173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_3
YVC1_C
Motif
Other DBs
NCBI-GeneID:
139317173
NCBI-ProteinID:
XP_070800244
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MATEYEGISPSNWKEIVNKKLKFPEGLLAAIQDGQLVKIQQMLNVSDGILRQLDESEDRA
WREALNLAIRTGGAEITRTLLRFVKFDFRQVHEALLVAVDTNQPGVVKQLLDRLDQEKGM
KMDIKSFSMAFFDNSIDNSRFAPGVTPLTLACEKDLYEIVDMLMKKGHTISPPHKVSCAC
LECSNGRKFDLLKFSLSRINTYKGIASRAYLSIASEDPMLTAFKLSRELKWLSKKEPEFK
PDYLSLEDLCQEFAFELLGMCRNQSEVTAILNELGEGEMDDEDDGMDDQAFEEGIPNLAR
LRLAVNYNQKRFVAHPVCQQVLSSIWCGSLPSWRGSKSLWKVFISFSIFLAMPFLSLTYF
FAPKSKIGKMLKIPVLKFLLHSASYVWFLVFLLVESLILEHHHDSFKGRNQSMWETSLHM
IWVTGFFWFECKEVWIEGLRSYLLDWWNFLDIVILSMYLASFVLRLLVYLKGQVFCLDIQ
ASTPECYYYTQAKRLEWHPEDPQFMAEVLFAVTSMLSFTRLAYILPAHETLGTLQISIGK
MIDDMIRFMFIMMIILTAFLCGMNNIYVHYQESERLGSFNETFKFLFWTMMGMEEHKVVD
MPQFFVAELVGRVLYGIFTIVMVVVLLNMLIAMITNSFQKIENDADVEWKFARSKLYLSF
FREGLTLPVPFNIIPTPKSLFYAIRGCFRFMCCCKPKKSQKYPPINTISNPSVEEGGGRT
EPRLSYQRQVLKALVQRYIDTARRELEESRRKDLGNRLTELNKSVLRLHTEMKHLRQSVA
TSGVASNPMDGASVLRKYIMKVRNSFQSYEPEAGGDGQGSPVEVVVHQDVPLVMEGALPL
LREEKQGEAEGQAEGEAGVEVEEEVVDMRGG
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagtacgagggcatctcgccatccaactggaaggaaattgtcaacaagaag
ctgaagttccccgagggcctcctggctgctatccaagatgggcagctggtcaagatccag
cagatgttgaatgtcagcgacgggatcttgcggcagctggacgaaagtgaggatcgggcc
tggcgtgaggctctcaacttggccatccgcactggcggggcggagatcaccaggactttg
ttacgcttcgtgaagtttgatttccggcaagtccacgaggccctgctagtggccgtggac
accaaccagcctggtgtggtcaagcagctcctggatcggctggaccaagagaagggcatg
aagatggacatcaaatccttctccatggccttcttcgataactccattgacaactcccgt
ttcgcccccggggtgacccctctcaccttggcttgcgagaaggacctctacgagatcgtg
gacatgctgatgaagaaaggccacaccatctctcccccacacaaggtctcctgcgcctgc
ttggagtgctccaacgggcggaagtttgacctgctcaagttctcgctctcccgcatcaac
acctacaaaggcatcgccagccgggcctacctctccatcgccagcgaggaccccatgttg
actgctttcaaactcagccgggagctcaagtggctctccaagaaggaacctgagttcaag
ccagattacctgtcgctggaggacctgtgccaggagtttgcctttgagctcctgggcatg
tgccgcaaccagagcgaggtgacggccatcctgaacgagctgggggaaggcgagatggac
gatgaggacgacgggatggatgaccaggcctttgaggagggcatccccaacttggccagg
ctccgactggcggtcaactacaaccagaaacggtttgtggctcatcccgtctgccagcaa
gtcctgtcgtccatctggtgtgggagcctgcccagctggcggggcagcaaaagcctctgg
aaggtcttcatctccttctccatcttcctggccatgcccttcctgtccttgacctacttc
tttgcccccaaatccaagatcggcaaaatgctgaaaatcccggtgctcaaattcctgctg
cattcggcctcctacgtctggttcttggtcttcctgctggtggagtccctgatcctggag
caccaccacgattccttcaaggggcggaaccagagcatgtgggagacgtcccttcacatg
atctgggtgacaggcttcttctggttcgagtgcaaggaggtctggatcgaagggctgcgc
agctacctgcttgactggtggaacttcctggacattgtcatcctcagcatgtacttggct
tcctttgtgctcaggctgctggtctacctcaaaggacaagttttctgcttggacatccag
gcttctactccagagtgctactattatacccaagctaagcggctggagtggcaccctgaa
gacccccagttcatggccgaggtgctctttgctgtcaccagcatgctgagcttcacgcgc
ctggcctacatcctccctgcccacgagaccttggggacactccagatttccattgggaag
atgattgatgacatgattcgattcatgttcatcatgatgatcatcctgaccgctttcctg
tgtggcatgaacaacatctacgtccattatcaggaatcggagcgtctgggaagcttcaac
gagaccttcaagttcctcttctggacaatgatggggatggaggaacacaaagtggtggac
atgccccagttcttcgtggctgagctggtgggccgggtgctctacggcatcttcaccatc
gtcatggtggtcgtccttctcaacatgctcattgccatgatcaccaactctttccagaag
atcgagaatgacgctgacgtagagtggaaatttgcacgctcaaaactctacctgtccttc
ttcagggaaggtttaaccttgccggttcccttcaacatcatcccgacgcccaagtccctc
ttctacgccatccggggctgctttcgcttcatgtgctgttgcaaacctaagaagagtcag
aaatatccccccatcaacaccattagcaatccctcggtggaagaagggggcggccggacc
gaaccccgcctgtcttatcagcgccaggtgctgaaggctctggtgcagcgctacatcgac
acggccaggcgggagctggaggaaagccggaggaaagacctggggaaccgcctgaccgag
ttgaacaaatcggtgttgcgtctccacacagagatgaagcacctccggcagtcagtagcc
accagcggggtggccagcaaccccatggacggggccagtgtgctccgcaagtacatcatg
aaggtgcgcaacagcttccagagctacgagcccgaggcagggggcgacggccagggctcc
cccgtggaagtggtggtgcaccaggacgtgcccctcgtcatggagggtgcgctgccgttg
cttcgagaggagaagcagggtgaagcggagggccaggcagagggtgaagcgggggttgag
gtggaggaggaggtggtggacatgagggggggctga
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