Pituophis catenifer annectens (San Diego gophersnake): 139317207
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Entry
139317207 CDS
T11059
Symbol
TBC1D4
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 4
KO
K17902
TBC1 domain family member 4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139317207 (TBC1D4)
Membrane trafficking [BR:
pcae04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139317207 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
139317207 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
139317207 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
Mad3_BUB1_I
DUF2226
Motif
Other DBs
NCBI-GeneID:
139317207
NCBI-ProteinID:
XP_070800287
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
METAPFPHPLAPEPEPGPGFGPVRPGGEKRFRLFYVGCTSLDRRATLPMLPWLMAEVRRR
SQKPEPGAAPAREVLLLLGAAPTLRCVPSSPGGAPGSAVFIFEHKAQHISRFVHNSQDLT
YFAYLIKAQPDDPDSPVACHVFRATDPNQVPDVISSIRQASKAALKEDVKPNKENEDAFY
NSQKFEVLYCGKVTVAHKKAPSSLIDDCIEKFHLHERQRLKLLSEHCSAESSTDLMTWED
GPSSPLDSPFQEMEGSSGGTPGMFIVGSQTNLASLASCRTSFPERILEDSGMEEQLEFRS
RCSSAASLQRRVQENNAKPSSRRRHASAPSHVQPSDSEKNRTMLFQVGRFEINLISPDTK
SVVLEKNFKDISSCSQGIKHIDHFGFICRESSEPGISQYACYVFQCASESLVDEIMLTLK
QAFSTAAALQNAKTQVKLCEACPMHSLHKLCERIEGLYPPRAKLVIQRHLSSLSDNEQAD
IFERVQKMKPVSDQEENELLIFHLRQLCEAKQKTHIHIDETPMNASNNTIPENTTSSGRF
TLDILKNKAKKSLTSSLENIFSRGASRMRGRLGSTESFERYNHLTPDKDFSSGDSPPSTP
PASPVALAGHPFPEEDSDSPQFRRRAHTFSHPPSASRKRITFQNGRSQSVRSPLLRQNSA
EQSRLAVARRTRSESESSVPPSLPSSFSAPSFLKSLYQSSGKPASPPEGDPPRSDVEKRK
RTSSVCSSDSLNAGGLTLAPRRISWRQRIFLRVASPMKKSPSAMQLQDGCDEKELLPLSP
LPPSFDEMPLVSILQNEDVQDQTGEKKNSEELQSLWRKAIHQQILLLRMEKENQKLEASR
DELQSRKIKLDYEEVGTCQKDVINIWDKKLLNCRAKIRCDVEDIHTTLKDGVPKSRRGEI
WQFLAVQHRVRHRLPNKQQPPDISYKDLLKQLTTQQHAILVDLGRTFPTHPYFSAQLGAG
QLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPD
MMSLQIQMYQLSRLLHDYHRDLYHHLEENEIGPSLYAAPWFLTLFASQFPLGFVARIFDI
IFLQGTEVIFKVALCLLSTQEECIMSCETFEGIVEFLKNTLPDMTQPQMEKIMAQVFEMD
ISKQLHAYEVEYHVLQDELQENLSPCEEIEASEKLERANSQLKRQNMDLLEKLQVAHAKI
QGVESNLEEALRREGQMMTLIQSLEEEKALYQKALEKICSYLSQEALSDCEELLKEVNCH
PDQF
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcgcccttcccgcacccgttggctccagagcccgaaccaggtcccggtttt
ggtccggtccggccaggcggcgagaaacgtttccgactcttttacgtgggttgcaccagc
ctggaccggcgtgccacgctgcccatgttgccttggctgatggccgaagtccggcgccgg
agccagaagccagaaccgggcgcggcaccggctcgggaggtgctgctgctgctgggcgcg
gcgcccaccctgcgctgcgtgccctcttcgcccggcggcgcccccggctcggccgtcttt
atcttcgagcacaaagcccagcacatctcccgcttcgtccacaacagccaggacctcacc
tacttcgcctacctgatcaaggcgcagcccgacgaccccgactcgcccgtcgcctgccac
gtcttccgggctaccgaccccaaccaggttccagatgtcatcagtagcataagacaggct
tccaaagcggccctcaaagaagacgtcaagcccaataaagaaaatgaagatgccttctac
aactcccaaaaatttgaggtgctgtattgtgggaaggtgacggtggcccacaaaaaggcc
ccttcctccctcattgatgactgcatcgaaaagttccacctccatgaacgtcagcgccta
aaactgctcagtgagcactgcagtgctgagtccagcacggacctcatgacatgggaagat
ggcccctcttcccccttggacagtccatttcaggagatggaaggttccagcggaggcacc
ccggggatgttcatcgtggggagccagaccaacctggccagtttggccagttgccggacc
tctttcccagagcggatcctggaggactcgggaatggaggagcagctggaatttcgctct
cgctgcagcagcgctgccagcctgcaaaggagagttcaggagaataacgccaagccttca
tcccgaaggcgccatgccagcgccccgagccacgtccagccctccgactctgaaaaaaac
aggacaatgttgtttcaggttggtcgatttgaaattaacctcatcagtccagacaccaaa
tcagttgtgttggagaagaacttcaaagacatctcctcctgttctcagggtataaagcac
atcgatcattttggttttatatgtcgggaatccagtgaacctggaataagccagtatgct
tgctatgtcttccagtgtgctagcgaatctctggtggatgagatcatgctgaccttgaag
caagcctttagcacggcagctgccctgcagaatgccaaaactcaggtcaaactgtgtgag
gcctgcccgatgcactccctccacaagctgtgcgaaaggattgaaggactttatccacca
agagccaagcttgtaattcagaggcacctgtcctctctcagcgacaatgagcaggcggac
atctttgagcgcgttcagaaaatgaagccggttagtgaccaggaagaaaacgagctgctg
attttccacctgcgccagttgtgcgaggcaaagcaaaagacccacattcacattgatgag
accccaatgaacgcgtctaataatacaatcccagaaaacaccaccagcagtggaagattc
accctggatatcctgaagaacaaagccaagaaatccttaaccagctctctcgaaaacatc
ttctccaggggagccagtcgcatgcgtggtcgcctggggagcacggagagctttgaaagg
tacaaccacctcactcctgacaaagacttctcctcgggggactccccaccttccacacct
ccggcgtctcccgttgccttggccggacacccgtttcctgaagaggactccgactctccc
cagttcaggagacgcgcccatacttttagccacccgccctctgcctccaggaagaggatc
actttccagaatggacggtctcaaagcgtccggtcgcccctcctgaggcaaaactcggcc
gaacagagcaggctggcagttgcccgacgtacccgcagcgagagtgagtcttcggtgccg
cccagtctcccatcttctttctctgccccttctttcctgaaaagcttgtaccagagctct
gggaaaccagcttctccgcctgaaggtgatccccccaggagcgatgtggagaaaaggaag
aggacttcctcggtgtgcagcagcgactctctaaatgctggtggtctcaccctggctccc
cgtcggatctcctggcggcagaggatcttcctaagggtggcatcacccatgaagaagtct
ccttcggccatgcagcttcaagatggctgtgatgaaaaagaactgctgccattatcgccg
cttccaccatcttttgacgaaatgcccctggtttccatcttgcaaaacgaggatgtccaa
gaccagaccggagagaagaagaactcggaggagctgcagagcctgtggagaaaagcaatc
caccagcagatccttctccttcggatggagaaggaaaaccaaaaactggaagcgagcaga
gatgagctccaatccaggaaaattaagctggactatgaggaagttggaacctgtcagaag
gatgtcattaacatctgggacaagaaactgctgaattgcagagccaagatcagatgtgat
gtggaagacattcataccaccctgaaagatggtgtccccaaaagccgccggggagaaatt
tggcagtttctggccgtgcagcaccgcgtcagacaccggctcccaaataagcaacagcct
cccgacatctcctacaaagatctcttgaagcaactgacaacgcaacaacatgccatcctg
gtggacctgggaaggactttccccacccatccctacttttcggctcaactgggcgcagga
cagctctcgctcttcaacctgctgaaagcctactccttgctggacaaggaagtgggctat
tgtcaaggcatcagtttcgtggccggcgtgctgctcctccacatgagtgaagagcaagcc
ttcgaaatgctgaaattcctcatgtatgacctcggattccggaaacagtacaggcccgac
atgatgtcactgcagatccagatgtaccagctgtcaaggctgcttcatgattatcatcgg
gatctttaccaccatcttgaagaaaacgaaatcggcccaagtctgtatgctgcaccctgg
tttctcactttatttgcctcgcaatttcccctgggatttgtagccagaatctttgatatt
atttttcttcaaggtacagaagtcatatttaaggtagcactatgcctgcttagcacccag
gaggaatgcatcatgtcgtgtgagacatttgaaggcattgttgaatttcttaagaacact
ctccccgacatgacacagccccagatggagaagataatggcccaggtatttgagatggac
atttccaaacagcttcatgcctacgaggtggagtaccatgttctgcaggacgaattgcaa
gagaacctgagcccttgtgaggagattgaagcttcagagaaacttgaaagggccaacagt
cagctgaagagacaaaatatggatctcttggagaaacttcaggtggcccatgctaagatc
caaggcgtggaatccaacctggaagaggccttgagaagggagggccagatgatgacttta
atccagtccctggaagaggagaaggctctatatcagaaggccctggagaagatctgcagc
tacctgtcccaagaggccctgtctgactgtgaagagctgctgaaagaagtcaactgtcat
ccagaccaattctag
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