Pituophis catenifer annectens (San Diego gophersnake): 139317221
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Entry
139317221 CDS
T11059
Symbol
BCOR
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139317221 (BCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139317221 (BCOR)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
139317221 (BCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
139317221
NCBI-ProteinID:
XP_070800317
LinkDB
All DBs
Position
Unknown
AA seq
1722 aa
AA seq
DB search
MLSATPLYGNVHSWMSSERVRMCGINEERKIPVNDGDVLKSRLELREENHLNHSVVDTTA
VHHIDSLAALTMDRSGLMREGLRVPSSIVYSNLCGLGSDKTRDATSAIAGLGFGPERNSE
IQFKSNPTEAIENGAGKNPNGFSALYKTPPGIQKSSVPTGETLGLDRSSSDKQSPLSVNG
ASYLRLPWVNPYMEGAIYPFLDSPNKYSLNMYKALLPQQSNFSLPQHVTYSPVCTNGERF
LYLPPSHYVAPHIPSSLASPMRISATSASPAIPPLGHCPDKGLSWKMGVSPANPIDSHTY
PHIQNSKPPRVPSGKPAANNMPTDPSILLSHSPRPSPRMHLPTQVGDTYSEFHKHFSRIS
TSPSSIALPKPYMNVSSEFSSRVSNGKAPKTHDPNEISQQPAVHARKTGHDRKDSRSPPL
LEKQQTITKDIIDKPLDLSSKVVDAEITKSDNVKKMVPTVLVHSRAGGGLVLPGGDLTKE
TISPGNGCPIYRPEIISTAPSSWVVPGPASNEENGGKNILLKNKNPGWVTPQQRSSSCPR
MGGMETVINNTSGSLSTEGRPASASPAPNANADCPKTNISVETTASVIQHIGQPSVSLSL
SSSLSLSSSPPSKHGNKAAKCNNQEPMFKANENTLAPGSIFFSSNDAFRSPPLPYPRSYL
PYPIPDGLALGPLSLHGKGPVYPHPVLLPSGSLFSGHLAPKPTIPYSLPTSSGDFVTYQD
ALGMGMVHPMLLSHAALELKDDKSERRSRSHERLHYEDPALRNRLPEMLETSTKLHFEIP
TERNVKSHQSSSHNKNSTKSDKLMFAELRDEQDAKGETGLTNPNFPIENSNQTNDPTKHK
VEEAFQHRDFIVMREECGRNNFHEVYNFKQVQNPHPSIFNLRKDDFSASHNRERLTIPPS
VFLETAHGNDDLAMSFCKMPDDAKQLCMGNAQSSVEINQTYAKDGIEGMESNDGKLLKPK
PSKLAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCER
AMMRFSELEMKEREGHVATKDSEICRFNQAEWENLKGNNEKKPNSVPSEDVIAGPNDKSR
CYFHDTDNIHDQSSEIPEDKSSPADICLERFTVYEKTNDQYLEDRSQLPCPHLDRKRKHS
DENMQNDGTPKENFVEELEEEFASKAKKKKTSKDDWPEREMTNNSSNHLEEPNCNEVTNL
KVCIELTGLHPKKQRHLQHLRELWEQQVSPERSPPGKLGRQSRKDLAEAVQPEATAKVKD
CTEERHTKKRSEVKSNRSWSEESLRTSDNEPGIPLFPVSSHMKNLSTNINSKRQTQPSYT
LTSRLAAKQQKIKENWKTDGLCLDEEEDFQAASLLQKHSECEKPPGKRQCKTKHLALQER
RTRSSLTGDDITDIESIEEKPSQLQIASTPQEIAPSRPMPPEARRLIVNKNAGETLLQRA
ARLGYEEVVLYCLENKVCDANHRDNAGYCALHEACARGWLSIVRHLLEYGADVNCSAQDG
TRPIHDAVENDHLEIVRLLLSYGADPTLATYSGRTIVKMTHSELMETFLTEYLTDLQGRD
LDDPGLSWDFYGSSVCEPKGESGFDILSNPPGPNDEDEDGFSDIFEFEFSDVSLLPCYNI
QVSLSQGPRNWFLLSDVAKRLKMSPRIFRCSFPSLEVVSVIEAEFFKQVSLSQLFACQKD
LEAFNPEGKELLDLVEFSNELQSLLGASLEWLHPDEEIDINW
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaactcccctgtatggcaatgttcatagctggatgagcagtgagagggtc
cgcatgtgtggaattaatgaagaaaggaaaatccctgtaaatgatggagatgtcttgaaa
agcaggctggaattaagagaagaaaatcacctgaaccacagtgtggtggatacaacggct
gtgcatcacattgacagccttgcagctctgactatggatcgttctggacttatgcgggaa
ggacttagagtccccagtagtattgtctattccaatttatgtggacttggctcagacaag
acccgggatgctacaagtgctattgctggccttggatttggtcctgaaaggaactcagag
atacagttcaagtctaatcccactgaagcaattgaaaatggagctggaaagaacccaaat
ggcttcagtgctctttacaaaacaccacctggaatacaaaagagttctgttccaactggg
gagaccttaggcttggacagaagctcaagtgataaacaaagtcctctcagtgtcaatggt
gctagttacctaaggctaccctgggtaaatccttatatggagggtgctatttatcctttt
cttgactcaccaaataagtattcattgaatatgtataaggctttgctacctcagcagtcc
aattttagcttgccacagcatgtgacttattcgcctgtatgtacaaatggtgaacgtttt
ttatacttgccaccttctcactatgttgctccccacattccatcatcattagcttcaccg
atgaggatttcggctacatcagcatcccctgcaattccccctttgggacactgtccagat
aaaggcttatcttggaagatgggagtgagtccagcaaatcccatagattctcatacctat
ccacatattcagaatagtaaaccacccagagttccctctggtaaaccagctgctaataat
atgccaactgatccttctattttgttgtcacattctccaaggccatcacctagaatgcat
ctcccaacacaggttggagatacttactcagagttccataaacacttttccagaatttca
acttctccttcttcaattgccctccccaagccatacatgaatgtaagcagtgaattttct
tccagagtctcaaatgggaaagctcccaaaacacatgatccaaatgaaatttctcagcaa
cctgcagtgcatgcaaggaaaacaggccatgaccggaaagatagcaggtcccctccatta
ttagaaaagcagcaaactattaccaaagatatcattgacaaacccctggatttgtcatca
aaagttgttgatgcagaaataaccaagtctgataatgttaagaaaatggtaccaactgtg
ctagttcatagcagggctggaggaggattggttttacctggaggtgatcttacaaaagaa
actatttctcctggaaatggttgtcctatctacagacctgagataattagcactgcacct
tcctcctgggtggttcctggtccagcttctaatgaagagaatggtggcaaaaacattctg
ttgaaaaacaaaaaccctggctgggtaacacctcaacaacgaagttcttcttgccctagg
atgggaggcatggaaacagtaattaataatacttcaggatctttgtcaactgaaggtcgc
ccagcatctgcttctccagctccaaatgctaatgcagattgtcccaaaactaacatttct
gtagaaaccactgcatctgtcatacagcatataggacaaccttcagtatcattatcatta
tcatcgtcattgtcactgtcatcatcaccaccatcaaagcatggtaataaggcagctaaa
tgcaataaccaagaacctatgttcaaagcaaatgaaaacactcttgctccaggttccata
tttttttcttcaaatgacgcattccgatctccaccactgccctatccaagaagctatctc
ccatatccaattccagatggtttagcattaggtcctttgtctctacatggaaaaggacct
gtgtatcctcatccggttttgttacctagtggcagtcttttctctggacatttggctcct
aaacctactattccatacagtttaccaactagcagtggtgactttgtgacatatcaagat
gcactgggtatgggaatggtgcatccaatgttgttatcccatgcagctcttgagctaaaa
gatgataaatcagaaaggagatctagatcacatgagaggctccattatgaagaccctgct
ctaagaaacagattgccagagatgctagaaaccagcacaaagttacactttgaaataccc
acagagagaaatgtgaaatcacaccaaagttcaagtcataataaaaatagtaccaaaagt
gataaacttatgtttgcagaattgagagatgagcaagatgcaaaaggtgaaactggtctg
acaaatccgaattttcctattgaaaatagtaatcaaacaaatgaccctacaaagcacaag
gtggaagaagcctttcagcatagagattttattgtaatgagagaagaatgtgggagaaat
aatttccatgaagtgtacaactttaagcaagttcagaatccacacccatcaatcttcaat
ttaaggaaagatgatttctcagcaagccataatagagagagattgactattcccccttct
gtgttcctggagactgctcatgggaatgatgacttggctatgtctttttgtaaaatgcca
gatgatgccaaacagctttgtatgggaaatgcacagtcaagtgttgaaatcaatcagaca
tatgccaaagatgggattgagggtatggaatctaatgatggcaaactcttgaaacctaag
ccatctaagctggcaaagagaatagcaaactctgctggttatgtaggtgaccgattcaag
tgtgttacaactgaactgtatgcagattctagtcaactgagtcgagaacaacgggccttg
cagatggaaggattacaagaggacagtattttatgtctacctgctgcttactgtgagcgt
gcaatgatgcgcttctcagagttggagatgaaagagagagaaggccatgtagcaaccaaa
gactcagagatctgccgattcaaccaagcagagtgggaaaacttgaaaggaaataatgag
aaaaagcctaactctgtcccttcggaagatgtcattgctgggccaaatgacaaaagcaga
tgctattttcatgacacagacaatatccatgatcagagttctgaaattcctgaggacaaa
agttctcctgcagatatttgtttggagagatttactgtgtatgaaaagacaaatgaccaa
tatttagaagatagaagccagcttccgtgcccacatctggaccgaaaacgtaaacattct
gatgagaacatgcagaatgatggaacccctaaagaaaactttgtagaagaactggaagaa
gaatttgcatcaaaagcaaaaaagaagaagacctctaaagatgactggcctgagagggaa
atgacaaacaattcctctaaccacttagaagagcccaattgtaatgaggtgaccaacctg
aaggtgtgcattgaattaacagggcttcatccaaaaaagcagcgtcacctgcagcatctt
agggaactatgggagcagcaggtatcaccagagagatccccgcccggcaagttgggccgg
caaagcaggaaagatttagctgaggctgttcagccagaggccactgcaaaggtcaaagac
tgcacagaagaaaggcacaccaagaaaaggtcagaggtcaaaagcaatagaagttggtct
gaagagtccctcagaacaagtgacaatgaaccaggtatccctctgttcccagtgtcctca
catatgaagaatctctccaccaatataaacagcaaaaggcaaactcagccaagctatact
ttgacttcaaggttggctgccaagcagcagaaaattaaagaaaactggaagacagatggg
ctgtgcttggatgaagaagaggattttcaggctgcatccctgttgcagaaacacagcgag
tgtgagaagccgccagggaaacgtcagtgtaaaacaaaacatttggcactgcaggagagg
agaacaaggtcatccttgactggagatgacataacagatattgaaagcattgaggagaag
ccctcacagctgcagattgcaagtacacctcaggagattgccccaagtcgtcccatgccc
ccagaagctcgaagacttattgtcaataagaatgctggagaaacacttctgcaaagggca
gcacgactgggatatgaggaagtggttctatattgtttggaaaacaaagtctgtgatgca
aatcatcgtgacaatgctggttattgtgccctacatgaggcctgtgccagaggttggctg
agcattgtgcgacatctcctagaatatggagcagacgtcaactgcagtgctcaggatgga
actaggcctatccatgatgccgtggaaaatgatcacctagaaattgtccgattgctcctt
tcttatggcgctgaccctacgcttgctacatactcaggtagaacaattgtgaaaatgaca
cacagtgaactaatggagacttttctaacagaatatttaactgatctccaaggtcgtgat
cttgatgaccctggcttgtcctgggacttctatggcagctctgtgtgtgagccaaaaggc
gaatcaggatttgacattctgtctaatccacctggcccaaatgatgaagatgaagatgga
tttagtgatatctttgagtttgaattctcagatgtgtctctcttgccatgttataacatc
caagtgtctctttctcaaggaccacggaactggtttttgctctctgatgtagccaagagg
ctgaaaatgtcacccaggatatttcgctgcagtttcccaagtttggaagttgtcagtgtt
atagaagcagaatttttcaaacaggtatctttgagtcagctgtttgcttgccaaaaggat
cttgaagctttcaacccagaaggcaaggaactgttggacttggtagaattttctaatgaa
ttacaatctttgcttggagcctcacttgaatggttgcatccagatgaagaaattgatatt
aattggtga
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