Pituophis catenifer annectens (San Diego gophersnake): 139317444
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Entry
139317444 CDS
T11059
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04514
Cell adhesion molecule (CAM) interaction
pcae04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139317444 (LRRC4B)
04517 IgSF CAM signaling
139317444 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139317444 (LRRC4B)
Cell adhesion molecules [BR:
pcae04515
]
Immunoglobulin superfamily
NGL family
139317444 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
DUF7617
Insulin_TMD
LRR_RPS2
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
139317444
NCBI-ProteinID:
XP_070800607
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MATLCCIQKPWLAPRISRMIWKHLVLVSMWLPSFVLGGASPISCPAACSCSNQASRVICT
RQELVEVPDSISINTRYLNLQDNNIQVIKTDTFKHLRHLEILQLSKNLIRKIDVGAFNGL
LNLNTLELFDNQLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK
KLEYISEAAFEGLVNLRYLNLGMCNFKDIPNLTALVRLEELELSGNRLDMIQPGSFQGLT
SLCKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPW
HCNCDVLWLSWWLKETVPNNTTCCARCHAPPNLKGRYIGELDQSHFTCYAPVIVEPPTDL
NVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQ
YTCMVTNSAGNTTASATLNVSAVDPATTGYTYFTTVTVETMDSGQEESIHTEKEPRPTPS
QGWGMTYSTTSLTPRSTHSTEKPFTIPITDVTESGMKDLDDVMKTTKIIIGCFVAITFMA
AVMLIVFYKLRKQHQLHKHHGPTRTIEIINVEDELPAAAGAPGDSHLVLPAIEHDHLNHY
TAFKAHYNNNSGGGPLTCSKNPMLNSIHEPLLFKSSSKENVQETQI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctctgctgcattcagaagccttggctagcccccagaatctctagaatgatt
tggaaacatcttgttctcgtctccatgtggctgccatcatttgttttgggtggagcctcc
cccatctcctgcccagctgcctgttcctgcagcaaccaggccagccgggtcatttgtacg
cgccaggagctggtggaagtgcctgacagcatttcaatcaacacacggtacctcaatctg
caggataacaacatccaggtgattaagactgacactttcaagcaccttcgtcatcttgag
attttacaactcagcaagaacctcatccgaaagattgacgttggtgccttcaatggtttg
ctcaacctcaacacactggagctctttgacaaccaactaaccactgtccccacacaggcc
tttgagtacctctccaaattgcgggagctatggctgaggaataatcccattgaaagcatc
ccatcatatgccttcaatcgagttccttctttgcggcgcctggaccttggagagctcaag
aagctggagtatatctcagaagcagcttttgaaggcttggtcaatttaaggtacctgaac
ttgggcatgtgcaactttaaggatatcccaaatttgacagccttagtgcggctagaagaa
cttgagctttctgggaatcgcctggacatgatccaaccaggctccttccaaggtctgact
agcctttgcaagttgtggttgatgcatgcacaagtggccaccattgaacgtaatgctttt
gatgaccttaagtcattggaggagctcaatctctcccacaataacctgatgtccttgccc
catgatctgtttacccctttgcaccgcctagagcgtgtgcacctcaaccacaatccttgg
cattgcaattgtgatgtgttgtggctcagctggtggctcaaggagacagtgcccaacaac
actacctgctgtgccagatgccatgccccaccaaacctcaaaggacgatatattggagag
ctggatcaaagtcattttacttgctatgcccctgttatagtggagcctccaactgatctt
aatgtgactgagggaatggctgctgaattaaagtgccgaacagggacctccatgacatca
gttaactggctgacacccaatggcacactgatgacacatggttcctatcgggtgcgcatt
tctgtccttcatgatggcacactcaacttcaccaatgtgacagtccaagacactggccag
tatacctgcatggtgactaattcagctggcaacaccactgcttcagccacactcaatgtt
tcagctgtggatccagccactacaggttatacctacttcactactgtaactgtggagacc
atggattctggccaagaagaatcaattcacacagagaaggaacctaggccaacaccttcc
caagggtggggcatgacttattccactacttcactgactcctcgcagcacacacagcact
gagaagccattcactatcccaatcactgatgtcacagagagtggcatgaaagatttggat
gatgtgatgaaaactactaagatcatcattggctgctttgtagccattaccttcatggct
gctgtgatgctcattgtcttctacaagctccgtaaacagcaccagcttcataagcatcat
ggtcctacccgcaccattgagatcatcaatgttgaagatgagctgcctgcagcagctgga
gctcctggtgatagccaccttgtgcttcctgccattgagcatgaccacctcaaccactat
actgctttcaaggcccactacaacaacaatagtggtggtggacccctcacatgctccaag
aaccctatgctcaattccatccatgaacctcttttattcaagagcagctctaaagaaaat
gttcaagagacacagatatga
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