Pituophis catenifer annectens (San Diego gophersnake): 139317797
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Entry
139317797 CDS
T11059
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03018
RNA degradation
pcae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139317797 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
139317797 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139317797 (LSM7)
03041 Spliceosome [BR:
pcae03041
]
139317797 (LSM7)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139317797 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
139317797 (LSM7)
Spliceosome [BR:
pcae03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139317797 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
139317797
NCBI-ProteinID:
XP_070800980
LinkDB
All DBs
Position
Unknown
AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggagaagaagaagaaggagagcatcttggacctctccaagtacatcgac
aagaccatccgcgtgaagttccagggcggccgggaagccagcggcgtcctgaaaggcttc
gacccgctgctcaacctggtgctggacggcaccatcgaatacatgagagatccggatgac
cagtacaaactcacggaagacacccgccagctgggcctggtggtctgcagagggacctcc
gtggtcctcatctgcccgcaggacgggatggaagccattccgaaccccttcattcagcag
caagatggctag
DBGET
integrated database retrieval system
