Pituophis catenifer annectens (San Diego gophersnake): 139318001
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Entry
139318001 CDS
T11059
Symbol
LHX1
Name
(RefSeq) LIM/homeobox protein Lhx1
KO
K09372
LIM homeobox protein 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139318001 (LHX1)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
139318001 (LHX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
139318001
NCBI-ProteinID:
XP_070801339
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG
TKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLN
NSNSAKENSLHSATTGSDPSLSPDSQDPSQDDAKDLESANISDKEVGSNENDDQNLGAKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLVDRLEPGELIPNGPFSFYGDYQSEYYGPGSNYDFFPQGP
PSSQAQTPVDLPFVPSSGPSGTPLGGMDHPLPGHHPSSEAQRFTDIMSHPPGDSPSPEPN
LPGSLHSMSAEVFGPSPPFSSISVNGGGNYGNHLSHPPEMNEAVVW
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggttcactgcgccggctgcaaaagacccatcctggaccgcttcctgctcaacgtcctg
gaccgggcttggcacgtgaaatgcgtccagtgctgcgaatgtaaatgtaacttgacggag
aaatgcttttccagagaaggaaaactctactgtaaaaacgacttctttaggtgttttggt
accaagtgtgccggctgtgcgcagggcatctctccgagcgatttggtccggagggccaga
agcaaagtctttcatttgaactgtttcacttgcatgatgtgcaacaaacaactgtccacc
ggcgaggaactttatatcatcgacgagaacaaatttgtctgcaaagaagattatctgaac
aacagcaactctgccaaagagaacagtttgcactcagctacaactggtagcgaccccagc
ctgtccccggattcgcaggaccccagtcaggatgacgccaaggacttggaaagcgccaat
atctccgacaaggaggtgggcagtaatgagaacgacgaccaaaacctgggggccaaacgg
agagggccccgcaccaccatcaaagccaagcaactggagaccctcaaagcagcctttgcc
gccactcccaaacccacccggcacatccgtgaacagctggcacaggagaccggccttaac
atgcgcgtcatccaggtgtggttccagaaccggcgttctaaggaaaggcgcatgaaacag
ctgagcgcacttggagcccgcaggcacgcgtttttccgcagcccccgccgcatgagaccg
ctggtggaccgtttggagcccggcgaactcattcccaacgggccgttttctttctatgga
gattatcagagtgaatattatggacccggaagcaattatgattttttcccgcaaggacct
ccatcttcccaagcgcagaccccagtggatctccccttcgtaccctcctcaggaccatca
gggaccccacttggggggatggaccatcctttacctggacatcacccttccagcgaagct
cagcgtttcacagacatcatgtcccaccctcccggagactcacctagtccagaacccaat
ttacctggctccttgcactccatgtcagcagaagtctttggaccaagccctccattttca
tccatatcggtcaacggaggtggtaactacggtaaccacttgtcgcatccgccggaaatg
aatgaggctgttgtatggtag
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