KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139318163
Entry
139318163         CDS       T11059                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139318163 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcae03021]
    139318163 (TAF5)
   03036 Chromosome and associated proteins [BR:pcae03036]
    139318163 (TAF5)
Transcription machinery [BR:pcae03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     139318163 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     139318163 (TAF5)
Chromosome and associated proteins [BR:pcae03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     139318163 (TAF5)
    STAGA complex
     139318163 (TAF5)
    TFTC complex
     139318163 (TAF5)
    SAGA complex
     139318163 (TAF5)
    SLIK complex
     139318163 (TAF5)
SSDB
Motif
Pfam: WD40 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_DCAF12 WD_LRWD1 Beta-prop_Nup120_160 Beta-prop_SPT8 eIF2A CDK5RAP3 Cytochrom_D1 VPS8_N Beta-prop_WDR35_TULP_N RAB3GAP2_N
Other DBs
NCBI-GeneID: 139318163
NCBI-ProteinID: XP_070801565
LinkDB
Position
Unknown
AA seq 802 aa
MAALPEEPTEAVAVKPDPDAGAPPPAPPAPLSQSPISTAAAVATTVPPASASSVAATLLA
DGEPLAGGVDSKSSGTSSPTPPASQLPIHKHTLLAVLQFLRRSNLRESEEILRREARGLV
DDVPSDPNSSAPGVPGAHGGEGQDPSAGILAPGAGDVLINSVTFGQTGATISPAAITTPP
AAPLGHPGKAGVLVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIECALDCHRAELSQ
LFYPLFVHMYLELVYNGHENEAKSFFQKFHGDQECYYQDDLRVLSSLTKKEHMRGNETML
DFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGS
LAGEAKREANKAKVFFGLLKEPEIELPLDDEDEEGENEEGKPKKKKPKKDSLGSKSKKQD
PNAPPQNRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAVDV
TDDSSMIVGGFADSTVRVWSVTPKKLRSVKSATDLSVIDKESDDVLERIMDEKTASELKI
LYGHSGPVYGASFSPDRNYLLSCSEDGTIRLWSLLTFSCLVGYKGHNYPVWDTQFSPYGY
YFVSGGHDRVSRLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLN
GNCVRIFTGHKGPVNSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHSDTIYALK
FSRDGEILASGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPESSQDLLLGTYMTKST
PVLHLHFTRRNLLLAAGAYSPQ
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggctgctttgccggaggagccgacggaggcagtagcggtaaagccggatcctgatgca
ggagcgccgccgcccgctccgcccgctcctctctcccagtccccgatctcgacggcggca
gcagttgcaacaactgtccctcctgcgtctgcctcttcggtcgctgccacccttctcgcg
gatggagagccgcttgcgggaggagttgactcgaagagctcggggacttccagccccacg
ccgccagcctctcaactacccatccacaagcatactctgctggcggtgctgcagttcttg
cgccgcagcaatctgcgcgaatcggaggagatcctccggagggaagcccggggtctcgtc
gacgacgtcccgagcgacccgaattcctcagctcccggggtccccggagctcatggaggg
gaaggacaggatcccagtgccgggatcttggcccctggagcgggggacgtgctaatcaat
tctgtcacttttggccagactggagctaccatctctccagccgctatcacgacacctccc
gcagcgcccttgggccatcctgggaaagccggagttcttgtagaagatcagccagatgtg
agtgcagtactatctgcttataatcaacagggagacccagcactttatgaagaatactac
agtggattgaaacacttcattgaatgtgctctggattgtcatcgagctgaattatcacaa
cttttttatcctctgtttgtacacatgtacttggaactagtctacaatggacatgaaaat
gaagcaaaatcgttctttcaaaagtttcatggggaccaagaatgttattaccaagatgac
ttgcgtgtattatccagtttaaccaaaaaagagcatatgaggggcaatgagactatgctg
gatttccgaacaagcaagtttgtgttgcgtatttctcgtgactcttaccagcttctgaag
agacatcttcaggaaaaacagaacaatcagatctggaacattgttcaagaacatctttat
attgatatttttgatggaatgcctcgtagtaaacaacagattgatgctatggtgggaagt
ttagctggcgaagcaaaacgagaagcaaataaagcaaaggtattttttggcttattaaaa
gaaccagaaatagagttacctttggatgatgaagatgaagaaggagagaatgaagagggc
aagccaaagaaaaagaagcccaaaaaagatagtttgggatcaaaaagtaaaaagcaggat
ccaaatgctccacctcagaatagaatccctcttcctgagctaaaagattctgataaactg
gataaaataatgaatatgaaggaagctactaaacgtgttcggcttggtccagactgtttg
ccttctatttgcttctacacatttcttaatgcataccagggtcttacagctgtggatgtt
acagatgactctagcatgatcgttggaggctttgctgattccactgtcagggtatggtct
gtgacacccaaaaagcttcgcagtgtaaaatcagctacagatctcagtgtcatagataaa
gaatctgatgatgttttagaaagaatcatggatgaaaaaacagcaagtgaattgaaaatt
ttatatggtcatagtggacctgtctatggtgctagctttagtcctgataggaactatttg
ctgtcatgttcagaggatggcacaatcagattgtggagtcttctaactttttcttgtttg
gtgggatacaaaggacataattatcctgtatgggacacacagttttctccatatggatat
tattttgtatctggtggccatgacagagtatctcgtttgtgggctacagatcactatcag
cctttgcggatctttgctggtcatctggcagatgtcacatgtacacgttttcacccaaac
tccaactacattgccacaggctcagcagacagaactgtgaggctttgggatgtacttaat
ggaaactgtgtacgaatattcacgggacataagggaccagttaattcattagcattttct
cctaatggacgattcttggcaactggagcaactgatggaagagtgcttctgtgggatatt
ggccatggtttaatggtaggagagttaaaagggcactcagacacaatttatgcactcaaa
ttcagtagagatggagaaatcttagcttcaggttcaatggacaatacagttaaactttgg
gatgctgtgaaagcttttgaggacttggagacagatgattttacaacagccactggacac
ataaaccttcctgaaagttcacaggacttgcttctgggcacatatatgaccaaatcaact
ccagttttacacctccactttactcgaagaaatttacttcttgctgctggggcttatagt
cctcagtaa

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