Pituophis catenifer annectens (San Diego gophersnake): 139318181
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Entry
139318181 CDS
T11059
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139318181 (BTAF1)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139318181 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_2
HEAT_GCN1_C
HEAT_MROH2B_C
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_GCN1
HEAT_EZ
ARM_ECM29
ARM_TBCD_2nd
DUF3932
Motif
Other DBs
NCBI-GeneID:
139318181
NCBI-ProteinID:
XP_070801599
LinkDB
All DBs
Position
Unknown
AA seq
1845 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLAKVLVHLRSTNWDSRI
AAGQAVEAIVKNIPEWNPTPQPKQERGCENQVEDTSTSDRLRFDKFDICRLLKHGASLLG
SAGAEFEVQDDTSGEVDPKERIARQRKLLQKKLGLDMGAAIGMSTEDLFNDEDLDYTPAS
SILVHKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSKDAVETNEKSNDSTDG
EPEEKRRKIGNVIISQPATDSKLLVDNVPEESNDWPLESFCEEVCNDLFDPSWEIRHGAG
VGLREVLKAHGKSGGKMGDSTVEEMIQQHQDWLEDLAIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNESGVHKTVSILLKLLTQEQWEVRHGGLLGIKYALAVRQDLIET
LLPKVLPAITEGLQDLDDDVRAVAAASLVPVVESLVHLQPEKVSFILNILWDALLDLDDL
TASTNSIMTLLSSLLTYSQVQRCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQTSASWLTPILQDMLRHIFQFCILESNQEILELIHKVWLELLSKASLQYVVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKAKLKEKSGGKLRPCQPQTKEVVQEYIAGAESVTED
PATRDFVVMRARMMAAKLLGALCCCICDPSVNAASQEIKPAESLAQLLLFHLNSKSALQR
FSVALVICEWAALQKENKIVADAVLSRLLGVLSEHLYYDEIAVPFTRMQNECKQLISSFT
DANIDISSKVNCSVFTIDQANELVTTVFNEATSFQNLNPKVLQQLESKRQQVQMTVTETN
LEWQTLQLRVHTFTACAVVNLEQLPEKINPVIKPLMEAVKKEENTLVQNYSALCIAKLLQ
QCIARSPCPNSKIIKNLCTSLCVDPHLTPLASCPAQPQSSHENSKGSNSERDGMHHTVTK
HRGIITLYRHQKAAFAITSRRGPTPKATKAQIGDLPASTSGNVTAELDEAQKPYIVQRRG
AEFALSTIAKHFGDEMAVGLPHLWDTMVGSLKNSIDINNFDRKLLLEKGDGPAQELVNSL
QVFEITAASMDIRLHTLLIQHLPYLCMCLQHPSTAVRHMAARCVGVMSKIATVETIHIFL
EKVLPWLGAIDDSTKQEGAIEALGAIMEQLDVGIIPYIVLLVVPVLGRMSDQTDSVRFMA
TQCFATLIRLMPLEAGIPDPPNMSEDLIKIKAKERHFLEQLLDGKKLENYKIPVPIKAEL
RKYQQEGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYARTKMADSIP
LPSLVVCPPTLTGHWVDEVGKFCSKEFLNPLHYTGPPTERARLQHHVKRHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCILSSLQVQLYEDFAKSRAKCDVDETVSAASLTEETEKPKLKATG
HVFQALQYLRKLCNHPALVLTPHHPEHKRITEKLAAENSSLRDIQHAPKLSALKQLLLDC
GLGNGGSPESGTETIVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMKDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENTSLQSMGTDQLLDLFTLDKDGKT
EKSDGATSVSGKTTIKSVLENLGELWDQEQYDSEYSLEKFMHSLK
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccaggcttgatcgcctctttatcttactggacactggcacaacaccggta
acaaggaaagcagctgcccagcaacttggggaagttgtcaaacttcatccacatgaattg
aataatctcctggctaaggtattggtacacttaaggagtacaaactgggattcccgcatt
gcagctggacaagctgtggaagccatagtaaaaaatataccggaatggaatccaactcca
cagccaaagcaagaacgtggctgtgaaaatcaggtggaagacacctctacttctgatcgg
ttgcgttttgacaaatttgatatttgtcgacttttaaagcatggcgcttctcttcttggg
tctgctggtgctgaatttgaagttcaggatgatacatctggtgaagtggatccaaaagaa
agaatagctcgacaaaggaaattgcttcaaaagaaacttggccttgatatgggagctgca
attggaatgagtacagaagatttgttcaatgatgaggatttggactacacaccagcttca
tcgattctggtacacaaacaacctactctccaagctgcagaattgattgattcggaattt
cgagctggaatgagtagcagacaaaaaaataaggctaaaagaatggctaagttgtttgca
aaacaaagatcgaaagatgcagtagagaccaatgaaaaaagcaatgacagcactgatggt
gaaccagaagaaaaaagaagaaaaattggaaatgttatcatcagtcaacctgcaactgac
tccaaacttttagttgataatgttccagaagagagcaatgattggcctttggaaagtttt
tgtgaagaagtgtgtaatgatctctttgatccatcctgggagatccgtcatggtgcaggt
gttggactgagagaggtactcaaagctcatgggaaaagtggcggtaaaatgggagacagt
actgtagaagagatgattcaacaacaccaagattggctggaagacctagctatcagactt
ctttgtgtatttgctttagacagatttggtgattttgtttcagatgaagtagtggcacct
gtgcgagaaacttgcgctcaaactttgggagtagtgctgaaacatatgaatgagagtgga
gttcataaaactgtttctatcctgctaaaattacttacacaagagcaatgggaagtaagg
catggaggccttctagggataaagtatgctttagcagttcgtcaggatctaattgaaaca
ttactacctaaagtcttgcctgcaatcacagaaggactacaagatttggatgatgatgtt
agagccgttgccgcagcatctctggtgccagtcgtagagagtcttgtccacctccagccg
gagaaagtatcttttattcttaatatactgtgggatgcccttctagatttagatgacctg
acagcttccacaaacagcatcatgacccttctttcatcccttttaacttattctcaggtc
caaagatgcagtattcagcagtcacttacagttctggtaccgcgtgtgtggccatttctt
catcacacaatatcttctgtccgaaaagcagcattagaaactctgtttactctgttatct
acacaagatcagacttctgcaagctggctaactcccattttgcaagacatgttaaggcat
atctttcagttctgtattttggaaagtaaccaagaaattttagaattaatacataaggtg
tggcttgaattgttgagcaaagcttctttacagtatgtggtagctgctgcatgtccatgg
atgggagcttggctgtgcctgatgatgcagccttctcatttgcctattgatttaaatatg
ttgctggaggtgaaagccaaactgaaggaaaagtcaggtgggaagctgcgtccatgtcaa
ccccagaccaaagaagtggtccaagaatacatagctggtgccgaaagcgtcactgaagat
ccagcaactagagattttgttgtaatgagagctcggatgatggctgcaaaattacttgga
gccctctgctgctgcatttgtgatcccagtgtgaatgctgcttcccaagaaatcaagcca
gcagaatcacttgcccaactcttgcttttccacctgaattccaagtcagctttgcagagg
tttagtgttgctttagtaatctgtgagtgggctgccttgcagaaggaaaataaaatagtg
gccgatgctgtcctgtcacgcttacttggagttctttctgagcatctttattatgatgaa
attgcagttcccttcacccggatgcagaacgaatgtaaacaacttatctcttcattcacc
gatgcaaacattgatatttccagcaaagtaaactgcagcgtatttacaatagatcaagct
aatgaattggttactactgtttttaatgaagctacatcatttcaaaacctaaatcccaaa
gttttacagcaattagaaagcaagcgacagcaagttcaaatgacagtcacagaaacaaac
ctggaatggcaaacattgcagctgagagtgcatacatttactgcttgtgctgttgtcaat
ttggagcagcttccagaaaaaataaatccggttataaagcctttgatggaggctgtgaag
aaagaagaaaacacactagtacaaaattattcagctttatgcatagcaaaattgcttcag
caatgtattgcaagatctccctgccccaattcaaaaatcattaaaaatctttgcacctcg
ctgtgtgtggatccccatcttactcctttagcatcatgtccagcacagccacagagcagc
catgaaaactcaaaaggatctaattctgaaagagatgggatgcatcatacagtcaccaag
cacagaggtataattacactatataggcaccaaaaagctgcatttgccatcacaagccga
cggggtccaacaccaaaggccaccaaagcccaaattggagatttgcctgcaagcactagt
ggaaatgtaacagcagagcttgatgaagctcagaagccctacattgtacagcggagagga
gcagaatttgctttatccactatagcaaagcattttggagatgaaatggcagtaggcttg
ccacatctttgggatactatggtcgggtccttaaagaacagtatcgatataaataacttc
gatcgaaagttactcttggaaaaaggagatggaccagcccaggaattggtgaattctcta
caagtttttgaaataactgcagcttctatggatattcggcttcacactctgttaatacag
cacttgccttacctttgtatgtgccttcaacaccccagcactgcagtgaggcatatggcg
gcccgttgtgtgggtgtaatgagcaaaatagctaccgtggaaaccattcatatttttcta
gaaaaggttcttccttggctgggagcgatagatgatagtaccaagcaagaaggagcaatt
gaagctctcggcgctataatggagcaattagatgttggaattattccctatatagttctg
cttgtggttcctgttctgggcaggatgagtgatcagacagacagtgtccgtttcatggct
acccagtgctttgcaactctgattagattaatgccgcttgaggctggtattccagatcca
ccaaatatgtctgaagatttaattaaaataaaagccaaagaacgccatttcttggaacaa
ttattggatggaaaaaaactagaaaattataaaattccagtaccaattaaagcagaactc
agaaaatatcagcaggaaggtgtgaactggttggcttttctcaacaaatacaaacttcac
ggtatcctgtgtgatgatatgggcttaggaaaaaccctgcaatccatctgtattcttgca
ggagatcactatctcagggcccaagaatatgcaagaactaagatggctgatagcattcca
ctcccatccttggttgtgtgcccgcccaccctgacaggtcattgggtggatgaagtgggc
aaattttgttccaaggagtttttgaatcctttgcactatactggccctccaaccgaaagg
gcaaggttacagcaccatgtaaaaagacacaacctaattgtagcttcttatgatgttgtg
agaaatgacattgattttttcagaaatattaaattcaattactgtattcttgatgaagga
catgtcatcaaaaatggaaaaacgaagctatcaaaagctataaagcaattggctgccaat
tacagaataatactctctgggacaccaatccagaacaatgtcttagaattgtggtcacta
tttgattttcttatgccgggatttttgggtactgagcgtcagtttgcagctcgttatggc
aagcccatattagcaagtagagatgctcggagctctagtcgagaacaggaggcaggtgtc
cttgcaatggaggcattacacaggcaagtcctgccatttttattacgaaggatgaaagag
gacgtattgcaagatcttccaccaaaaatcattcaagactattactgtattctcagctcc
ctccaggttcaactgtatgaagattttgccaagtctcgcgccaaatgtgatgtcgatgaa
acagtttcagcagcttcactcactgaagagactgaaaaaccaaagcttaaagctacagga
cacgtatttcaggcattgcagtatttaaggaaattgtgcaaccatccagcactagtttta
actcctcatcacccagaacataaaaggatcacggagaagcttgcagcagagaattcttct
cttcgtgatatccagcatgcacctaaactctctgctttaaaacagctattactcgactgc
ggcttaggaaatggtggctctccagagagcggcaccgaaacgatagttgcccaacaccga
attctcatcttctgtcaactgaagagcatgctggacatagtagaacatgaccttctgaag
cctcacttgccctctgttacctacctgcgattagatggcagcataccggctggtcagaga
cactcaattgtctcacggtttaacaatgacccatccattgatgtgctgttgcttactact
catgttggtggactgggccttaacttgactggagctgataccgtggtatttgttgagcat
gattggaatccaatgaaagacctccaggcaatggatagagcgcatcgtattggacagaaa
cgtgttgttaatgtttatcgcttgataacaaggggaaccttggaggaaaaaataatgggt
cttcaaaaattcaaaatgaatattgcaaatacggtgatcagtcaagagaataccagtctt
cagagcatgggaacagatcagcttcttgacctcttcactctggataaggatggaaaaact
gaaaaatcagatggtgccacttctgtttctgggaaaacaaccataaagtcagtccttgaa
aatcttggagaactttgggatcaagaacagtatgattcagaatatagcctggaaaagttt
atgcactcactcaaataa
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integrated database retrieval system
