Pituophis catenifer annectens (San Diego gophersnake): 139318299
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Entry
139318299 CDS
T11059
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcae03016
]
139318299
Transfer RNA biogenesis [BR:
pcae03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
139318299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_19
TPR_14
TPR_12
TPR_17
CFAP70_TPR_C
TPR_CcmH_CycH
TPR_16
TPR_1
RMD1-3
TPR_11
TPR_MalT
TPR_10
TPR_15
ARM_TT21_5th
ETO1_C
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
139318299
NCBI-ProteinID:
XP_070801793
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MSLLSQEGLKEILQKLECHFTWELQKKDIAPDELEERIAEQIQFLTNKSKVRNYNLLAYV
KFLNDKKDEALENLQKAEEAVPIEYPEDVEKGSLVTWGNYAWVHYHMGNLTESQAYVEKV
ENTCKQLGSESPYKVELPQIDCDKGWALLKFGAWNYEKAKESFEKALEKEPKNPEFNSGY
AITVYRLEDHYEENPSGKKSSLEPLSLAAKLNPDDVFVLPLLALKLQETNRVEEGEKYIK
EVLGKHPDVPYVLRYAAKFYRKKGDIETSLQHLKKALSLTPNAGFLYHQIGLCYRAQYYV
MKNESRCDKDKMEELIRLCVSYFEKVVERKPKFFFANIDLAKMYAEQGRLQKADEIYQKL
FTMSNLTPLEKQQAHFNYGCFQNFYRRSQSKAIKQYFAVLKINFESSEREKCKGILKKLM
DKKIRYGEAEAENFAILGFIHQLNGKKQQALKAYEEALDIDPGNEEYLSALMNLKLSL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctctcccaagaaggtttaaaggagattctccaaaaacttgaatgccatttt
acatgggagttgcagaaaaaggatattgctcctgatgaattggaggaaagaattgctgag
cagatccagttcttaaccaacaaatccaaagttcgaaattacaaccttcttgcctatgtg
aaattcctgaacgacaagaaggacgaagccctggaaaacctgcagaaagctgaagaggct
gtgcccatagaataccctgaggatgttgaaaagggaagcctggtcacctggggcaactat
gcctgggtgcactaccacatgggcaatcttactgaatcccaagcctacgtggagaaggta
gaaaacacctgcaagcaacttggaagtgagtctccttataaggtggagctcccacagatt
gactgtgataagggttgggcgctcctcaaatttggagcctggaattatgaaaaggccaag
gagagctttgaaaaagccctggaaaaagaacccaaaaatccagaatttaactcgggctat
gcaatcacggtataccgcttggaagatcattatgaagaaaacccttcagggaaaaagtca
tccctggaacctttgagccttgcagcaaaactgaatcctgatgatgtttttgttcttcct
ctccttgcattaaagttacaggaaacaaacagagtggaggaaggagaaaaatacattaag
gaagtgcttggaaaacatcctgacgttccatatgtattaaggtacgctgccaaattttac
aggaagaaaggagacatagagacatcattgcaacatttgaagaaagcattaagcttgacc
ccaaatgctggattcttgtaccatcagattggcctttgctatagggcacagtattatgtg
atgaaaaatgaaagccgatgtgacaaggataaaatggaggaattgatcagactttgcgtt
tcttatttcgaaaaagtggtggagcgtaaacccaagtttttctttgctaatattgacctt
gcgaagatgtatgcagaacaaggaaggctacagaaagcggatgaaatataccagaagctc
tttaccatgagcaacctaactcccttggagaagcaacaagcccattttaattatgggtgt
tttcaaaatttttacagaaggtcacaatcaaaagccatcaaacaatactttgcagttctg
aagattaactttgagtcttcagagagagagaaatgcaagggtatattaaagaaattgatg
gacaagaaaatcaggtatggtgaagccgaggctgagaatttcgccatccttggatttatt
catcagctcaatggaaaaaagcaacaagcgttgaaagcctatgaagaagccttggacatt
gatcctgggaatgaagagtatctgagtgcacttatgaacttgaagctttctttgtaa
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