Pituophis catenifer annectens (San Diego gophersnake): 139318522
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Entry
139318522 CDS
T11059
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139318522 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139318522 (TRIP12)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139318522 (TRIP12)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
HECT type E3
139318522 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
139318522
NCBI-ProteinID:
XP_070802089
LinkDB
All DBs
Position
Unknown
AA seq
2069 aa
AA seq
DB search
MSNRPNNSPGGSLRRSQRNTVGAQSQDDAVGGRSHLGQAKHKARSPSESRKSISKAPKVQ
SNTTTEQSKGHFSKRGCSSSAIIIPQQEALDTDSTLEHQKSGQVPKRDSSRGVKRSASPD
YNQTNSPSPAKKTKALQHADSSSDLERNKSQTKSKKRHLHQEQESKSSQLPSTSKAHTRK
GGATVSSRSQKRKRTETLPIVKSRSAAESTGSEERPAKPTKLASKSVSSAKAGCSTITDS
SSSASTSSSSSVVASASSAVSQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEQNKIGG
SSKFDWAARFSPKVSLPKTKLSLPGSSKPEASKPGPSGLQAKLASLRKATKKRSESPPAE
LPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARADEA
PQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRT
IGSGASSKAQQLLQGLQATDESQQLQSVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQ
MEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLS
RRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQR
LTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIM
VVRMFSLMCSNCPMLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSL
ICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVG
EDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTSTSGHPESKKDDARAQL
MKEDPDLAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAV
SSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSP
PRACTNGSGTLSATTTVSTGTATTASNAASDLGSPSLQHSREDSLDLSPQGRLSDVLKRK
RLPKRGPRRPKYSPPRDEDKVDNQAKSPTATQSPKSSFLASLNPKTWGRLSTQSNSNNIE
PARTAGVSGLARAASKDTISNNREKIKSWIKEQAHKFVERYFSSENMDGSNPALNVLQRL
CTATEQLNLQADGGVECLVEIRSIVSESDVSSFEIQHSGFMKQLLLYLTSKGEKDAVSRD
VRLKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGN
GTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLV
VRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAV
RQFSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDSNKDSVGGKRGRAQTAP
TKTSPRNAKKHDELWHDGVCPSVSNPLEVYLISSAPESITFEDPSLDVVILLRVLHAMSR
YWYYLYDNASCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKSCPFFFP
FDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAE
SVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGS
QEGTKYVHNIQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFY
KWMLRQETSLTSHDLFNIDPVVAKSVYHLEEIVRQKRRLEQDKSQTKESLQYALETLTMN
GCSVEDLGLDFTLPGFPNIELKKGGKDIPVTVHNLEEYLRLVIFWALNEGVSRQFDSFRD
GFESVFPLSHLQYFYPEELDQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKFLFEIL
SSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYL
KLPDYSSIEIMREKLLIAAKEGQQSFHLS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacagtccaggggggtcactgcgacgttcacaaaggaacact
gtcggggcccaatcgcaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaagcacgtagcccttctgaaagtagaaaatctatatcaaaggcacccaaagtgcag
tccaatactactactgaacagtccaaaggacacttttctaaaagaggctgtagctcatct
gctattataattccacaacaagaggctctggacacagacagtactttagagcatcaaaaa
tccgggcaggtgcctaaaagagacagttctcgaggagtgaaacgcagtgctagcccagat
tacaaccagacaaattctcctagccctgccaaaaaaaccaaagcacttcagcacgctgat
tcttcttcggacttggaaagaaataaatctcagactaagtctaagaaaagacatttgcat
caagagcaagagtcaaagtcttcacaattgccatcaaccagtaaagctcacaccagaaag
ggtggagctaccgttagctccagaagccagaaacggaaaaggacagaaaccttacctatt
gtaaagagtcgttcagcagctgaatcaactggcagtgaagagagaccagcaaaacccacc
aagctggcttcaaaatcagtgagctcagccaaagctgggtgcagtaccatcacagattcc
tcctcttcagcctctacatcttcctcctcctctgttgttgcttctgcatcttctgctgtt
tctcagggtgctagagtcaaacagggaaaagaccagagcaaggccaggcgctccagatct
gcatccagccctagcccacggaggagtagcagggataaagaacaaaataaaataggtggc
tcttcaaagtttgattgggctgctcgttttagccccaaggttagcttgcctaaaacaaaa
ctttctctaccggggtcttctaaaccagaggcatcaaaacctgggccttcaggattacag
gctaaactagcaagcttgagaaaagctacaaaaaagcgcagtgaatcaccacctgctgag
ctccccagtttgaggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagt
cggcgaggctctggcctgggcaaaagaggagcagctgaggctcgccgacaggagaaaatg
gctgatcctgataacaatcaggatggtgttaattcttcagctgcacgagctgatgaggct
ccacaaggagctgcagcttctagttctgttgctggggctgtgggcatgaccacctctggt
gaaagtgaatcagatgattctgagatgggaagattacaagctttgttagaagctagagga
ctccctccacatctgtttggtcctcttggccctcgaatgtctcagctattccacagaaca
attggaagtggagctagttctaaagctcagcaacttctacaagggcttcaggccactgat
gaaagccagcagttacagtcagtgatagaaatgtgtcagctattggtcatgggtaatgaa
gaaactttaggaggttttccagtcaagagtgttgttccagctctaataactttgctacag
atggagcacaacttcgacattatgaatcatgcttgtcgagccttaacttacatgatggaa
gcacttcccagatcatctgcagttgtggtggatgcaattcctgtttttttggagaagctt
caagttattcagtgtattgatgtggcagagcaagcattgactgccttggagatgttgtca
cgcagacacagtaaagctattttgcaggcaggaggcttagcagactgtttgctgtacctg
gagtttttcagcataaatgctcagaggaatgcattagctattgctgccaattgctgccag
agcatcactcctgatgagtttcactttgttgcagattctcttccactgcttacccaaagg
ctaacccaccaggataaaaagtcagtagaaagcacttgcctttgttttgcacgtttggtg
gacaacttccaacatgaagagaatttgctgcagcaggttgcttctaaggatttgcttaca
aatattcaacaactcctagtagtgactcctccaattttgagctcagggatgttcatcatg
gtggtgcgcatgttttctctaatgtgttccaactgtcctatgctagcagttcagcttatg
aagcaaaacattgcagaaactcttcactttcttctttgtggagcctcaaatgggagttgt
caggaacaaattgatcttgttccaagaagtcctcaagaactgtatgaacttacttcactt
atctgtgaattgatgccatgcttacctaaagaaggaatttttgctgttgacactatgcta
aagaaaggaaatgcgcaaaacacagatggtgcaatatggcagtggcgagatgacaggggt
ctctggcatccctataacagaattgatagccggataattgaggcagctcatcaggttggt
gaagatgaaataagtctgtctacattggggcgtgtttatacaattgactttaattctatg
cagcagatcaatgaggatactggaacagcacgtgccattcagagaaaacccaatcctcta
gccaataccagtactagtggacatccagaatcaaagaaggatgatgctcgagcacagcta
atgaaagaagatccagatctagctaaatcttttattaaaaccttatttggtgttctctat
gaagtgtatagttcttcagccggacctgctgttagacacaagtgccttagagcaattctt
agaataatttattttgctgatgctgaacttctgaaggatgtactgaaaaatcatgctgtg
tcaagtcatattgcctctatgctgtcaagtcaagatcttaagatagttgttggagccctt
cagatggcagaaattttaatgcaaaaattacctgacatttttagtgtttacttcaggaga
gaaggagttatgcaccaggtgaagaatttagcagaatcggaggctttactgacaagtccc
cccagggcttgcactaatggctcaggaactcttagtgctactacaacagtaagcactgga
acagccactactgctagcaatgctgcttcagacttaggttctccaagcttacagcatagc
agggaagactctttggacctgagtccacagggccgattaagtgatgttttgaagagaaaa
agattgccaaaacgtggaccccgaaggccaaaatattcacctcccagagatgaggacaaa
gtagacaatcaagcaaaaagccctactgctacgcaatctccaaaatcttccttcttggca
agtttgaatcctaaaacgtggggaagattaagcacacagtcgaacagcaacaacattgaa
ccagcacgtacagctggtgtgagtggcctggcaagagctgcttcaaaagatacaatatcc
aacaacagagagaaaattaagagttggattaaagagcaggctcacaaatttgtggaacgt
tattttagttcggagaatatggatggaagtaaccctgcactaaatgtgttacagagactt
tgcactgcaactgaacaactcaaccttcaggcggatggtggagttgagtgccttgtagaa
atccgtagtatagtctctgagtctgatgtctcttcatttgagatccagcacagtgggttt
atgaagcagttgctgctttacttgacgtcaaagggtgaaaaagatgccgtaagcagagat
gtcagattgaaaaggttccttcatgtgtttttttcttctcctcttcctggagaagaaccc
cttggaagattagaacctttagaaaatgcacctttgttagcattggtccataaaatgaat
aattgtcttagtcagatggagcaatttccagttaaagtccatgactttccaagtggaaat
ggaacgggaagcagtttttctcttaacagaggatcacaagctttaaaatttttcaacaca
catcagttgaaatgccagctgcaaagacatccagattgtgctaatgtaaaacagtggaaa
ggaggacctgtgaagatagatcctctagcgttggtacaagccattgaaagatatcttgtc
gttagaggttatggaagagtgagagaagatgatgaagatagtgatgatgatggatcagat
gaggaaatagatgaatctctggctgctcagttcctaaattcagggaatgtgaggcaccgg
cttcaattctatattggggatcatctcctgccatacaacatgacagtttatcaagcagtt
agacaatttagtttgcaagctgaagaagagagggagtctacagatgatgaaagcaaccca
ttgggaagagctggcatttggaccaaaactcataccatttggtacaagccagtacgagaa
gatgaagatagtaataaagatagtgttggtggtaaaagaggaagagcacaaactgctcct
acgaaaacatctcccagaaatgcaaaaaaacatgatgaattgtggcatgatggtgtatgt
ccttctgtctcaaatcctttggaagtttatctcatatcttctgctcctgaaagtataact
tttgaagatccttcattagatgttgttattcttttaagagttttacatgccatgagtcgc
tattggtattatctatatgataatgcaagctgtaaagaaattatcccaacatccgaattt
atcaacagtaagctaacagcaaaagctaacagacagcttcaagatcctttggtaataatg
acaggaaacataccaacatggctgacagagcttggaaaatcatgtccttttttctttcca
tttgacactcggcaaatgctgttttatgtaactgcatttgatcgtgatcgagccatgcag
agactgctggacactaatccagaaatcaatcagtctgattctcaggatagcagagtagca
ccccggctggatcggaaaaagcggacagtgaatagagaggaactattaaaacaagcagaa
tcagtgatgcaagatctgggcagttcaagagctatgttggaaatccagtatgaaaatgaa
gttggcacaggtttaggccccacactggagttttatgcacttgtatctcaggaattacaa
cgagcagacttgggcctatggagaggtgaagaagttactcttgccaatcctaaaggaagc
caagaagggaccaaatatgttcataatattcaaggtctgtttgcacttccatttggcaga
actgctaagcctgcccatattgctaaagttaaaatgaagttccgttttctggggaaatta
atggcaaaagcaatcatggattttagactggttgaccttccacttggccttcccttttac
aaatggatgctgcgacaggaaacatctctaacatctcatgacttgttcaatattgatcct
gtagtagccaaatctgtgtatcatcttgaagaaattgtgagacagaagaggagacttgaa
caagacaaatcacagaccaaagaaagtctacaatatgcactggagacccttacaatgaat
ggctgttcagttgaagatctaggattggatttcacattgccagggtttccaaatatagaa
ctgaaaaaaggagggaaagacatacctgtaactgttcataatttagaagaatatctcaga
ctagttatattctgggcactaaatgaaggtgtttctagacaatttgactcattcagagat
ggatttgaatctgtctttccccttagtcatcttcagtacttctatcccgaggagctggat
caattgctgtgtggtagcaaaacagacacttgggatgcaaagacactaatggaatgttgt
aggccagatcatggatatacacatgacagtcgtgctgtgaaattcctatttgaaattctt
agtagttttgatagtgaacagcagagattatttcttcagtttgtgactggtagcccgaga
ctgccagtcggaggctttcgaagtttgaatcctccccttacgattgtacggaagacattt
gaatccacagaaaatccagatgacttcttaccctcagtaatgacctgtgtaaactatctc
aagttgccagactattcaagtattgagataatgcgtgaaaaacttttgatagctgcaaaa
gaagggcagcagtcattccacctttcctga
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integrated database retrieval system
