Pituophis catenifer annectens (San Diego gophersnake): 139318550
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Entry
139318550 CDS
T11059
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139318550 (JMJD1C)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
139318550 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
DUF2753
FYVE
C1_2
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
139318550
NCBI-ProteinID:
XP_070802134
LinkDB
All DBs
Position
Unknown
AA seq
2337 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSSQNSNTAHGHYTRAQANSPRPAMNSQNAAPKQNSQQ
LQRNARPNKRKGSDSSMPEEEKTKEEKYDCISHGENSKSKNKPFMFKRRKPEEDEEKMSA
KRQRTDNTSDSSESSDSENSNKRLTDTSSEQNSDTELKSKNVVKINGKEGKSQSDMVEDK
NLTGNQSPWHEVQEDKTQQMERPESADLEFQEISLHRPELPTVYDRSDNDGCIQECRIEN
KHHRERLVDEQFVTNCPTPKSYIDINTETSSVNQTQENLSSSFSLQTGQETASLISDSKQ
PSTNTNILEVKKSETIENWINNANKMDLMQSNIGKNISANEHLNSENIHCGSAPSLTVIS
LAEEGRVHKQTAVSDAMKSKTNPLVENTKIKTNTSPEIKYKPPQSPDTVKSKVNYLNSHV
IGVTKTAVKTEPDLPRSIFHPIPPRVTSLEVTKNPLSVDKKEHFTIYRDPILLGQETGTN
HMTPYLHQHNYPPHSTSHRTSLNPSTHHSALTGTPHLLAESSNQTPLSAINTHPLSSASH
HSVHHQHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQLLQHQSPHLLGQTH
PSTSYNHLGLYPIIWQYPNGAHAYTGLGIPPSKWVHSETSVNTETSLRRNTPNPWLHQPT
PATSSDGLGLLSHIPVRPSSAEPHRPLKLTSHSSPPLSKGIVDRHKDELERKGIFESLHS
AKSDLEQNRSQAAKEGHLQRQFVDPLQRSFQEAGERLSKYKEEHRRILQESIEVAPFTTK
MKAHENEKESYSRMMPLSSSSPKSHGGKPDKDSELYKMKHSVPQSLPQSNYFTTLSNSVV
NEPPRTYLPKEIAGTCADKQNTCPSTAAAATQSLASFTSSLSKPPPLIKHQPETESSVGK
GTDQLSQQMTSHSVNSFRSNNGSPTQLTISSSGSLRTMPALHRAPVFHPPVHPNLERKEG
SYSSLSPPTLTPVQPVNTGNKAHELQKPPTLVPEPKETENSYKSVTDQKLSALWKNSSSP
NNEKIEWHLERTHGKSTSATASVIVRPPSSSKYDTVSVVQSAPKVQVTERLKGINQPVCL
KSVEAKESGRTVVSKMNSDVIHACYEKNFPAASQGSVPSSVVQTTTVLCSTVTDVVTSVT
TSDVPGTGSSQVTDCLPKAGLPCTPVDSTASRPINKDVAHKEECSASSTAPVTVACCKTE
SSLQVSTGFSGPSDFVHLKKHKAALAAAQFKINSTNDAESHTVKNLIYPASVSVDSAVNS
STINKGNTLSGGQISQTSQANYHTKLKKAWLTRHSEEDKITNKKESSENCVSEMIKPCTV
NLIASTSNDLQNNIDNKLAGEKLVKEEKHARRKTKRMYESGSESGDSDESESKSEQRTKR
QPKPTYKKKQNDLQKKKGDLEEDVKPNGLLSRGAKEKNKLKLQSGNNNTGIPRSVLKDWR
KVKKLKQTGESFLQDDSCYEIGPNLQKCRECRLIRSKKSEESAHSPVFCRFYYFRRLSFS
KNGVVRIDGFSSPDQYDDEAMNLWTHESYEDDEMDLETCKYILEHIGDKFCQLVTSEKTA
MSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDK
ELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTELVEALHTLREKHEIKPHCQCGSKQNVQI
GRFPPVNGVSQILQNVLNHSNKISLCIPELQQQKPSQKAEANGNASPGSDISSESKLNPP
ESQSPLHWLADLAEQKAREEKKENKDYPLGKHTKEEQEQDNSESLNFKVSTPLSQNNEQG
STLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASSKSGRTMPNILDDIIASVVENKIPP
NRTSKINVKSEMKEEPKNNRKSISDDNNRLFNHIPHSWICNKHVLWLSDHENNNNWKLFK
ECWKQGKFVLVSGIHKKMNASLWKADFISSDFGDLKADLLNCKDSITASGNVKEFWDGFE
EISKRQKSKNGETIVLKLKDLPSGDDFKTMMPARYEDLLKSLPLPEYCNPEGKLNLASYL
PEFFVRPDLGPRLCSAYGVAAAKDHDVGTTNLHIEVSDIVNILVSVGIAKGNGVPSKSGV
LKKFEEEDLDDLLRKRLKDSSELPGALWHIYANKDADKIKEFLQKVAKEQGLDVLPEHDP
IRDQSWYVNKKLRQRLFKEYGVKTCTLIQFLGDAVVLPAGALHQVQNFHSCIQVTEDFVS
PEHLTQSFHLTQELRLSKEEINYDDKMQIKNILCHAVKEMVRALKSHEHEIEDIEEN
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccttattctttaaacggctatagggtgagagtatatagacaggactctgcc
acccagtggttcactggtataattactcatcatgatctgttcactcgcactatgattgtt
atgaatgatcaggtattagagccacaaaatgttgatccatctatggttcagatgaccttt
ctagatgacgtcgttcattctttgttgaaaggtgaaaacataggcattacgtcacgacgc
aggtctcgttccagtcagaacagcaacacagctcacggccactatacccgagctcaagca
aatagcccgaggccagcaatgaattcccaaaatgcagcaccaaaacagaattcacagcaa
ttacaacgaaatgctcgtccaaataaaaggaaaggttccgatagtagcatgccagaggaa
gagaagactaaagaagaaaaatatgactgtataagccatggagaaaattcgaaaagtaaa
aataaaccatttatgtttaaaagaagaaaaccagaagaagatgaggaaaaaatgagtgca
aagagacagcgtacagacaatacttcagacagttcagagagtagtgactctgaaaattca
aacaaaagattgacagatacttcctcagagcaaaattcagatactgaattgaaaagcaaa
aatgttgtaaagataaatgggaaagaaggaaaatcccagagtgacatggtagaagacaag
aacctaacaggcaaccagtctccctggcatgaagtacaagaagataaaacacaacaaatg
gaaagaccagaatcagctgatttggaatttcaggaaatttcactccatcgacctgaactg
ccaacagtctatgatcgtagtgataatgacggctgcattcaagagtgcagaatagaaaat
aagcatcacagagagcgtctagtcgatgaacaatttgtaaccaattgtcccacaccaaaa
agttatattgacataaatactgaaaccagttcagttaaccagactcaggaaaacttatca
agtagttttagtttacaaactggtcaggaaacagcatctcttatcagtgattctaaacaa
ccatctacaaataccaacattctggaagttaaaaaatcagaaactattgagaactggatt
aataatgccaataaaatggatctgatgcaatcaaacattgggaaaaatatatctgcaaat
gaacatttaaattctgaaaacattcactgtggttctgccccatcgttaactgtaatatct
ctagcagaagaaggcagagttcataaacaaacggcagtctctgatgctatgaagtcaaaa
actaatccactagttgaaaacactaaaatcaagacaaacacctcaccagaaattaaatat
aagcctccccagtcgccggacactgtgaaatccaaggttaattaccttaacagccatgtt
attggagtaacaaagacagcagttaaaacggagcctgatttgcccaggtctatcttccat
ccaattccacctagagttacttcattagaagtgactaaaaacccactttctgttgacaaa
aaagaacatttcacaatttacagagatcccattcttcttggtcaagaaacaggaactaat
cacatgacaccatatttacatcagcataattacccacctcattccacttcccatagaact
tctttaaatccaagcactcatcactctgcattaacaggcacaccccatttattagccgaa
tcctcaaatcaaactccattgtctgctattaacactcaccctcttagcagtgcatctcat
cactctgttcaccatcagcatctgctccctgcagttttaccaggcgtgcctacagcctct
ttgttgggaggccatccacgactagaaacagctcacgcaagcagtttaagtcatttagca
ttagcacatcagcaacagctgctacagcatcagtcaccacatcttctggggcaaactcac
ccatctacttcatataatcatttaggactttatccaattatttggcagtatccaaatgga
gcacatgcttatacaggacttgggataccaccgtctaaatgggtccattcagaaacttct
gttaataccgagacttctttgagaagaaatactcctaatccttggttacaccagcccacc
cctgcgacctcatctgatggtcttggattgctgagtcatattcctgtaagaccgtctagt
gcagagccacatcggccactcaaattgacatcccactctagtcctcccttgtcaaaaggc
attgtggatcgccataaagatgaattggagaggaagggaatttttgaatctctgcattca
gcaaaatcagatctagaacagaacagatcacaggctgcaaaagaaggccacttacaaaga
caatttgtggatcctctgcaaagatcatttcaagaggcaggggagagactaagcaagtat
aaagaagaacacagacgaatactgcaggaaagcattgaggttgcccctttcacaactaaa
atgaaggcccatgaaaatgaaaaggagtcttattccagaatgatgcctttatcatcctct
agtcccaaaagccatggaggaaaacctgacaaagattcagaactctataaaatgaagcat
tcagtaccacagagcttgccacagagtaattacttcaccaccttgtctaatagtgttgtg
aacgaacctccacgaacatacttgccaaaggaaattgcaggcacgtgtgctgataaacag
aatacttgtccgtcaacagcagctgctgctactcagtcactcgcttctttcacgtcatcc
ctttcaaaacctccgcctttgattaagcaccagccagaaactgaaagctcagtgggcaag
ggaacagatcagctttcacagcaaatgacgtcccattcagtaaattcttttagaagtaac
aacggaagccctactcagttaacaatttcatcttctggctcactccgaacaatgcctgct
ttacacagagcacctgtgtttcatccacctgtccatcccaacttggagagaaaagaaggc
agttacagtagcctttctcctccaaccttaaccccggtgcagccagttaatacaggtaac
aaagcccatgagttacagaagccaccaactttagtacctgagccaaaggaaacagagaat
agttacaagagtgttaccgatcagaaactttcagctctatggaaaaatagtagtagtcca
aataatgaaaaaatagaatggcacttggaaagaactcacgggaaatcaacttctgccaca
gcgtctgtcattgtacgcccaccatcaagttcaaagtatgatacggtatcggtcgtgcag
tcagctcccaaagtgcaagttactgaaagattaaaaggaataaatcaaccagtttgcctt
aagtcagtggaagccaaagagagtgggagaacagttgtgtcaaaaatgaattcagatgtg
attcatgcctgctatgaaaagaattttccagctgcttcccagggcagtgttcccagttca
gtcgtacaaaccacaactgtgttatgcagtaccgtaacggatgtcgtcacgtctgtgact
acttctgatgtaccaggtacaggcagttcacaagtgacagattgtctgccaaaagcaggg
ttaccctgtacgcccgtagacagtactgcttctaggcccataaataaggatgtggcacac
aaagaggaatgtagtgccagctcaacagctcctgttacagtggcttgctgcaaaacagaa
agtagccttcaggtgagcactggattctctggcccatcagactttgttcacttgaaaaag
cacaaagcagcattggctgcagctcagtttaaaattaatagtaccaatgatgctgaatct
catactgtgaaaaacctaatatatccagcctcggtttctgtagatagtgctgtcaactca
agtacaatcaacaaaggaaatactctgagtggtgggcaaatttcccagacgagtcaagca
aactatcacaccaaattaaaaaaagcttggctcacgaggcattcggaagaagacaaaatc
accaataaaaaggagagttccgaaaattgtgtctcagaaatgataaagccgtgtactgtt
aacttaattgcttctacatcaaatgatttgcagaacaacatagacaacaaattggcaggg
gaaaagcttgtgaaagaagagaaacacgcaaggagaaaaaccaaaagaatgtatgaatct
ggctctgaaagtggagattctgatgagagtgagagcaagtcagagcagaggacaaaacgg
cagccgaagcccacatacaaaaagaaacagaatgatttgcaaaagaaaaaaggagacctg
gaggaagatgtaaaacccaatgggcttctcagcaggggtgccaaagaaaaaaacaaattg
aagttacagagtggcaacaataacactggcatacctcgttcagtattaaaggactggcgt
aaagtaaagaagctgaaacaaactggagaatcttttttgcaagatgattcttgttatgaa
ataggacccaatttgcaaaaatgcagagaatgtagactgattagaagcaagaaaagtgaa
gaatcagctcattcaccagtattctgtagattctattactttcgccggctttccttcagc
aaaaatggagtggttcggattgatggcttttcttctcccgatcagtatgatgatgaagct
atgaatttatggacacatgaaagttatgaagatgatgaaatggacttagaaacttgcaaa
tacatcttagaacatataggtgacaaattttgtcagttagtgacatctgagaaaacagct
atgtcctgggtcaaaaaggatgccaaaattgcttggaagagagcagtcagaggagtccgc
gaaatgtgtgatgcctgtgaggccaccctgtttaatatccactgggtctgccaaaaatgt
ggatttgtggtctgtctagattgctataaggctaaggaaaggaagagttctagagataaa
gaactgtatgcatggatgaaatgtgtgaaaggacaacctcatgatcataaacatttaatg
ccaactcaaattattcctggatcagttttaacggaacttgttgaagcattacatactctt
agagagaaacatgaaattaaaccccattgccagtgtggcagcaaacagaatgtacaaatt
ggcaggtttcccccagtgaacggagtatctcagattttacagaatgtccttaatcacagt
aataaaatttctctgtgcatacctgagttacaacagcaaaagccatctcagaaagctgaa
gcaaatggcaacgcaagcccaggaagtgacataagttcggagagcaagttaaatcctcct
gagtcacaatccccactgcattggttggcagatctagcagagcaaaaggctagagaagaa
aaaaaagaaaacaaagattatccccttggaaagcatacaaaggaggaacaagagcaagac
aactcagaatctcttaatttcaaggtgtcaactcctttgtctcaaaataatgagcagggc
tcaacattacgagacctgctgactactacagctggcaaattgcgcctaggctccacagat
gctggcattgcttttgctccggtttattcaacaggaacagcaagtagcaaaagtggaagg
actatgccaaacattcttgatgacataattgcttcagttgtagaaaacaagataccacca
aatagaacatcaaagataaatgtaaaatctgaaatgaaggaagagccaaagaacaacaga
aaaagcatttcagatgataacaaccgattattcaatcatattccacattcatggatttgt
aataagcatgttttgtggctcagcgatcatgaaaacaacaacaactggaaactcttcaaa
gagtgttggaaacaaggaaagtttgtattagtctctggaatccacaaaaaaatgaatgcc
agcttgtggaaagcagattttattagttcagattttggtgatctcaaagctgatcttctg
aattgcaaagatagcattactgcaagtggcaatgtcaaggaattctgggatggttttgaa
gaaatttcaaagcggcaaaaaagtaaaaatggagaaaccattgtactgaagctgaaagac
ttgccttcaggggacgatttcaagaccatgatgcctgcaaggtatgaagatttattaaaa
agtttaccgctacctgaatattgtaacccagagggaaaacttaatttggcttcgtacttg
ccagaattttttgtgcgcccagatttgggacctagattatgcagcgcatatggtgtggct
gctgcaaaagaccatgatgtcggaactacaaatcttcatattgaagtatctgacattgtg
aacatccttgtcagtgttggtatagcaaaggggaatggagtcccttcaaaatcaggggta
ttaaaaaagtttgaagaagaagatttggatgatctgctaagaaaaagactgaaggattca
agtgaattgccaggtgccttgtggcatatttatgccaacaaggatgccgacaaaataaag
gagtttctacaaaaagttgcaaaggaacaaggtttagatgtattaccagagcatgatcca
atacgtgatcagagttggtatgtaaacaaaaagctccgccaaagactgtttaaagaatat
ggagtaaaaacctgtactctcatccagtttcttggtgatgctgtggttttaccagcagga
gctctgcaccaggtgcaaaattttcatagctgtattcaagtaacagaagactttgtatcc
ccagaacatcttacacaatcttttcatttaacacaagaacttaggctctcaaaagaagaa
atcaactatgatgataagatgcagataaaaaatatattatgtcacgcagttaaggaaatg
gtaagagctttgaaatctcatgaacatgaaattgaagatattgaagaaaattaa
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integrated database retrieval system
