Pituophis catenifer annectens (San Diego gophersnake): 139318771
Help
Entry
139318771 CDS
T11059
Symbol
DDX21
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcae03009
]
139318771 (DDX21)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139318771 (DDX21)
Enzymes [BR:
pcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139318771 (DDX21)
Ribosome biogenesis [BR:
pcae03009
]
Eukaryotic type
Pre-60S particles
Helicases
139318771 (DDX21)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139318771 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
139318771
NCBI-ProteinID:
XP_070802466
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MWATRLLRGVTPHLQPWRGPXREPSRLPPRPAVSXLHGRSSSRAAPLPSAGPXGAELFPF
TPASVSSSRFCRRLRGQESQEMPAAPRFESQSEDDLEPETPMEPDAAPHNGGPKKNKKDK
KDKAEKQKRKKHTLAETELLDLELEPPKAKKIKKKKEMANKNEDAISECNSIFHMSNGVK
HSKKDNNSGEDSHTECESDQDQELTAEQKEGAFANFDISKATLDLLKARGVTYLFPVQVK
TFKPVFEGKDVIAQARTGTGKTFSFAIPLIEKLYRDPQERKRGRSPKVLVLTPTRELAMQ
VARDFKDITKKLTVACFYGGTAYNGQLDLIRNGIDILVGTPGRIKDHLQNNKLDVSKLKH
VVLDEVDQMLDMGFAEQVEEILVNSYQKDSEDNPQTLLFSATCPQWVYNVAKKYMKSKYE
QVDLIGKKTKKTAMTVEHLAIECHWSQRAAVIGDVIQVYSGSHGRTIIFCETKREATELA
LNASIKQDAQSLHGDIPQKQREVTLKGFRSGTFGVLVATNVAARGLDIPEVDLVIQNSPP
KDVESYIHRSGRTGRAGRTGVCICFYQRREDYQLKQVEQKAGITFKRVGVPTATDIIKAS
SKDATRALDSVPPSAIDYFRQSAEQLIEEKGAVEALAAALAHISGATSIEQRSLLNSDVG
YVTMILQCSVEMHATGYAWRGLKEQLGEDVDNKIARMCFLKGKMGVCFDIPKAELNKIKE
TWQDTRRWQLSVATELPELENLPREGGRNPGSEFRNGRRNGGFNRPDRFRNRGQKRNYNQ
AF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgacccggctgctccgcggggtgacgccgcacctgcagccctggcgaggccct
tagcgagagccgagtcgccttcctccccggcccgccgtctccncgctgcacggccgctcc
tcctcccgcgccgcccctcttccctccgcagggccgngcggggcggagctctttcctttc
acgccggcctcggtttcgagtagccgcttctgccgtcgcctccgcggccaagagtcccag
gaaatgcccgcggccccccgcttcgagtcccagagcgaggacgacctggagcccgagacc
cccatggagcccgacgccgctccgcacaacggcggccccaaaaagaacaagaaggataaa
aaagataaagcagaaaagcagaaacggaaaaagcatacgttagccgagactgaattactg
gatttggagttggagccaccaaaagcaaagaaaattaaaaaaaagaaagaaatggctaat
aaaaatgaagatgcaatttcagaatgcaattcaatatttcacatgagtaatggggtaaag
cactcaaaaaaggataataattctggcgaagattcacatacagaatgtgaaagcgatcaa
gatcaggagctaacagcagaacaaaaggaaggtgcttttgctaattttgatatctctaaa
gcaaccctggatcttctgaaagctcgtggtgtcacctacctgtttccagtacaagtgaag
actttcaagccagtatttgaaggcaaagacgtaattgcccaagctcggacaggaacagga
aaaacattctccttcgccattccattaattgaaaaactttatagagatccacaggaaaga
aaaagaggccgttcgccaaaggtactagttctgactccaaccagagaattggcaatgcag
gttgccagagacttcaaagatattacaaagaaacttaccgtggcttgtttttatggagga
acggcgtataatggacagttggatctaattagaaatggcattgacatcctggttgggact
cctggtcgaataaaagatcacctccaaaataataaattggatgtttctaaattgaaacat
gttgtcttggatgaagttgatcagatgttggatatgggatttgctgaacaagtagaagaa
atcttagtgaattcttatcagaaagattctgaagataacccccagactctcttgttttct
gcaacttgccctcagtgggtttacaatgtagcaaagaaatatatgaaatccaaatatgag
caagttgatcttattggaaagaagactaaaaaaactgctatgactgtagagcatttagcc
atcgaatgccattggtcccaaagagctgcagtgattggagatgtcattcaagtctacagc
gggagtcatggacgaaccatcatattttgtgagacaaaaagagaagcaactgaactagct
cttaatgcctcaataaaacaggatgcacaatctttacatggtgacattccccaaaagcag
agagaggtcactttgaaaggctttcgtagtggaacctttggagtactggttgcaactaat
gtggctgcccgtggcttagatattccagaagttgatctggtaatacagaattccccacca
aaggatgtagagtcttacattcatcggtctggacgcacaggccgagctggacggactggg
gtctgtatctgtttctatcagcgcagggaagattatcagctgaaacaagtagaacaaaaa
gcgggcattacatttaagcgtgtaggtgttcctacagcaacagacataattaaagcttcc
agtaaagatgcaaccagagctttggattctgttcctccatctgccattgactacttcaga
caatctgctgaacagctaatagaagaaaagggggccgtggaagctctggctgcagccctg
gctcatatctcgggagctacatctattgaacagcgctctttgctcaactctgatgtgggt
tatgtgaccatgatacttcagtgctcggtagaaatgcatgccactggttatgcttggcgg
ggtctgaaagaacaattgggtgaggacgtggacaacaaaatagccagaatgtgttttctc
aaaggaaaaatgggtgtatgttttgatattccaaaagctgaattaaataaaataaaggaa
acatggcaagatacaagacgctggcaactttctgtagcaacagaattgcctgagcttgaa
aatttaccacgtgagggaggccgaaatccaggctcggaattcaggaatggaagacgaaat
ggtggtttcaacaggcctgaccgattcagaaataggggccaaaaacggaactataatcaa
gctttttga
DBGET
integrated database retrieval system
