Pituophis catenifer annectens (San Diego gophersnake): 139318787
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Entry
139318787 CDS
T11059
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139318787 (MMS19)
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139318787 (MMS19)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139318787 (MMS19)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
139318787 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
139318787
NCBI-ProteinID:
XP_070802496
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MAAGGAHVAIGKPASLLQDWEWENAARQAGEGVKTGTCSILDVVEILGTPLKNEDSQVRA
QGIQVLSEVLLQCYPLLQEQEVNHLVLFYENRLKDNHLVIPSVLQGLNALSKCVVLAPGL
AVSVLKAIFQEVHVQSMLQLNRHTVYSIITNFMSNREAELKSLGADFTLGFIQVMDGEKD
PRNLLIAFQIVRDIIVKGYALGPFAEELFEVTSCYFPIDFTPPSNDPHGIQREDLIFSLR
AVLTSTPVFAEFLLPLLIEKIDSDVQSAKLDSLQTLIAACKIYGHKELKEFLPSLWSSLR
TEVFQTASEKIEAECLSALRALSACLSRLVLGADDEDLLDFFLRGVLQDCRHHLCEPDMK
LVWPSAKLLQAAAGASLRAYYQITSSVLPLLLEQYTKHEQSSQHRTVLEVLLGFLELRQM
WDPEEEDKSPLLSCKDALCSIVFSVLAEPNIQLQLVGIQILTFLASRQELLDLADVEKLA
DQFAQFILNEKDSQISLAAMDAAGTLAPVYPEIFSKCLVQKLSKGLESELQDSTSAHQKH
LQALAAVSTHPSIVRQTVPILLQHLQQIQKGKMPASNNSVVSVCHSLQQVALQCQQNAQT
YWYFHQVVVPCLLGLAVQAALEENSQTTLDKVLLTEEALSSMVLVISAACMHLSPELASQ
SVSKVVPLFLDGELSFLPGNNYPSPFHPFQDGPCPTAAPRRLVALLMAFVCSLPRTVAIP
QQDRLLHELLALSCSCDCPFTATAAAKCFAGLINKYPEGSHLDQLLEMAIKTLEQGLNED
PYQRQALTLLLWVSKALLLRYHPLIKQLTDKLLQLLGDSILGSAVGDGFALLMADSTDVL
GKSCHAEVRLMFRQRFFTDCVPQLVQSFHTSTPDVKPNYLKGLSHILNHLPKPVLVTELP
TLLPLLLESLSCSDHVVQLSTLRCIQPLLLDAPHVMHLHIDTLVGKFLNLTDNSAMAIRI
AALQCLHALASLPTPVVIPFKPRVIRALAKPLDDKKRLVRKEAVIARGEWFLLGTPGR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggaggggctcacgttgccataggaaaacctgcctccctgttacaggactgg
gaatgggaaaacgcggccaggcaggcgggtgaaggagtgaagactggaacatgctccatc
ttagatgttgtggaaatcttgggaactcctctgaagaatgaagattctcaagtgcgggca
cagggcattcaagtactctctgaggtcctcctacagtgttatcccctcctccaagagcag
gaagtgaaccaccttgtcttgttctacgagaaccgtctaaaagacaatcaccttgtcatt
ccttctgtgctgcagggactgaacgctctgagcaaatgtgtagtgttagctccaggactg
gcagtgtctgttctcaaagctatcttccaggaagttcacgttcagtctatgctacagtta
aatcgtcatactgtctatagtatcatcactaatttcatgagcaaccgagaggcagagcta
aaaagtttaggtgctgatttcaccttgggctttattcaggtgatggatggagagaaagac
ccacgcaacctgttaatagctttccagattgttcgagacatcattgtaaagggctatgca
ctagggccttttgcagaagagctgtttgaggtgacttcctgctacttccctattgacttt
actcctccctccaatgatcctcatggaatccagagagaagacctgattttcagtctgcgg
gcagtgctgacctctacccctgtttttgctgaattcctacttccattgctcattgagaaa
atagactcagatgtacaaagtgccaaactggattccctgcaaaccctgattgctgcatgc
aagatctatgggcataaagaattgaaagaattcctccctagcctttggtcatccttgcgc
actgaagtgttccagacagcaagtgagaagatagaagcagaatgcttgtctgctttgcga
gctctgtcagcatgtctgtcccgtttggtgctcggagctgatgatgaggatcttctggat
ttctttcttagaggagttctgcaagattgcagacaccatctatgtgaacctgacatgaaa
ctggtgtggccaagcgctaagctcttgcaggcagctgcaggagcttctttgcgggcttat
taccagatcacaagtagtgtacttcctttgctgttggaacagtataccaagcatgagcag
agtagtcagcacaggacagtcttggaggtgttgcttggtttcttggagttacggcaaatg
tgggatcctgaggaggaagacaaaagtccactgctttcttgcaaagatgctctgtgttct
atagtattctctgtcttagctgagcccaatattcaactccaattggttgggatccagatt
ctgacatttctagcatctcgtcaagagctcctggatcttgcagatgtggaaaagcttgca
gatcaatttgcacagttcatcctgaatgaaaaggattcccaaatcagtttggcagctatg
gatgctgctggcacccttgctcctgtctacccagaaatcttcagcaagtgtttggttcag
aagctttcaaaaggactggagtcagaacttcaggacagcacttcagcccatcagaaacat
ctacaagctctggcagcagtatccacccatcctagtattgtaaggcaaactgttcctatc
ctcttgcaacatcttcagcagattcaaaaaggcaaaatgccagcaagtaataattcagtg
gtatctgtgtgccacagcttgcaacaagtcgcccttcagtgccagcaaaatgctcagaca
tactggtatttccatcaggtggtggtgccctgcttgctaggcttagcagtgcaagctgct
ttggaagaaaattctcaaacaacacttgacaaagttctgctaacagaagaagctttatca
tccatggtgttagtcatcagtgcggcctgcatgcacttaagcccagagttggcttcccag
agtgtgtccaaagtggtacctctcttcctggatggagaactttccttcttgcctggaaac
aactatcccagcccttttcatccctttcaggatgggccatgtccaacagcagccccaaga
agactggttgctctccttatggccttcgtatgttcactgccaagaacagtggcaattcct
cagcaggatcggttgttgcatgagcttctagctcttagctgttcctgtgactgcccattc
actgctactgctgctgccaaatgctttgcaggactgattaacaaatacccagaagggtca
cacttagatcagctcttggaaatggccataaaaacgttggaacaaggcttgaatgaagat
ccctatcaacgccaggcccttactctgctgttgtgggtgagtaaagcgttgttgcttcgc
taccacccattaatcaaacagctgactgacaagctactccaacttttgggggactccatt
cttggctctgcagtgggcgatggctttgccttgctcatggccgattctactgatgtattg
ggcaagagctgtcatgctgaggtgcgtctcatgttccgccagcgtttcttcacagattgt
gtgccacagttggtgcaaagtttccacacatccactcctgatgtgaaaccaaattacctg
aaaggcctgtctcacatattaaatcacttgcccaagccagtgctagtgacagagctgcct
acattgctgcctctgttgctagaatctctgtcatgttctgaccatgtggtgcagctttca
actttacgttgcatacagccattgctacttgatgcacctcatgttatgcatctccacatc
gacacacttgtgggcaagtttcttaacctaacagacaattctgccatggcaatccgtatt
gctgcacttcagtgcctccatgcacttgcctccttacctaccccagtggtgatcccattc
aagccacgagtcattcgagcattggccaagcctttggatgacaagaagcgccttgtacgt
aaagaagctgtcatagcacgaggagaatggtttctgcttgggaccccaggcaggtga
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