Pituophis catenifer annectens (San Diego gophersnake): 139318795
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Entry
139318795 CDS
T11059
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139318795 (TRPC1)
Ion channels [BR:
pcae04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139318795 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
DUF2157
Motif
Other DBs
NCBI-GeneID:
139318795
NCBI-ProteinID:
XP_070802506
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MAALYQSADPSASASPNKLLTLKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENNS
GEMNINCVDVLGRNAVTISIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVTFVCLLQKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSL
PKPHAVGCECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLR
ELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTASDEHVDKRGLLEERM
NLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMAGYRRKHTFKKILTVLTVGILWPLLS
FCYLLAPRSQIGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDY
LLLLWLIGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDFAE
RKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFL
LVLFSFTIGLTQLYDKGFTVQEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVA
IFVTRFNYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARA
KLWLSYFDDKCTQPPPFNIIPAPKTICYIFNSLSKWISSHTSSGKVKRQNSLKEWRNLKQ
KRDENYQKVMCCLVHRYLTSMRQRMQSTDQATIENLNELKQDLSKFRNEIRDLLGFRTSK
YAIFYQRN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctataccagagtgcagacccatcggcctcggcttccccgaacaagctgctg
acgttgaaggacgtccggcaggtgaaggaggagaccaccctggatgagaaactgttcctg
ctggcttgcgacaaaggtgattattacatggtgaagaaacttttagaagagaataattct
ggtgagatgaacataaattgtgtggatgtacttgggagaaatgctgttaccataagtatt
gaaaatgagaatctagacattctacagcttctgttggattatggctgtcagtctacagat
gcattattggtggccattgattcagaagttgtgggagctgttgatatattacttaatcat
cgaccaaagcgatccagtagaccaacaattgttacttttgtttgtctgttgcagaaatta
atggaacgtattcagaatccagaatattcaacaactatggatgtggcaccggtcatttta
gctgctcaccgtaacaactatgaaattcttacaatgctcttaaaacaggatgtgtcgcta
cccaaacctcatgctgtgggatgtgaatgtacattgtgtacagccaagaacaaaaaagat
agtttacgtcactccagatttcgtcttgatatttatcgatgtttggctagtcctgcctta
ataatgttgacagaagaggatccaattctgagagcctttgaacttagtgcagacttaaga
gaattaagccttgtagaagttgaattcagaaatgattatgaagaactggctcagcagtgc
aaaacctttgctaaagatttgcttgctcaggcacggaattcccgggagcttgaagttata
ttgaatcatactgcaagtgatgaacatgtggataaacgaggattactagaagagagaatg
aatttgagtcgcctaaagcttgccattaagtataaccaaaaggaatttgtttctcaatct
aattgccagcagtttctcaatactgtctggtttggacaaatggctggttatcgccgcaag
catacatttaagaagattttgacagtcttgacagttggcatcctttggcctctactatct
ttttgttatttattggcaccaagatctcaaataggcagaataattcatactccttttatg
aaatttatcattcatggagcttcttattttacatttttgttattacttaatttgtactca
cttgtctacaatgaagataaaaaaaatacaatgggaccagcattagagagaatagattat
cttctattactgtggctcattggaatggtatggtcagatgttaaaagactttggtatgat
ggcttggaagactttttagaagaatcaagaaatcaacttagttttgtcatgaattctttg
tatttggcaacttttgctctcaaagtagttgcccataataagttccatgattttgctgag
aggaaggattgggatgctttccatcctacacttgtggctgaaggactctttgcttttgct
aatgttctcagttatcttcgactgttcttcatgtatacaacaagctccatcctgggtcca
cttcagatttcaatggggcagatgttgcaagattttgggaaatttcttggtatgttcctt
ttggtattgttctcattcacgattgggttgactcaactttatgataaaggatttactgtc
caagaagagaaggactgtgctgggattttttgtgagcagcaaagcaatgacacattccac
tcgtttattggcacctgctttgctctgttttggtatatcttctcccttgcacatgtagct
atatttgttaccagatttaattatggtgaagaattgcagtcttttgtgggtgctgttatt
gttggcacatataatgtagtagttgtgattgttcttaccaagcttttagtggcgatgctt
cataaaagttttcagctaatagcaaatcatgaggataaggaatggaagtttgctcgtgca
aagctctggcttagctatttcgatgataaatgcacacaacctccacctttcaatattatt
cctgctcccaaaacaatctgctacatatttaatagtctcagtaaatggatttcttctcac
acgtcatcgggcaaagttaagcggcagaacagtttaaaggagtggagaaatttgaagcaa
aagagagatgaaaattaccaaaaggtgatgtgttgtttagtccatcgttacttgacttcc
atgagacagagaatgcaaagtactgatcaggcaacaatagaaaacctgaatgaactcaaa
caagatttatcaaaattccgaaatgaaataagagacttgcttggttttcggacatcaaaa
tatgctatattttatcaaagaaactaa
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