Pituophis catenifer annectens (San Diego gophersnake): 139318831
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Entry
139318831 CDS
T11059
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139318831 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139318831 (DHX36)
03012 Translation factors [BR:
pcae03012
]
139318831 (DHX36)
Enzymes [BR:
pcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139318831 (DHX36)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139318831 (DHX36)
Translation factors [BR:
pcae03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
139318831 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
Ntox8
RsgA_GTPase
NPHP3_N
AAA_23
Sir1
Motif
Other DBs
NCBI-GeneID:
139318831
NCBI-ProteinID:
XP_070802559
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MSYENRRAWGRRDGPRASQSSSSSSSSSSGGGGGAGGGRGGANRGRPPPHLKGREIGLWY
ARRQGERSKEAERQQRAVVHMDERREEQIVQLLNTVQNKNEKEQEAMSWWSDEEGYTNEV
PTKTKPVVENPVVEKAPEKKRPALEKSFLVQDSDYLLQENMPDSDLDEQFKEELRKKKSD
SRYIEMQRFREKLPSHSMRKELVNLINNSRVTVISGETGCGKTTQVTQFILDDHIERGKG
SSCRIVCTQPRRISAISVAERVAAERAESCGNGKSTGYQIRLESRLPRRQGSILYCTTGI
VLQWLQSDKELSSVSHVILDEVHERNLQSDVLMAIIKDLLNVRLDLKIILMSATLNAEKF
SDYFDSCPMIHIPGLAYPVKEYLLEDVIEKLRYMPENTDRRPHWKKRFMQGHISRPEKEE
KEEIYHEQWPDYVKQLKTRYSESTIDALEMIDDDKIDLDLIAALIRYISLEEEEGAILVF
LPGWDNISTLHDLLVSQVMFKSDRFVIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIA
ETSITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHL
YNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIANFLMKLMDPPSRDAVMLSIKHL
KELNALDRQEQLTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAGLSFKDPFIIP
LGKEKLADARRKELSRNSKSDHLTVVNAFKGWEEAQRRGFRYEKDYCWEYFLSSNTLQML
RNMKGQFAEHLLAAGFVNSRNPRDPKSNINSENEKLLKAVICAGLYPKVAKIRANFSKKR
KMVKVSTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPFCLLFFG
GDISIQKDKDQDTIAVDEWIVFQSPARIAQLVKDLKKELDDLLQEKIENPQPVDWNNTKS
RDTAVLTAIIDLITTQENETARNFAPHFQNEQYN
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgagaaccgccgggcttggggccgcagggacgggccccgcgcttcacagtcg
tcgtcctcttcttcttcttcttccagcggtggcggagggggcgccggcggcggcagaggg
ggcgccaaccgcggccgacctcctcctcacctgaagggccgcgagattggcttatggtac
gcacggagacaaggcgagagaagcaaagaggccgagaggcagcagagagctgtggtacat
atggatgagcgcagagaagaacagattgtacaactactgaatactgtccagaacaaaaat
gaaaaagagcaagaagctatgtcttggtggtctgatgaagaagggtatacaaatgaggtt
cctactaaaacaaagcctgtggtggaaaatcctgttgtggagaaggctcctgaaaagaaa
aggccagcactggaaaaatcatttctggttcaagattcagattatctcttacaagaaaat
atgcccgatagtgacttagatgaacaatttaaagaagaactgagaaagaaaaagtctgac
tcaagatatattgagatgcagagatttcgtgagaaattgccttcccacagtatgaggaag
gagctggtcaatcttataaataatagccgggtaactgtaataagtggtgagactggttgt
ggaaagacaacccaagtaacccagttcattttggatgaccatattgaaagaggaaaagga
tcctcttgcaggattgtgtgcactcagcctaggagaatcagtgctatttctgtagcagaa
agagttgcagcagaaagggctgaaagctgtggtaatggaaaaagcactggatatcaaatt
cgccttgaaagccggttgccaaggagacaaggttcaattttatactgcacaacaggaatt
gtcctgcagtggctccagtcagacaaagaattgtccagtgtaagtcatgtaatccttgat
gaagtccatgagagaaatcttcaatcagatgttttaatggcaataattaaagacctcctg
aatgtacgactagatttgaaaataattctgatgagcgctacactgaatgctgagaagttt
tcagattactttgacagttgtcctatgatccatattcctggcttggcttatcctgtcaag
gaataccttttggaagatgtaattgagaaattacggtacatgccagaaaatacagatcgc
aggccacattggaaaaagagatttatgcagggacatataagcagaccagaaaaggaagaa
aaagaagaaatttatcatgaacaatggccagattatgtaaagcaactaaaaacacgatat
tcagaaagtacaattgatgcactggaaatgatagatgatgataaaattgatcttgatttg
atagcagcattaataagatatatttctcttgaagaagaggaaggtgcaattctagtattt
cttcctggatgggataacattagcacactgcatgatcttctggtatcccaagttatgttt
aaatcagataggtttgtcatcatacctttgcattcattaatgcctactgttaaccagact
caggtgttcaaaaagacccctcctggtgttcgtaaaattgtaattgctacaaacattgct
gagactagtatcaccatagatgatgtagtttatgttatagatggagggaagataaaagaa
actcattttgacacgcagaacaatattagcaccatggctgcagaatgggttagtaaagca
aatgccaaacaaagaaaagggagagcaggcagagtccaacccggccactgctaccacttg
tataatggtcttcgtgccagtctgctagatgattatcagttgcctgaaatcctgaggaca
cctttggaggaactatgtttgcaaatcaagattttgaaacttggaggtattgcaaacttt
ttgatgaagctcatggatccaccatcacgtgatgctgtgatgctgtccataaagcatcta
aaggagttgaatgcattggacagacaagaacagttgacgccccttggtgtccacttggca
cgattacctgtggagccacacattggaaaaatgattctgtttggagccttattctgttgc
ttagatcctgttctcactattgcagctggcctcagcttcaaggacccctttatcattccc
ttgggtaaagaaaaattagcagatgcaagaagaaaggaactctcaagaaattctaaaagt
gatcacctgactgttgtgaatgctttcaagggttgggaagaagctcagcggcgtggtttc
agatacgagaaggattattgctgggaatactttctttcttccaataccctgcagatgcta
cgaaacatgaaagggcaatttgcggaacatctccttgcagctgggtttgtgaatagtagg
aaccctagggaccccaaatccaacattaactcagaaaatgagaagttactcaaagctgtt
atctgtgctggactatatccaaaggtggcaaaaatccgagcaaacttcagcaaaaagaga
aaaatggttaaagtttccaccaaaacagatggaacagtgaatattcatcccaaatctgtg
aatgttgaagagacagaattccattacaactggctagtttatcacttgaaaatgaggaca
agtagcatatacctttatgattgtacggaagtttcgccattttgtctcttgttttttgga
ggagatatttcaattcaaaaggacaaagatcaggatacaattgctgtagatgaatggatt
gtttttcagtctccagcaagaatagcacagctggtaaaggatttgaaaaaagaactggat
gaccttctgcaagagaaaatagaaaatccacaacctgtggactggaacaatactaaatca
agggacactgcagtgttgacagctattatagacttaatcactacacaagagaatgaaact
gccagaaactttgcgcctcatttccaaaatgaacaatacaattaa
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