Pituophis catenifer annectens (San Diego gophersnake): 139318880
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Entry
139318880 CDS
T11059
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcae04990
]
139318880 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
pcae04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
139318880 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_Teneurin
EGF_CA
EGF_3
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_4th
cEGF
Pur_ac_phosph_N
fn3_2
DUF601
Motif
Other DBs
NCBI-GeneID:
139318880
NCBI-ProteinID:
XP_070802658
LinkDB
All DBs
Position
Unknown
AA seq
1447 aa
AA seq
DB search
MRGLSGWMVLLVLGSWFRLRAKGAVPLPGFYPFGPAHGDAATPQQDDGGSGLQPIAVKFP
FFGATHTALYVNNNGIISFLKEVSQFTPVAFPISNDRRVVAAFWADVDNRRSGQVYYRET
TDQAILERATKDIAKYFPEFPEFSAQWIFIATWNKVTFFGGNLFSPVNTFQIVLITDGLL
SFTIFNYESITWTTGMHASSGGNLGGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIVDVEM
TTNVGIPGRWVFRIDDAQVQVGGCNNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLA
GFTGKQCQIDVDECASNPCHNKASCISGINSFSCWCAPGFKGATCEIEESPCKTKECQNG
GECQITNTTAVCLCQPGYTGEDCEIEINECESSPCLNGGQCMDLVNNYTCSCATPFTGQH
CEIDPSTCEGRNCRNRQMCNYIRPGRYVCTCSPGYYGNNCQYGGPRMSNACSSNPCQNEG
TCLESSQGYVCECAEGYAGTDCRDKLSDDCECRNGGKCLDGNITVCHCPPGYFGLLCEFE
VTTTPCNMNTQCPDGGYCMEYGGSYLCVCHTDYGTNHTEPPSPCDSEPCLNGGSCDAHED
SYICDCPRGFTGKYCEKARPKLCSSGPCRNGGTCKESDGEYHCTCPYRFTGKHCEIGKPD
PCTSGPCHNGGTCFHYIGKYKCDCLPGYTGRHCDIAPSPCFLHPCKNGATCEDFGNSYVC
ICSAGYTGRHCQSEIDCGIPTEVKHAQLAFNSTKMGSLAIYHCALGYILNSQNNPRLCLA
KGIWSDPPECNEIDECRSQPCLNGGLCKNQIAYYLCLCKAGYTGSNCESEINECQSSPCK
NGGVCKDQPGSFICHCSEGFVGTQCEMEVDACKSNPCRNRGSCESHSGSYLCVCPEGFLG
YHCESVSDPCFFNPCGNRGYCLPTNESHICTCKVGYTGRNCEKELLPPMSLKVEKVEENG
LSISWRPPKDQAAKHIIDGYAVTYVSFDGSYRWTDYVDRSRAAHHLRALASGKAYNISVF
SVKRKSNNKNDISRPIMLVTRTRPHPVEGFEIANVTSTTITVQWALHKLKHATVSKVRLS
IRQPEDVEDHAVELNNTRTKYTFWDLQPGQKYLIHMWTLSGLSSEDHATESFATSPFYVW
TRPLPPRNLTASRVAATSVQMTWEQPLVGSVEGYIINVSTSQSVKSRYVPNGKLFSYTVR
DLNPGQRYRLSVMAVQNTDQGQVMSEPAHLYITALQKDGTSERRWSQTGHPRMLRNRVPP
TFLPELHVLAEHSVPEEPSLTARFTELVDGRGRITTKISSSPSRSVSVKTQPEALTKVEE
NVEESTSRAKLAVQLSEPESTKRESERQNCSINFCKNGGTCVAGLESYNCDCTPGFKGRL
CELACKKVPQSCTRLYSETKSFPVWEGGVCHYLYKRVYKVHQDICYKESCESTGTNKALS
RKQINRH
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcctgtccggatggatggtgctgctggtgctcggcagctggttccgtctgcga
gcaaagggcgccgtgccgctgcctggcttttatcccttcgggccggcgcacggggacgcg
gccacccctcagcaagacgacggcggttctgggctccagcccatcgccgtcaagttcccc
ttcttcggtgcgactcacacagcgctctacgtaaacaacaatggaatcatctccttcttg
aaagaggtatctcagttcacccctgtggcgttccccatttccaatgaccgacgtgttgtt
gccgcattctgggctgatgtcgataaccggcgttcaggacaagtgtattaccgggaaacc
acagaccaagctattttggagagagccactaaggatatcgcaaaatatttcccagaattc
ccagagttctctgcccagtggatattcatagcaacttggaacaaggttaccttctttgga
ggaaacttgttttctccagtaaatactttccagatagtcctcatcactgacggcctgctt
tccttcactatcttcaactatgaatcaataacctggaccactggcatgcatgccagcagt
ggaggaaatttaggaggcctgggagggatagcagcccaggcaggtttcaatgccggtgat
ggaaaacggtattttaacatccccggatcccgcactgatgacattgtcgacgtggagatg
acgacaaatgtgggtatccccgggcgctgggtattcagaatcgatgatgcccaggtgcaa
gtggggggctgcaacaacacaacttcagtgtgtttgacacttcgtccttgcttgaatgga
ggaaaatgtattgaggactgcatcacagggaacccttcatacacttgttcttgtctcgct
ggtttcactggaaaacaatgccaaattgatgtggatgagtgtgcttccaatccatgtcat
aataaagcatcttgtatcagtggcatcaacagcttcagctgttggtgtgcaccaggattt
aaaggagctacatgtgaaattgaggagtctccatgtaaaaccaaagaatgccaaaatggt
ggggagtgccaaataacaaacacaacagctgtctgcctttgtcagccaggttatactgga
gaagactgtgaaatagaaataaatgaatgtgagtccagtccgtgtctgaatggtgggcaa
tgtatggatcttgttaacaactatacttgttcctgtgcaacaccttttactggacagcat
tgtgaaatagatccttcaacctgtgagggcagaaattgcaggaatcggcagatgtgcaac
tatattcgcccagggcgctatgtctgcacatgctcaccaggctactatgggaacaattgc
caatatggtggccctagaatgtctaatgcctgtagctccaatccatgccagaatgagggc
acatgtcttgaaagcagtcaaggttatgtttgtgaatgtgcagaaggctacgcaggcact
gactgcagagataaactctcagatgactgcgagtgtcgaaatggaggaaaatgcctggat
ggaaatatcactgtgtgccattgcccacctggatattttgggcttctttgtgaatttgaa
gtgactactacaccttgcaatatgaacacccagtgccctgatgggggttattgtatggag
tatggtggcagttacctttgcgtgtgccatacagattatggcactaatcacactgagcca
ccctctccatgtgactcagagccctgcctgaacggcggatcttgtgatgctcatgaagac
tcctacatctgtgactgtccccgaggcttcactggaaaatattgtgagaaagcaagaccc
aaattgtgcagctctgggccctgccgcaatggagggacctgtaaggaatcagacggggaa
taccactgcacctgtccctaccgctttacagggaaacactgcgagataggtaaacctgat
ccttgtacctcaggaccttgtcataatgggggcacctgtttccattatattggcaagtac
aaatgtgactgcctgcctggatacactggacggcactgcgacatagctccttctccttgt
ttcctgcatccatgcaaaaatggggccacttgtgaggattttggcaacagctatgtctgc
atatgctctgcaggttacacaggaagacactgccaatcagagattgactgcggaatcccc
actgaagtgaagcatgctcagttagcatttaactccactaagatgggctccttggcaata
tatcactgtgctcttggttatattctgaattcccaaaataaccctcgcctatgtttggca
aaaggcatctggagtgacccaccagaatgcaatgaaattgatgagtgtagatcacaaccc
tgtctgaatggggggttgtgcaaaaatcaaattgcctattacctttgcttgtgtaaagct
ggctatacaggaagcaactgtgagtcggaaattaatgaatgtcaatctagcccatgcaaa
aatggtggcgtctgcaaagaccagccaggatcatttatctgtcattgttctgaaggcttc
gttggaacgcagtgtgaaatggaagtggatgcctgcaaatcaaatccatgtcggaatcga
ggaagttgtgaaagtcacagtggttcttacctgtgtgtttgtccagagggcttccttggc
tatcactgtgagtcagttagtgatccctgtttcttcaatccatgtggaaatagaggctac
tgtctaccaactaatgaatcccacatctgcacctgcaaagtgggctatactggcaggaat
tgtgagaaagagctgctgccaccaatgtcattaaaggtggaaaaagtggaggagaatggg
ttgtcaatctcttggcgcccacccaaggaccaggctgccaaacatataattgatggctac
gccgtgacgtacgtatccttcgacggctcttaccgctggactgattatgtggaccgaagt
cgtgctgcccaccatttgcgggcactagcctccggcaaagcctacaatatttctgtcttt
tcagtcaaacgcaaatcgaataacaagaatgatatcagcaggcccatcatgctcgtcact
cgtactagacctcacccagtagaaggatttgaaatagccaatgtgacttccacaaccatt
actgtgcaatgggctcttcataaactcaaacatgccacagtcagcaaggtgcgcctgtcc
atacggcagccagaagatgtagaggatcatgctgtagaattaaacaatactaggaccaaa
tacacattttgggaccttcaaccaggacagaagtatcttatccatatgtggaccttgagt
ggccttagtagtgaagatcatgccacagagagctttgctacatctcctttttacgtctgg
acccgacctctgcctcctagaaacctcactgcatccagagttgcagccacctctgtccag
atgacttgggaacaaccccttgtgggctcagtggaaggctacatcatcaatgtcagtacc
agccagagtgtaaagagccgctatgtccccaatggaaaattgttttcctacaccgtgcgt
gacctgaacccaggtcaaaggtatcgcttatctgtgatggctgttcaaaatactgatcaa
ggacaagtgatgagtgagccagcccatctttacattacggccttgcagaaagatggaacc
tctgaaagacgctggagccaaactgggcatccacggatgctgagaaatagagtgccccca
actttcctaccagaattgcatgtgcttgctgagcactctgtccccgaggagccctcacta
acagccaggtttacagaactagtggatggcagaggaaggatcactactaaaatcagcagc
tctccaagtcgatcagtttctgtgaaaacacaaccagaagctctcacgaaagttgaagaa
aatgtggaggaatcaactagtcgggccaaactagcagtgcagctgtcagaacctgagagt
accaagagagaaagtgagaggcagaattgttccataaacttctgcaaaaatggtgggacc
tgtgttgctggattagagtcttataattgtgactgtactccaggattcaaaggcagatta
tgtgaactagcttgtaaaaaagtgcctcagtcttgtactcggttgtactctgaaacaaaa
tcttttccagtctgggaaggaggtgtctgccattatctatacaagagagtctacaaagtg
caccaggacatttgttataaggagagttgtgagagtactggaacaaataaggcactcagc
agaaaacaaatcaacaggcactga
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