Pituophis catenifer annectens (San Diego gophersnake): 139318982
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Entry
139318982 CDS
T11059
Symbol
SOX10
Name
(RefSeq) transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139318982 (SOX10)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139318982 (SOX10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
139318982
NCBI-ProteinID:
XP_070802700
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MTDDQDLSEVEMSPVGSEDHHCLSPGPSMASDTNSHLNNSSNGEMGKVKKEQQDTEADDD
KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSSKSKPHVKRPMNAFMVWAQAARRKLADQY
PHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQG
ENDGQADGEAGGAAAIQAHYKNAHLDHRHPGEGSPLSDGHPEHSSGQSHGPPTPPTTPKT
ELQTGKADSKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMEPFDVNEFDQYLPPNGHA
AHPGHVGGYATAAGYGLGSALAAASGHSAWISKQHGVSLSAATSSVVDSKTQVKTEGSTP
GGHYTDQPSTSQLAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAF
SYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgatcaagacctttctgaagtagaaatgagtcctgttggttctgaagatcat
cactgcctttcgccaggaccttccatggcatcagacaccaactctcatcttaacaactcc
agcaatggtgagatggggaaagtgaagaaggaacaacaagacacagaggcagatgatgat
aagtttccagtgtgcatcagggaggcagtgagccaggtactgagtggttatgattggacc
ctagtgcctatgcctgtgcgtgtcaatggaagcagcaagagcaagccccatgtcaagcgg
cctatgaatgccttcatggtgtgggctcaagcggcccggaggaagctggctgatcagtat
cctcaccttcacaatgcagaacttagtaagacgcttgggaagctctggagattactgaat
gaaagtgacaaacggcctttcattgaagaagcagagcggctacggatgcagcacaagaag
gaccaccctgattataagtaccaaccacggcgtcggaaaaacggcaaggctgcccaagga
gaaaatgatggccaggctgatggggaagctggtggagctgcagctattcaagcccactat
aagaatgcccatttggaccataggcatcctggagagggatctcccttgtctgatggacac
cctgaacattcttcaggtcagagccatggacctcccactccaccaactacaccgaagaca
gagctccagacgggtaaggctgactccaaacgggatgggcgttcccttggggaaggagga
aaaccccacatcgactttggcaacgtggatatcggggagatcagccacgaagtgatgtcc
aatatggagcccttcgatgtcaacgagtttgatcaatatcttccaccaaatggacacgct
gctcacccaggccatgtgggaggttatgccacagctgcaggttacggccttggtagtgcc
ctggctgcagccagtggacactctgcctggatctccaagcagcatggagtctctttgtct
gctgccacatcctcagtggtagattcgaagacacaagtaaaaacagagggctctacccct
gggggtcattatactgaccaaccctccacttcccagttagcttacacatcactcagtctg
ccccattatggctcagctttcccctctatatccaggccccagtttgactatcctgatcac
caaccttcaggaccctattacagccactctagtcaggcttctggtctctactcagccttc
tcatatatgggtccctctcagcgtcctctgtacactgccatctctgacccagccccttca
gtgccacagtcccacagtcccacacactgggaacagcctgtgtatacaaccctctcaaga
ccctag
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