KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139319095
Entry
139319095         CDS       T11059                                 
Symbol
PREB
Name
(RefSeq) guanine nucleotide-exchange factor SEC12
  KO
K14003  prolactin regulatory element-binding protein
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    139319095 (PREB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcae04131]
    139319095 (PREB)
Membrane trafficking [BR:pcae04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    139319095 (PREB)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Prp19 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I PEP5_VPS11_N Beta-prop_SCAP ELYS-bb Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 139319095
NCBI-ProteinID: XP_070802862
LinkDB
Position
Unknown
AA seq 419 aa
MSPRRPPELYRAPFPLYALRIHREAGLALIAGGGGAAKTGITNGLHFLQLHWRDGKLSAS
LLHAHDTETRATMTMALAGNFIAAGQDATCHILSFQLFKSGQKTGGSSGDSAKAGAGDKD
LRRRKAPVPNEKSNGNTHREMTEVAVETLRCVQTDTSPDTLQKAVCFSDDHTLMATGGVD
GFLRVWEFPSMKKTLEFQAHNGEIEDIALGPDNKVVTVGRDFQCCVWQRDQMVTGLRWNE
NLPGIPDKTYRYQSCKFGTVEDQAKALRLYTVQIPYKRERRPLPCYITKWDGHSFLPLLT
RPCGNEVISCLSVSETGTFLGLGTVTGSVAIFVAFSLQRLYYVREAHGIVVTAVAFLPET
PELLKSNEAALLSVAVDSRCRLHQIACRRSFPIWLLLLFCAGLIVGTVLLLQLAFPGFL
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgtcccctcgtcggccgcccgagctctaccgggctccgttcccgctctatgccctccgc
atacaccgtgaagctggactagcgctgatcgcggggggaggcggcgctgccaagacgggg
atcaccaatggcttgcatttcttgcagctgcactggagagatggcaagttatctgcctcg
ctgctacatgctcatgacacagagacccgggccaccatgactatggcgctggcaggaaat
tttattgctgcagggcaggatgctacttgccacatcctgagtttccagctctttaaatct
gggcagaaaacaggtggcagcagcggcgatagtgctaaagcaggtgctggtgataaggat
ctacggagacgcaaggcccctgtccccaatgagaaaagcaatggcaatacacacagggag
atgacggaggtggcagtggaaactttgcgctgtgtccaaacagacaccagcccagatact
ctacagaaggctgtgtgcttcagtgatgatcatacccttatggctactggtggcgtggat
ggtttcctgcgagtctgggagtttcccagcatgaagaaaactcttgaattccaggcacac
aatggtgagatagaggatatagcactgggtcctgataacaaggtggtgacagtgggacgg
gatttccagtgttgtgtgtggcaacgagatcagatggtgacgggtctgcgttggaatgaa
aatcttccaggcattccagacaagacctaccgctaccagtcttgcaagtttggtacagtt
gaggaccaagccaaggcattgcgactgtacacagtgcagatcccctacaagcgtgaacga
cgtccacttccctgctacatcaccaaatgggatggacatagtttcctgcccctgctcact
cgtccctgtggcaatgaggtcatctcatgcctctctgtaagtgagacaggcacattcctg
ggtttgggcactgtcacaggctcggttgccatcttcgtcgccttttctttgcagaggctg
tactatgtgcgggaagcacatggcatagtggtcactgctgtggcctttctgcctgagact
ccagaactgctcaagagcaacgaggcagccctgctaagtgtggcagttgacagccgctgc
cgcctgcaccagattgcctgccggcggagtttcccaatctggctgctgctgctcttctgt
gctgggctgattgtgggcacggtcctgttactacagttggccttcccagggttcctctaa

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