Pituophis catenifer annectens (San Diego gophersnake): 139319176
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Entry
139319176 CDS
T11059
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04110
Cell cycle
pcae04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139319176 (SMC1B)
04114 Oocyte meiosis
139319176 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139319176 (SMC1B)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
139319176 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
139319176 (SMC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
139319176
NCBI-ProteinID:
XP_070803001
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MGYLKFLLVENFKSWRGQQCIGPFKKFTCIIGPNGSGKSNVMDALSFVMGEKTSNLRVKH
IQELIHGAHVGKPVSSSGSVTMVYVEENGEQKKFSRIIRGNGSEFLVNDTAVNRSMYTKA
LAEIGIIARAKNCLVFQGEVEAIAMKKPKERTQLFEQISNSGELAAEYAEKKRDLQKSEE
DAQFSYNKKKNIAAERKRAKLEKEEAEHYQELFEELTEHKKQLQLFRLYHNEQKINFLNN
KVAEKTKTIGTKKMAVSRAEETMKAKKSAFGVLTRSSQHIEKEIRALEIILNQKRPQYIK
AKEKTSHQIKKVDMAKNKLRDHMKEQAKQEEGKRELELELIEIDKAWRAFEKRVEEEAQH
REREVFLEESQVNRYQELKELVHKKVATLTQQREKLLWEQKTDTEKMSFDRRRQKETEEN
IKHVLEQIEDNERRMEKLVEYSRTCSESLEEKKQEEETLTNEIQTSKIRIAKINEELSKV
VSDLQNARIDVHEGKRQQKRAENLESLKRLYPDFVVGRLVDLCHPIHKKYQLAVTKVFGK
YMTAIVVASEKAARNCIRFLKEERAEPETFLPLDYLEVEPINEQLREIRGAKLMIDVIQT
SFPPLKKVIQFVCGNGLVCETVKEAKQLAFDGQHRLKTVALDGTLFLKSGIISGGSSYLK
LKAKYWEEKEINELKERREKLMDELKILLKIKHKEADLKHLQAQCQGIQTRYKYSQNELE
ILKKKRLANFYKEKSMLESEMVNIQSQYTMLNEGVLQRTEKMNELKKKINEVEDNVFHEF
CEEIGVENIRVYEKEHIQKQEEVDNKRSEFENQKTRLNTQLEFINSLVEKMVKKNSMLKA
EIHKEEAEIIHLKKDEENFLQMVNEVMEELQHLRERQNISKSDVAKAQSEVEESRKALLT
LNRELATLQKEAGAIETSLEQKKLERHNRLLDCKLQDLRINLLLGSLDDISEIELEPDTE
STEVSADIYEREEALQIDYSSVRKQLKELQSDKEIETHLEQLQQEVACEENVLLKTTAPN
LKALEKLHIVTGKFQESLNAFEVHRKEARLCRQEFEKVKKKRYERFSQCFEHVSVAIDQI
YKKLCRNNSAQAFLSPENPEEPYLGGIGYNCVAPGKRFMPMDNLSGGEKSVAALALVFAM
HSFRPAPFFVLDEVDAALDNTNIGKVSSFIRQQSEERFQIIVISLKEEFYSKADVLIGVC
PKQDDFMFSQILILDLTRYPDSEENERQRSKKSSLL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggatacttaaagtttttgctggttgagaatttcaaatcctggcggggacagcaatgc
attggaccattcaagaaattcacttgtatcattggtcctaatggctcagggaaatcaaat
gtaatggatgccctcagctttgtaatgggtgaaaagacgtctaatttaagagtgaagcac
attcaggaactgatacatggggctcatgttggaaagccagtttcttcaagtggaagtgta
acaatggtttatgtagaagaaaatggggaacagaaaaaattttcaaggattattcgaggc
aatggatctgagtttcttgttaatgatactgctgtcaaccgatctatgtatacaaaggca
cttgcggaaattggcataattgcaagagcaaagaattgtctagtatttcagggtgaagtt
gaagcaattgcaatgaagaaacccaaagaaagaactcagctatttgaacaaattagtaac
tcgggagagcttgctgctgaatatgcagaaaagaagagggatttgcaaaagtcagaagaa
gatgcgcagttcagttacaacaagaagaaaaatattgcagctgagcgcaaacgcgcaaaa
ttagaaaaagaagaggcagagcattatcaggagttgtttgaagaactgacagaacataaa
aagcagttgcaacttttccgattgtatcacaatgagcaaaaaatcaattttctcaataat
aaagtggctgaaaaaactaagactattggtactaagaaaatggctgtttctcgtgcggaa
gaaaccatgaaagctaagaaatctgcttttggggtgttaactagaagcagtcagcacatt
gaaaaagaaattagggctctagaaattatattgaaccaaaagaggcctcagtatattaaa
gcaaaggaaaaaacttctcaccaaattaaaaaagtagatatggctaaaaataagttaaga
gatcatatgaaagagcaagctaagcaagaagaaggcaaaagggaattggagctagagtta
attgagattgataaagcttggagagcatttgaaaaaagggttgaagaagaggcacaacat
agagaaagagaagttttcctggaagaaagtcaggtaaatcggtatcaagaattgaaagaa
ttagttcataaaaaagtagccacattaactcagcaacgggaaaaactgctatgggagcag
aagacagatacagaaaagatgtcatttgatcggcggagacaaaaagaaactgaggaaaat
ataaagcatgtcttagaacagatagaagataatgaaagaagaatggagaagcttgtggaa
tacagtaggacatgctcggaatctttagaagaaaaaaagcaagaagaagaaacactgaca
aatgagattcaaacttcaaagatcagaatagccaaaataaatgaagaactgagtaaagtt
gttagtgatttgcagaatgctagaattgatgtccatgaagggaaacgccagcagaagagg
gcagaaaatttggagagcctcaaaagattatatcctgattttgtggttggaagacttgta
gacttgtgtcaccccatccataaaaaataccagcttgctgtcaccaaagtctttggcaaa
tacatgactgcaattgttgtggcctcagaaaaggcagctagaaattgcattcgtttcctc
aaggaagaaagagctgagccggaaacattccttcctctggattaccttgaagttgaacca
atcaatgaacagttaagagaaataagaggagcaaaactgatgatagatgtcatacaaaca
tcttttcctccattgaagaaagttattcagtttgtctgtggaaatggccttgtatgcgaa
acagtaaaggaagcaaaacagttagcatttgatggccaacatcgactgaaaacagtggct
cttgatggaactttgtttttgaaatctggaataatttctgggggctcaagttatttgaaa
ctaaaggctaaatattgggaagaaaaagaaataaatgaacttaaggaacgaagggagaaa
ctaatggatgaactaaagatcttactgaaaattaaacataaggaggctgatttaaagcat
ttacaagctcagtgccaaggaattcaaacacgatacaaatattcacaaaatgaactggag
attcttaagaaaaaacgtctggctaatttctacaaggaaaaatctatgctggaaagtgaa
atggttaatatacagtcccaatacaccatgctgaatgaaggagtcttacaaagaactgaa
aaaatgaatgagcttaaaaaaaaaattaatgaggtggaagacaatgtttttcatgaattc
tgtgaagaaattggtgtagagaacattcgtgtatatgaaaaagaacacatacaaaagcaa
gaagaagttgacaacaagagatctgaatttgaaaaccagaagacaagactaaatacacaa
cttgagtttattaacagtcttgtagaaaagatggtaaagaaaaatagcatgctaaaggca
gagattcacaaagaagaagctgaaataattcacctgaaaaaggatgaagaaaacttttta
caaatggtaaatgaagtcatggaagaattacagcatcttagggaaaggcagaatattagt
aaaagcgatgttgcaaaagcacagagtgaagttgaagaatcaaggaaggcattattaact
ttaaatagagagttagcaacattacaaaaggaagcaggagctattgagacctctctggaa
cagaagaaattagaaaggcataacaggcttcttgattgcaaattgcaagatctaaggata
aaccttcttttgggatctctggatgacattagtgaaattgagctggaacctgatactgaa
agcacagaagtctctgcagatatctatgaaagagaggaggcacttcagatagactatagc
agtgttagaaagcagttaaaggaattgcaatctgacaaagagattgagactcacttagaa
caacttcagcaagaagtggcatgtgaagaaaacgttttgttaaaaacaacagcaccaaat
ctcaaagcactggagaagcttcatattgttacaggcaaattccaagaatccctcaacgca
tttgaagtccataggaaggaagccagattatgtaggcaagaatttgaaaaagtgaaaaaa
aagagatacgagagattcagccagtgttttgagcatgtgtcagtcgctattgatcagatc
tacaagaaactttgtagaaacaacagcgctcaggccttccttagtccagagaatcctgaa
gaaccttacttgggaggcatcggctataactgtgtagctcctgggaaacgatttatgcca
atggacaacctgtcaggtggagaaaagtctgttgcagctctggctcttgtgtttgcgatg
cacagttttaggcctgctccattctttgttttagatgaagttgatgcagctctagataac
acaaacattggaaaagtatcaagctttattaggcagcaatcagaagaaaggtttcagatt
atagttatttctttgaaggaagaattctattctaaagcagatgttttaattggagtctgc
cctaaacaagatgactttatgtttagtcagatactgatcctggatcttactcgatatcca
gactctgaggagaatgaaaggcagagatcaaagaagagctctctgctttaa
DBGET
integrated database retrieval system
