Pituophis catenifer annectens (San Diego gophersnake): 139319228
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Entry
139319228 CDS
T11059
Symbol
POC1B
Name
(RefSeq) POC1 centriolar protein homolog B
KO
K16482
centriolar protein POC1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139319228 (POC1B)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcae03037
]
139319228 (POC1B)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
139319228 (POC1B)
Cilium and associated proteins [BR:
pcae03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139319228 (POC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
CFAP251_N
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_TEP1_C
ANAPC4_WD40
DSE1_N
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
Ge1_WD40
Beta-prop_WDR41
ASA1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_NOL10_N
BCAS3_WD40
PAC11
eIF2A
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_NWD2_C
WD40_like
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
PROPPIN
Toxin_R_bind_N
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
139319228
NCBI-ProteinID:
XP_070803088
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MASALEDPVLIRHFKGHKDAVTCVAFSPNTKVLATSSLDRFLMIWNLRPNTKAFRFVGHL
EAVTSVQFSPDGYLLASASEDRTARLWIPCIHGESTSLKGHTAPVRSVNFSNDSQFLVTA
SNDKSVKVWSICSQNLLYSLSHTHWVRCAKYSPDGRLIVSCSEDKTVKIWDIRNKICINN
IIDYDGFANYVDFNPDGTCIVSAGSDHTVKFWDIRINRLLQRYKVHRGSVNYTSFHPSGN
FLITASNDGTLKIMDLIEGRLLYTLHGHEGPVLSVAFSKDGETFASGGTDTQVLLWKTNF
DSSEYKKVLERHVQRLHSDDPPHLLDIYPQSPHRHDAKSQAVEINPNSDVTNMQILDPPV
VNIASSPTYPPSWQLRTNPSVAHWSMHQNGMNNEDIQHPPMLPSPAMLKRNLKGEMMHTV
AGPGTMDESVGISPVLTTALEHIVEQLDVLTITVSILEQRLTLTEDKLKECLQNQGKLLH
SVRLREETT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgctctggaagatcctgttttgattcgtcattttaaaggccacaaagatgca
gtcacttgtgttgctttcagtccaaatactaaagtgcttgccacctcttctctggacagg
tttctcatgatatggaatttgaggccaaatacaaaagccttcagatttgtgggtcattta
gaagctgtaactagtgtacagttttcaccagatggatacctgttggcatctgcttctgaa
gaccgaactgccagactatggattccttgcatccatggcgaatccacatcattaaagggc
catactgccccagtccgcagtgtgaacttctcaaatgacagtcagtttctagtcactgca
tctaatgacaagtcagtgaaagtgtggagcatttgcagccaaaatcttttgtattcttta
tcccatacacactgggtgcgttgtgcaaaatattcaccagatggaagattaatagtgtct
tgcagtgaagataaaactgttaaaatctgggatataagaaacaagatatgtattaataat
ataatagattatgatgggtttgcaaactacgtagattttaatcctgatggtacatgtata
gtttctgctggttctgatcacacagtgaagttttgggacattcgaataaacagattactg
cagcgttataaagttcacaggggaagtgttaattacacatctttccatccttctggcaac
tttctcataacagcatctaatgatggaactcttaagattatggatcttatagaaggaaga
ctcttatacacacttcatgggcatgagggtcctgtgctttctgtagctttttcaaaagat
ggagagaccttcgcttctggtggcacagatacacaggtgctgctctggaagacaaatttt
gattcctctgaatataagaaagttcttgaaagacatgtacaaagattacatagtgacgat
ccacctcacctcctggatatttaccctcagtcacctcatcgccatgatgcaaaatcacag
gcagttgagataaatcccaactctgatgtaacaaatatgcaaatattagatcctcctgtt
gtaaacattgcttcatcacctacttatcctccatcatggcagttgagaacgaatccatct
gtagcccattggtctatgcaccaaaatgggatgaacaatgaagacatccagcatcctccc
atgttaccttctccagcaatgttaaaaagaaatttgaaaggggaaatgatgcacactgtg
gctggaccaggaaccatggatgagtctgtgggcatttcaccagtactgactactgccttg
gaacacattgtggagcaattagatgttctgacaattacagtttcaatcttggaacagcgc
ctgactttaactgaagataaattaaaagagtgcttacagaaccaagggaaactattacat
tcagtcagactgagagaagaaacaacataa
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integrated database retrieval system
