Pituophis catenifer annectens (San Diego gophersnake): 139319307
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Entry
139319307 CDS
T11059
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcae01001
]
139319307 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139319307 (TRIM24)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139319307 (TRIM24)
Protein kinases [BR:
pcae01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
139319307 (TRIM24)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139319307 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
ANCHR-like_BBOX
PHD-1st_NSD
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139319307
NCBI-ProteinID:
XP_070803217
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MDESPVIAGPCLAGPVAMGGENEAESRQGPADRANGESRLNLLDTCGVCGQHIQSRRPKL
LPCLHSLCQRCLPSPHRYLMLPPPAALSPGGGGSGGGGGPPKDPPLPPPPPLLQPSSAPS
SPVSAPPSPLHCNPVGVVRCPICGQECAERHIIDNIFVKDTTEVPSSTVEKSNQVCTSCE
DNAEANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTNQRPVFCPYHK
KEQLKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKSKYIKYT
GEQIQNRIHEVNRNQKLVEQDVKVAIFTLMVEINKKGKALLHQLECLAKEHRAKLLQQQQ
EVSGLSKQLEHVMNFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDALPVSNTTIQFH
CDPSFWAQNIFNLGSLVIEDSELPPHMPKSPVTEPNIQPQSGLSSNQLSKFPTQISLAQL
RLQHMQQQVLAQRQQAQRRAGPVGLPEPRIAGPVHQTPPPPSLPPPPPPQQPPPRLVNFQ
NHNFKSIGPIPLAQPVKFPQNQSIPHASVKPSPLQMAILAQQAIKQWQIHSGQVLATSSS
ASSTTSTPSSPTINSAAGNDGKTFAPSMIDLNSTMGGSCILPSLPDIDCSGSVPLESIGK
REAFAEHTQTKQSSRKTVQSPNSSVPSPGLSGSVTVSGVHPPMRSPSASSVGSRGSSTSS
GKPSGADSTQRVPVVMLEPIRIKQESGVPSENYDFPVVTVKQETDEESRNQNSRFPRAIL
PSLLLNSNLSSEASVLRTEAPDSTGDQPSNGKATWIGSPHGEDGRKDDDPNEDWCAVCQN
GGELLCCDKCPKVFHLSCHVPTLRNFPSGEWICTFCRDLSKPEVEYDCDVSSHVSEEKRK
LEGGPGLAPIDQRKCERLLLYLYCHEMSLAFQDPVPPTVPDYYKIIKKPMDLSTIKKRLQ
AHHIMYTKPEDVIADFRLIFQNCAEFNEPDSEVADAGMKLSSYFEELLKKFFSDRKFSVQ
PYCHSDKTSPAPTDDSDDEFVQPRKKRLKWEEHHFFK
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcccctgtgatagccgggccctgcctggctggtccggtcgccatgggtggg
gagaacgaagctgaaagccggcaaggccctgcggaccgagctaacggagagtcgcgcctc
aacctcttggacacttgtggggtgtgcgggcaacacattcagagtcggcggcctaaactg
cttccttgccttcactcgctctgtcagcgttgcctaccttcgcctcatcgctacctcatg
ctgccacctcccgcagccctttcgccgggcggcggcggtagtggcggcggcggcggcccc
cccaaagatccgccgctgccgccgccaccgccgctgcttcagccgtcctcggcgccttct
tcgccggtctccgcgccgccttcgccgttgcactgtaatccggttggtgttgttcgctgt
ccaatttgtggccaggaatgtgcagaaagacacattattgacaacatctttgtgaaggat
actactgaggttcccagtagtacagtggagaagtcaaatcaggtttgtacaagctgtgaa
gacaatgcagaagccaatggcttttgtgtggagtgtgtagagtggttgtgcaagacgtgt
atacgggctcatcaaagagtgaaattcacaaaagaccatacagttagacagaaagaagag
gtttctccagaagctgttggtgtaaccaatcaaagacctgtgttctgcccttatcacaaa
aaggaacagttgaaactctattgtgaaacttgtgacaaattgacatgtcgggattgtcag
ttgctggagcacaaagaacacagataccagtttatagaagaagcctttcagaatcaaaaa
gtaataattgacactcttattacaaaattgatggaaaaaagcaagtatataaaatataca
ggggagcagattcaaaatagaatccatgaagtgaatcggaatcaaaaactggtggaacaa
gatgttaaagttgctattttcacattgatggtagaaataaacaaaaagggaaaagctctg
ctacatcagcttgagtgtctagctaaggaacaccgggcaaagcttttacaacagcagcaa
gaagtgtcaggactttctaaacaactggaacacgttatgaacttttctaaatgggctgtc
tccagtgggagcagcacagccttattgtacagcaaacgcttgattacataccgattacga
tacctccttagggcaaggtgtgatgccttaccagtatctaatactaccattcaatttcac
tgtgatcctagtttctgggcccaaaatattttcaacttaggttctttggtaattgaagat
agtgaactcccacctcatatgcctaaaagccccgtgacggaaccaaacatacagccacaa
agtggcttatcttcaaatcaactatccaagttcccaacgcagatcagtttagctcaactt
cgacttcagcacatgcagcagcaagtgcttgctcagaggcagcaggcacagcggagggca
ggtcccgtgggtctcccagaacctagaattgcaggacccgtgcaccagactcctccacca
ccatcactaccacctcctccacctcctcagcagccacctccacgtttggtaaactttcag
aatcacaatttcaaatccataggaccaattcctctggctcagccagtgaagtttcctcaa
aatcaaagcataccacatgcatctgtaaagccatctccactgcaaatggcaattttggca
cagcaagccattaaacagtggcagatccacagtggtcaagttttggctacttcatcgagt
gctagcagtacaacttcaactccctccagtcccactattaatagtgctgctggaaatgat
gggaagacttttgctccatctatgattgatcttaattcaacaatgggtggttcctgtatc
ttgccttctttaccagatattgactgttcaggaagtgttccattggaaagtattgggaag
agagaggcatttgcagagcacacccaaaccaaacaatcttcacgcaaaactgtgcagtct
cctaactcttcagttccatctccaggactttctgggtcggttactgtctctggtgtccat
cctccaatgcgttcacccagtgcctctagcgtaggaagtcgaggcagctctacttcttct
ggtaaaccatcaggtgcagattcaacccagagagtccctgtggtcatgttagagcctatc
agaataaaacaagaatctggtgtaccaagtgagaactatgatttcccagttgtcacagtg
aagcaggaaacagatgaagaatcccgtaatcaaaattccagattcccaagagccattctt
ccctcattgttactgaatagcaacctctcctctgaagcatccgtgttgagaacagaagca
ccagacagtacaggtgaccagccatccaatggcaaggcaacatggataggatctccacat
ggtgaagatggcagaaaagatgatgatcctaacgaggattggtgtgcagtatgtcagaat
ggaggagaacttttgtgttgtgataaatgtcccaaagtgttccatctttcatgtcatgtt
cctacactcaggaattttccaagtggcgaatggatttgtacattctgccgtgatttgtct
aaacccgaagtagaatatgattgtgatgtctcaagccatgtttctgaagaaaaaagaaaa
ctggaaggtggtccaggcttggcaccaatagatcagaggaaatgtgaaagattacttctg
tacctttactgccatgaaatgagccttgcttttcaagatccagttcctcccacggtgcct
gactactacaaaataattaagaagccaatggatttgtcaacaataaagaagagattgcaa
gcacatcacataatgtatacaaagccagaagatgttatagctgatttcaggctaatattt
caaaattgtgctgaatttaatgagcctgattctgaagtagctgatgctggaatgaaacta
agttcttattttgaggaacttttgaagaaatttttttcagatagaaagttctcagttcag
ccttattgccattctgataaaactagtccagccccaacagatgactcagatgatgaattt
gtgcaaccccggaaaaaacgcctcaaatgggaagagcaccatttttttaagtaa
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