Pituophis catenifer annectens (San Diego gophersnake): 139319334
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Entry
139319334 CDS
T11059
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139319334 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139319334 (ARID2)
03021 Transcription machinery [BR:
pcae03021
]
139319334 (ARID2)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139319334 (ARID2)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Helix-turn-helix
ARID
139319334 (ARID2)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139319334 (ARID2)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
139319334 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
DUF5532
Motif
Other DBs
NCBI-GeneID:
139319334
NCBI-ProteinID:
XP_070803253
LinkDB
All DBs
Position
Unknown
AA seq
1835 aa
AA seq
DB search
MANSAGKNQPDHRRKGLAFLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGF
GKVSEKNQWGEIVEAFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVQPGNPKP
QLPIGAIPCSYNYQQHSVSDFLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSQDTVSEDWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSSHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
NCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVISALE
VLYMLTEMGEVACSKIAKVDKSIDTLVCLVSMDIQMFGGDALNAVKLVEHQSTNHQVLSE
IRPHAVEQVSSQGHAPATPAPRAPQHVAPPPGIVEIDSEKFACQWLNAHFEVNSDCSVSR
AEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHSVKKVEDANNNGQAHIHVVGVKRR
AIPLPVQMYYQQQSSSTPILRVDSVPEVAPSASPAGLPHGSSSVGNHFLRNPINNQSSTI
AATQMSFPIQGASTMVQTVSRIPQNPLVHSHHQQNAPMTVIQNKAPISCDVVKATVIQNT
VPQSAVPVTIAVGGGAQSSNQNPSNAGPQPSVTVVSSQTLLHQPVIQQSSLHAVVPGQIS
SGTPVTVIQQAVPQGHIFGRVQNIPACTSTVSQAQQLITTSSQPVQTSTHQSTGGNQQQD
AVIIAPQQYVTTSTSNIVSATTVQNFQVATGQVVTIAGVQNPPSRVGFQNIAPKPSQQVP
AAVAQQPMQQSQQQPPPPQQSVVIVSQPTQQGPTYAPAIHQIVLTNPASIPAGQTVQLGA
QPNLTPTSSPSPGPISNNQVPTVISSPSLTSQSQGPPPTVSQMLSVKRQQQQQQHSPASS
QTQLQVQQQVQMQVQPQQNSPGVGQPPANESSLIKQLLLPKRGPSTPGGKLILPAPQIPP
SNSARAPSPQVVYQMANNQATSFGVQGQSSAQSLLVGQQNVQLVQSAIQSQGTVQTVPIS
NLQILPGQLISNSPATIFQGTSGNQVTITVVPNTSFATANTSQGNATQIIAPAGIAMSGT
QAAVGLQVKALPPNQAPLAGQPCSATAPPFKGDKIICQKEEEAKEATGLHIHERKIEVME
NPSCRRGASNTSNGDVKENETQVGSLLNGRKHDSNLPPANSGKTQNETNQFSQVSNGSSL
VMDENGALGKQNFEQPDTQELKSDLRKPLLNGICDFEKGDGSHLSKNIPNHKTSNHIGNG
EISPIEQDNLDATQLDAAKGDQGERFSNGPVLALGTVPVVSSTQEVSKLLTQQPSSTNPD
VPNGPLISSLNSDVPHQRPSVVVSPQTTASVIQGHQMIAVPHSGLRGSPAILSSEVRSTN
GTAECKTVKRPAEDNDRETVPGIPNKVGVRIVTISDPNKAGCSATMVAVPAGADPSTVAK
VAIESAVQQKQQQQQQQQQHATPYIQNMVTQSTSVIPVPTMQVQGPPVSLPPSIYTVSSP
HGEQMKKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSRDALLAGLKQDEHGQVGSSKPSTKPPTAGGSSSTPRAQKAIVNHPSAA
LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENHLSVL
AISNMEASSTLAKCLYELNFTVQSKEQGKDLSVLQ
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcggccggaaaaaaccaaccagaccatcggagaaaaggactcgcttttctg
gacgagctgcggcagtttcaccacagcagagggtctccttttaagaagatccctgtggtg
ggtggaaaggagctggatcttcacgctctctacaccagagtcaccactttaggcggattt
gggaaggtatctgagaagaatcagtggggagaaatagtggaagcatttaactttcccaga
agttgttctaacgctgccttcgctttaaaacagtattacttgcgttatctggaaaaatac
gagaaagtacatcattttggagaggatgatgatgaggtacaaccaggcaatccaaagcca
caactacctataggtgcaattccatgttcctataattaccagcagcacagtgtatcagat
tttcttcgacaaagttatgggctatctatggactttaattcgccaaatgattataataaa
ttggtgctttctctattatctggactcccaaatgaagtggactttgctattaatgtgtgc
actcttctgtcaaatgaaagcaaacatgttatgcagcttgaaaaggaccccaaaatcatc
actttattacttgctaatgctggggtatttgatgacactttaggttcattttctactgtg
tttggtgaagaatggaaggagaaaacggacagagattttgttaagttttggaaggatatt
gttgacgataacgaagtacgtgaccttatttctgacagaaacaaatctcaagatactgta
tcagaagactggatatgggagtctttatttcatccaccacgcaagttgggcattaatgat
attgaaggacagcgagttctccagattgcagtgattttaagaaatctctcctttgaggag
ggaaatgtaaaattattggcagctaatcgtacttgtcttcggtttttgttgctctcttct
catagtcattttatttctttaagacaattggggcttgacactttaggaaatattgctgct
gagcttctcttggaccctgttgattttaaaacaactcatctaatgtttcatactgttact
aactgcttaatgtcaagagatagattcttaaaaatgcggggcatggaaattttgggtaat
ctttgtaaagctgaagacaatggtgtcttaatttgtgaatatgtagatcaagaatcttac
aaagaaatcatctgtcatctcacattacctgacgttttacttgttatatctgctctggaa
gtgctctatatgctcactgaaatgggtgaagtggcctgtagcaaaatagctaaagttgat
aaaagtatagatacattagtatgtctggtttcaatggacatccagatgtttggaggtgat
gcactcaatgcagtaaaacttgttgaacatcaaagtaccaaccaccaagtactctctgaa
attaggccacacgcagtggaacaagtttcatcacagggacatgcccctgctactccagca
ccaagagcaccacaacatgttgctccaccaccaggaatagtagaaattgacagtgaaaaa
tttgcatgccaatggttaaatgcccattttgaggttaattcagactgctcagtctcccga
gctgaaatgtactctgaatatctctctacatgcagtaaactagctagaggtggaatttta
acttctactggattttataaatgtcttcgaactgtatttccaaatcattcagtgaagaaa
gttgaggatgcaaataacaatgggcaggctcatattcatgtagtaggagtaaaaaggagg
gctataccacttcctgttcagatgtactatcagcagcaatcttcttcaacccctattctt
cgggttgattctgttcctgaagtagctccatctgcttcaccagcaggactcccacatgga
tcatcaagtgtaggaaaccattttctgaggaatcctattaataatcaatcttcaactata
gctgcaacacagatgtcttttccaattcaaggtgcatctacaatggtacagactgtttcc
aggataccacaaaaccctttagttcatagtcaccatcaacagaatgctcctatgactgtc
atacagaataaagctccaatttcttgtgatgtagtgaaggccacagtgatacagaacaca
gttccgcagtctgccgttcctgttactattgctgtaggaggtggagcacaatcttcaaat
caaaatcctagtaatgcaggaccacaaccctctgttactgttgtcagctcccagacttta
cttcatcaacctgtaattcaacagtcatctctacatgcagtggtaccaggacaaatatcc
tcaggcactcctgttacagtaatacaacaagctgtacctcaaggtcatatatttggcaga
gtacagaacataccagcatgcacttcaacagtttcccaggctcagcagcttataaccaca
tcatcacaaccagtacaaacatcaactcatcaatccacaggtggtaaccagcagcaagat
gctgttattatagcacctcagcagtatgttacaacatcaacatctaatatagtttctgct
actacagttcagaatttccaagttgcaactgggcaggtggttacaattgctggtgtccag
aatccaccatcaagagtagggtttcagaatattgcaccaaaaccttctcagcaagtccca
gcagcagtggcacagcaaccaatgcagcagtctcagcagcaaccaccaccacctcagcaa
agtgtagtgattgtaagccaaccaactcagcaaggtccaacatacgcaccagccattcac
caaattgttcttactaatccagcttcaatcccagctggccaaactgttcagttgggtgca
cagccaaacttaactccaacttcctcaccatcacctggaccaatttcaaacaaccaagtc
cccacagtcatatcatctccatctctcacctctcagtcacaaggaccccctcctactgtc
agtcagatgctttctgtaaagcgtcaacaacagcagcaacagcattcaccagcatcatcg
cagacgcagctgcaagtccagcagcaagtccagatgcaagttcagccacaacaaaatagt
cctggggtgggtcagccacctgctaatgaatccagtctgataaaacaactcttgcttcct
aaacgaggcccttctactcccggtggcaaacttattctcccagcaccacaaattcctcct
tcaaacagtgcaagagctcccagccctcaagtggtttatcagatggctaataaccaagca
acgagttttggagttcaagggcagtcttctgctcagtcattactagttgggcagcaaaat
gttcagttggtccagagtgcaattcaatcccaaggtacagtacaaactgttcctatttcc
aatttacaaatattgccaggccagttgatttcaaacagcccagcaactatttttcaaggg
acttctggcaatcaggttactataacagttgtgccaaatactagtttcgctacagcaaat
acaagtcagggaaatgcaactcaaataattgctccagctggaatagcaatgagtgggaca
caagcagcagttgggcttcaggtgaaagcacttccacctaaccaggcacctctagctgga
cagccatgttctgctactgctcctccattcaaaggagataaaataatttgccaaaaggaa
gaagaagcaaaggaggcaacaggtttacatattcatgagcgcaaaattgaagtaatggaa
aacccttcttgcagaagaggagcttcaaacaccagcaatggcgatgtaaaggaaaatgaa
acacaagtgggaagtcttctaaatggaagaaagcatgactccaatctacctccagctaac
tcagggaaaactcagaatgagaccaatcagttctcacaagtcagtaatggatcatcatta
gtcatggatgaaaatggagctcttggaaaacagaactttgaacaaccagacacacaggaa
cttaaaagtgatttgaggaagcccctccttaatggaatctgtgactttgaaaagggcgac
ggttcccatttaagtaaaaacattccaaatcacaaaacttccaaccatataggaaatggt
gaaatttctccaatagaacaagataatttggatgccacacaactagatgctgccaaaggt
gatcaaggggaaagattttccaatggacctgttttagctttggggacggtgcctgttgta
agcagtacacaagaagtttcaaaactcttaacccagcaacctagtagtaccaaccctgat
gtacctaatggacctctaatttcaagtttgaattcagatgtgcctcaccaacgcccaagt
gtagtagtctcaccacagacaacagcctctgttatacaggggcatcagatgatagcagtt
ccacactcaggacttcgtggatccccagctattctgtcatctgaagtacggtcaactaat
ggcacggcagaatgcaaaactgtaaagaggccagcagaggataatgacagggaaactgtt
ccaggaatccccaataaagtaggagttagaattgttacaataagtgaccctaacaaagct
ggctgtagtgcaactatggtagctgtgccagctggagccgatccaagtactgtagcaaaa
gtagcaatagaaagtgctgttcagcaaaagcaacaacagcaacaacaacagcaacagcat
gcaacaccatacatacaaaacatggtcacacagagcacatccgtaataccggtaccaaca
atgcaagttcaaggtccacctgtcagtttgccaccttctatatatactgtatcaagtcca
catggagaacaaatgaaaaaacctggtcaaaatttcatgtgtctttggcaatcctgtaaa
aagtggtttcagacaccatcccaagttttctaccatgctgcaactgagcatggaggaaaa
gatgtctatcctggacagtgtttgtgggagggctgtgaacctttccagagacaaaggttt
tccttcattacccacctacaggataagcattgctcacgagatgctctccttgcgggatta
aagcaagatgaacatggacaagtaggaagttcaaaaccttccacaaagccaccaactgct
gggggttcttcttctactcccagagcacagaaggctattgtcaatcaccctagtgctgcc
ctcatggctttaaggcgaggatcacgaaaccttgttttcagagatttcacagatgaaaaa
gagggaccaattactaaacacatccgattaacagctgccttaatattaaaaaatattggt
aaatattcagaatgtggtcgcaggttgctaaagagacatgaaaaccatctatcagtgctt
gccatcagtaatatggaagcttcctccacccttgccaaatgcctttatgaacttaatttt
acagttcagagtaaagaacaaggcaaagacttgagtgttctgcagtaa
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integrated database retrieval system
