Pituophis catenifer annectens (San Diego gophersnake): 139319386
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Entry
139319386 CDS
T11059
Symbol
RPAP3
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139319386 (RPAP3)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139319386 (RPAP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
RPAP3_C
TPR_8
TPR_11
TPR_16
TPR_BSK1_C
TPR_9
TPR_19
TPR_12
TPR_17
ARM_TT21_C
NOMO_8th
ARM_CUL7_CUL9
Motif
Other DBs
NCBI-GeneID:
139319386
NCBI-ProteinID:
XP_070803327
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MSSPNKAIELQLQIRQNAEELQDFVKDLESWEKDIKEKDHDLRHQSGTAEKDLPPIRNEA
YKKKKSKVKTDSKQTSEENKKNKIKSYDYEAWAKLDVDKILEEFDKEDTTHDSVSDSEED
GIHIDTEKALAEKEKGNTYFKQRNYDAAIECYTKGMNADPYNPALPTNRASAFFRLKKFS
VAESDCNLALALNKNYTKAYSRRGAARFVLQNFKGAKEDYEKVLELDPNNFEAKNELRKI
EQALLSKVNCQAEETDTFRKVEITEDELKQLEEEQLKQKAMAEKDLGNRYFKEGKYEIAI
ECYTRGIAADGTNALLPANRAMAYLKVQKYEEAEEDCTRAVLFDSSYSKAFARRGTARAA
LGKLKEAMQDFKSVLKLEPGNKQAMNEITKLKNELIAKGFLSDTEYFGLLQNESEIQNLV
KPIDKPLHLRSAKPLRRINIEEINNDVLNANLMLTRESEPIQSVFDNPNEIQELISIKNQ
NEDFSSPSGTPKAKLLKIEEIGDALLTKSVITNAVKEKPSLQPSVIKKQAKTKNYIISSV
SEFSVPPVPVNSFQLESDFRKLKSYPDQLYRYLKQIDPSLYPNLFQKSLDPEVFCQILKI
LQDFHTKKEEPLLILEILHKLSESKRFDMAVMFMSESEKKTVRCLFDHLEQSHLEDSPIK
QLKIKYSI
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaccaaataaagcaattgagttacagttgcaaatccgacaaaatgctgaagaa
cttcaagattttgtgaaagatttggaatcatgggagaaggatattaaagaaaaagatcat
gatctaaggcatcagagtggcactgccgaaaaagatttacccccaattcggaatgaagct
tacaaaaaaaagaagagcaaagttaaaacagactcaaaacaaacaagtgaggaaaacaaa
aagaacaagataaaatcttatgattatgaggcttgggcaaagctggatgtggataagata
cttgaagaatttgataaggaagataccactcatgattcagtgtcagattctgaggaagat
ggaattcacattgatacagaaaaagctcttgctgagaaagaaaagggcaatacttacttt
aaacaaagaaactatgatgctgcaatagaatgctatacaaaaggaatgaatgcagatcct
tacaatccagctttgcctacaaatagggcatctgccttttttcggctaaagaagttttct
gtggctgaatctgattgcaatttagcccttgccttaaacaaaaattacacaaaggcttat
agcagaagaggggcagctcgttttgtcttgcaaaattttaagggtgccaaagaagattat
gaaaaggttttggaattggacccaaacaactttgaagcgaagaatgaacttaggaaaatt
gagcaggctctcttgtcaaaagtaaactgtcaggctgaagaaacagatacttttaggaaa
gtggaaattacagaagatgaactgaaacaattggaggaggagcagttaaagcaaaaggct
atggcagaaaaagatttgggcaacagatatttcaaagaaggtaaatatgaaatagcaata
gaatgttacacacgtggaatagcagcagatggcaccaatgcacttcttccagcaaataga
gctatggcctatctaaaagttcaaaaatatgaagaagcagaggaagattgcactcgagct
gtgttatttgattcttcatattctaaagcctttgccagaagaggcacagctagagctgct
cttggaaaactaaaagaagctatgcaagatttcaaaagtgtcctgaagctggaacctgga
aataagcaagcaatgaatgaaataacaaagcttaaaaatgagttaatcgcaaaaggtttt
ttgtcagacactgaatattttggactactacagaatgaatcagaaatacaaaatctggta
aaacccattgataaacccttgcatctgagatcagctaaacctttaagaagaataaacatt
gaggaaatcaataatgatgtgctaaatgcaaatttgatgctcaccagagaatctgagcct
attcaatctgtttttgataacccaaatgaaatacaggaattaatatctattaagaatcaa
aatgaagatttctcttctccatctgggactcccaaagcaaagctgctgaaaatagaagaa
attggtgatgctttgttgaccaaatctgttatcacaaatgctgtgaaagaaaaaccgtca
cttcagcctagtgttataaaaaaacaagctaagacaaaaaactacattatttcttctgtg
tctgaattttccgtgcctccagtccctgtgaattctttccaacttgaatcagatttccga
aaattaaaaagttatcctgatcaattgtatagatatttgaagcaaattgatccttccctt
tatcctaacctcttccaaaaatcattggatccagaggttttttgccaaatcttgaaaatt
ctacaagattttcatactaagaaagaagagcctttacttatccttgaaattctgcacaaa
ttatcagaatccaaaagatttgatatggcagttatgtttatgtcagaatcagagaaaaaa
actgtacgttgtttatttgatcatttggaacaatctcatttggaagattctcctattaag
caactcaagataaaatatagcatttaa
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