Pituophis catenifer annectens (San Diego gophersnake): 139319656
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Entry
139319656 CDS
T11059
Name
(RefSeq) F-box DNA helicase 1-like
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139319656
Enzymes [BR:
pcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139319656
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139319656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
Viral_helicase1
AAA_19
Retrotrans_gag
AAA_12
AAA_30
AAA_7
ABC_tran
ResIII
AAA_16
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
139319656
NCBI-ProteinID:
XP_070803704
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MHCGPAVFKMAKVLAAPAELRTMTWTSLQRILKAHYAPQSSSLVRRQEFYRRDQREGETI
SEFVAILREIAAACDFVSLEEAMRDRLVLGLRDLTLQSRLLARPQITFKEALKEASAMEA
SQKSTATMKKVNKGPQGKRESSVHYEEAEMESEEEEDEDEVHHVGPPSSPQKSRSFQASG
KRRRSRKSEDSDERDTVVPRKHVCLPLEPSSSNGSAGQEVQEPLLVRLPVESSSDGTVQQ
EVQDVEVDPLSDAQPELSGTTSGDDVSQLIPWKTLYNQYLEKDDHALLIIGAILKRYGLT
KEHRQCMLGFIQCVAAVRTCHCKDPTAALTCLQHHSLYPKAKVCIARKLPDLDGRKETPA
YIRAVMAAIVLFAGGFCDIQELANCLQSPSSSMSLTDTLEILYSAATLLYAMWENEVRIS
IRLHYSVSYCLYHLENSPGSTPSINDPELPSSGGGFRPISQPTNEQQLILDHRLNPGDRV
KIVGSAGTGKSSTLLQYARKWPKLKFLYIVFNKIIKDQLSLFCPENVTCHTFHSLAYDEV
GKQYEDELIPDILTNEVDHVLSNPEVSAKEVVQTLKAFFASAHEFLTVEHTVCGKYVTAW
KKQIIVEEAEQIWAKMKVQDPTKEKAYYMTHDGYLKLWQLQKPSLSKYNVIMVDEAQDYT
PAMMNIVLLQKCAVILVENPHQQIYIFQGADNTVLDVPNSRIFHLTQSLRFGYEIGYICA
ILDYYRKIRKPTVGNNQDSDVSVEGKVAWLSETNGEVFHKAVNIIYGSSPRIHFVGGIET
VGLDIIEDLYNVLHPEQNYELKSTLINKYVAKGLKSIKDFEATGDKQLTLATGILNDYDE
RVPHLVRRMRQYHVPDPESADYILGTVEEAKGLEFDTVKIDNVLLNSHHYRTWYLDRTDE
WNLLYVAVTRAKRRLILPTHFTDFLNKQTKESGLSVRFELSTTLSNTTPPDCVHCGVPIP
ADPVLILKRINHPFGVDNTERKGFLCSSCARSFGPIAQLTGSSRAQGPARLPETIEVPSE
VHILLEDF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcggtccagctgtattcaaaatggcaaaagtgctcgccgcccctgctgagctg
agaaccatgacttggacgtccctgcaacgcatcctgaaggcgcattacgccccccaatca
tcgtccctggtgagaaggcaagaattctaccggagggaccagagggagggtgagacgatc
agtgagttcgtggcaattttaagagagatagccgctgcgtgcgactttgtgagcctagag
gaagccatgagggatcggctagtgttgggactaagggacctcaccctacaaagcaggttg
ctggccaggccccaaataactttcaaggaggccctgaaagaagcctcagcgatggaggca
tcccagaaatccacggcaaccatgaagaaggtcaacaaggggccgcaagggaaaagggaa
tcctcggtccattacgaggaagcagaaatggaatcggaagaagaggaggatgaggatgaa
gtgcaccacgtcggaccacccagttcgccgcaaaagagccgatcgttccaggcaagcggg
aaaagaagaagaagtcgtaaaagcgaggattctgatgaaagagacacagtggtgcccagg
aaacacgtttgtttgcccttggaacctagcagctccaatggaagcgctggccaagaggtc
caagaaccattgttggtgaggcttcctgtagagagctcaagcgatggaactgtccagcag
gaagttcaagatgttgaggtggatcctctttctgatgcccagcctgagctctccggaact
acatctggggatgacgtatctcagttaattccttggaagacgctgtacaatcagtatttg
gaaaaagatgaccacgccttactgatcataggagccattctgaaacggtatggcctaacc
aaggagcaccgccaatgcatgctgggatttattcagtgtgtggctgctgttcggacctgc
cactgtaaagatcccaccgctgccctcacatgtctgcaacaccactcactctatcccaag
gcgaaagtctgcatcgccaggaaacttccggatttggacggtcgcaaagagactccggcc
tatattcgggcagtgatggcggccattgtgctctttgctggaggcttttgcgacattcag
gagctggcgaactgtctccaaagtcccagctcatccatgtcgctgacggacacccttgag
atcttgtattccgcggccaccctactttatgccatgtgggagaatgaggtcaggatcagt
atcaggcttcactacagtgtttcttattgcttgtatcacttggagaattcacccggcagc
acgccttccataaatgatcctgaattacccagcagtggaggaggttttaggcctatttca
caacctactaatgaacaacaactgatcttagaccacaggcttaaccctggagaccgggta
aaaattgtgggttctgcaggcactgggaaatcatccactctgctccagtatgccaggaag
tggcccaagcttaaattcttgtacatagtgttcaacaaaatcatcaaggaccagttatcg
ctgttttgccctgaaaatgtcacctgtcataccttccattccttagcttatgacgaagtc
ggcaaacaatatgaggatgaacttattccggacatactgaccaatgaggtagaccatgtc
ctctccaatcctgaggtcagtgccaaggaggttgttcagaccctcaaagccttttttgct
tcggcacatgagttcttaactgtggagcacaccgtctgtggaaaatatgtgacggcatgg
aaaaagcaaatcattgttgaagaagcggaacaaatatgggccaagatgaaagtgcaggac
ccaaccaaggagaaggcgtactacatgacgcatgacggttacttgaaactttggcaactt
caaaagccttctctttccaaatacaacgtcatcatggtggatgaggcccaagactacacc
cccgctatgatgaatattgtcctcttgcaaaaatgtgcggtgatcttggtagaaaatcca
caccaacagatttacatcttccaaggtgctgacaacacagttttggatgtgcccaacagc
cgcatcttccacctgacgcagagtttgcggtttggctacgaaataggttacatttgtgca
atcctggattattacagaaaaatccggaaacccacggtgggaaataaccaggacagtgat
gtcagcgtggaggggaaggtggcttggttatccgagaccaacggagaagtctttcataaa
gctgtgaacattatatatggatcctcacctaggatacacttcgtggggggtattgaaact
gttggactggatataattgaagatctctataatgtcctgcatcctgaacagaattacgag
ctcaagagtaccctcatcaacaagtatgtagcgaagggcttgaagagcatcaaggatttt
gaagcaacaggagacaaacagctgacactagcaacaggaattttgaacgattacgacgaa
cgtgttccgcacctagtgagaaggatgcgacagtaccatgtcccggatcctgaaagtgca
gattacatcctagggactgtggaagaggccaaagggctggaatttgacaccgtcaaaatt
gataatgtattactgaacagtcaccattatcggacgtggtatctggaccgaactgatgag
tggaatttgctgtacgtcgctgtcactcgagccaagaggcgtctcatcctgccaacgcat
tttactgacttcctaaacaaacagaccaaggagtccggtttgtctgtccggtttgaatta
tctaccacactctccaatacgacaccaccggactgtgtacactgcggagtgcccatccca
gcggatcctgtgctaatcctgaaaaggataaatcatccttttggagtggacaacaccgaa
agaaagggatttttgtgttcttcttgtgcgcgcagttttggccccattgcacagctcaca
ggatcttccagggcgcagggcccagcccgtctcccagaaaccattgaggttccctccgag
gtccacatcctccttgaagatttttaa
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integrated database retrieval system
