Pituophis catenifer annectens (San Diego gophersnake): 139319718
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Entry
139319718 CDS
T11059
Symbol
CALD1
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139319718 (CALD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcae04812
]
139319718 (CALD1)
Cytoskeleton proteins [BR:
pcae04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
139319718 (CALD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
139319718
NCBI-ProteinID:
XP_070803796
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLETERLSYQRNDDDEEEAARERRRRARQERLRQREEDDLGI
VKPETNAQNNIAEGESKTTTTVTTVMTTQGDGDDDAVFLERMARREERRQKRLQEALERQ
KELDPTITDETVSFTSKKVVNNVEENETPGKEEKVETHRRRYEMEETETITKSYQRNNLE
QDEEDGKKDEEDKEEVEDQKPKPQALEENQVELTVEKENIDNEEESAVLEGKHLEVNAEE
DKLDNDTYVLASSKENLSITVVIQNKEEDNEAEMNQIQIEARERLEREERERAEAEEQRR
AEEEKERLEAEKREAEEKAKREAEEKAKREAEEKTRLEAEERERVKAEEQRKAEEERKRK
EKEEAEKKKAAQEKERREAEERERRKAAEEKKAAEERERAKEKEKREADERAKAEAKAKL
EEEKLKAKQKAEEKKVDQPKGKKGDEKKIEEKQVKEKKLQEEKITAASLRKQGEENKVEA
KKGNLQDKKLQPAFRKEEMKDNKLNRDKMPKEEAKSIWDRKKGIPDSKPQNGECIQELPA
HKLKHTEHAFGRPGFKTTPGSEDSKPQVEAGKRVEELRRRRGENESEEFEKLKQKQQEAA
VELEELKKKREERRKILEDEEQRRKKEEAERKVREEEEKRRLKEEIEKRRAEAAEKRQKM
PDEAQGDDKKPFKCFTPKGSAFKIEERAEFLNKSIQKSGMKPTHTTPIVSKIDSRLEQYT
SAIEGNKAAKATKPAASDLPVPAEGVRNIKSMWEKGNVFASPSGTGTPNKETAGLKVGVS
SRINEWLTKTPESNKLAASKPSDLRPGDVSGKRNLWEKQSVEKTPSSSKVTAAGRKLETN
AGLRQFEKEP
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttcgaacgtcgcagagaacttaggagacaaaaacgggaggaaatgcgcctg
gaaacagagagattatcctatcaaagaaatgatgatgatgaggaagaagctgcccgagag
cgacgcagacgagcccgtcaagaaagactgcggcaaagagaagaggacgacttaggaatt
gtgaaacctgaaacgaatgcccaaaataacattgcagaaggagagtccaaaactactact
acagtgaccactgttatgactactcaaggtgatggagacgatgatgctgtgttcctggag
aggatggcacggagagaggaaagacgtcaaaagcgtcttcaagaagcattggaacgccaa
aaggaacttgacccgaccattaccgatgagacggtgtccttcacaagcaaaaaagtggtg
aataatgtggaggaaaacgagaccccgggaaaagaagaaaaggtagaaacccacagaaga
cgctatgagatggaggaaacagaaaccatcactaaatcataccagaggaacaacctggag
caggatgaggaagatggaaagaaagatgaggaagacaaagaagaggtggaagaccagaaa
ccaaagccacaagccctagaggagaatcaggtagaactaactgtagagaaggagaatata
gacaatgaggaggaatctgcagtcttggagggaaagcatcttgaggtaaatgcagaggag
gacaaattagacaatgacacctatgtccttgccagttcaaaggagaacctcagcatcaca
gtagtcatacaaaataaggaggaagacaatgaggcagaaatgaaccagatacaaattgag
gcgagggaaaggcttgagagggaggaaagggagagagccgaagctgaggaacagaggaga
gcagaggaagaaaaagagagattggaagctgagaaaagagaagctgaggagaaagcgaag
agggaagctgaggagaaagcaaaaagggaagctgaggagaaaacaaggcttgaggcagaa
gagcgggagagggtgaaggcagaagaacagcggaaggctgaggaggaaagaaagaggaag
gagaaggaagaggcagagaagaaaaaggctgcccaggagaaagagaggcgtgaggctgag
gagagggagaggaggaaggcagccgaagagaaaaaagcagccgaggaacgggagagggct
aaggagaaggaaaagagggaggcagatgagagggccaaagctgaggctaaggctaagcta
gaagaggagaagttaaaggccaagcaaaaggctgaggagaaaaaggtagatcagccaaaa
ggcaagaaaggggacgaaaagaaaatagaagagaagcaggtaaaagagaagaaactccaa
gaggagaaaatcacagcagcttccctcaggaaacagggggaagaaaataaagtggaagct
aaaaaaggaaacctacaggacaagaagcttcagccagccttcaggaaagaggagatgaaa
gataacaaactgaacagagacaaaatgcccaaagaagaggcaaagtccatctgggatcgc
aagaagggaattccagattccaagccacaaaacggggaatgcatccaagaactccctgct
cacaagctgaagcacacagagcatgcttttggacgaccagggttcaaaaccacaccggga
tccgaagacagcaaaccccaggtggaagctggcaagagggtggaggagttgcgccgtcgg
cggggtgaaaacgagagcgaagaatttgagaagctgaagcagaagcaacaagaggcggcg
gtggaactggaggagctgaagaagaagcgtgaagaacggaggaagatcctggaagatgaa
gaacagagaaggaagaaagaagaggcggagaggaaagttcgggaagaggaggagaagagg
cggctgaaggaagaaattgagaaaagaagggcagaagccgctgagaaacgccagaagatg
ccagatgaagcacaaggtgatgacaagaagcccttcaagtgtttcactccaaaaggttct
gctttcaagatagaagaacgtgcagagttcttgaacaaatccatccagaagagtggtatg
aaacctactcacacaactccaattgtctccaagatagacagtaggctggaacaatatacc
agcgcaattgagggcaacaaagctgcaaaggccaccaagccagctgcttctgacctcccg
gttcctgctgagggagttcgtaacatcaagagcatgtgggagaaaggcaacgtgtttgca
tcaccctctggaacggggacacccaataaggaaacagctgggctgaaggtcggcgtctcc
agtcgcatcaatgaatggttaaccaagaccccagaaagcaacaaattggctgcttcaaaa
ccatcggacttacgacctggagatgtatctggcaaacgcaacctttgggaaaagcagtcg
gttgaaaagaccccttcttcatcaaaggttacagcagcaggaaggaaattggagaccaat
gcaggtttgagacaatttgaaaaggagccttaa
DBGET
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