Pituophis catenifer annectens (San Diego gophersnake): 139319886
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Entry
139319886 CDS
T11059
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcae03009
]
139319886 (UTP20)
Ribosome biogenesis [BR:
pcae03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
139319886 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Arm
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
139319886
NCBI-ProteinID:
XP_070804037
LinkDB
All DBs
Position
Unknown
AA seq
2777 aa
AA seq
DB search
MKTKSSAHKTENTHRFLTFSERLSNVNIDIIHRIDRTGSYAEEVDTYFHEGLEKWRELNL
TWHFVTFYRQVVNKCQSFNQIVYYQNNIVKSLKTHLQVKNSLAFQPLLDLVVQLARDLQT
DFYPHFQDFFLCITSLLETQDTELLEWAFTSLSYLYKYLWRLMVKDMTNIYRLYSTLLAH
RKQHIRNFAAESFTFLMRKVSDKNALLNLMFLDLGEHPEKVEGVGQLIFEMCKGVRNMFH
SCAEKAILLILKKMGPVTETEVILPWVSIGEVCKHMAQSAARFIYREHFDIFFKCLQESV
FTLQEKVTKDNCCEASEQMERLLQVYLIIVEYAYGSKISQPEEVCTTLTKIIDTSDLTVP
CCNSLLKVISVLLLHENVLLSDSLVKEIVEKVFRGGFEWYSVLNFSKAMFLMKQFEKQFL
PSLLEYIEHCIYSDDAVIQQVALAVLSRLILKKAEPPSVGSMAYEKYPLVFAESAKGRYL
RSKKMGEKEEKTVLDHILSCIRSPTSRNTADISQSWAALVVLPHIRPLVKEKITPVFTRF
SESLFAGLDKGEFCKGNLFVACQAVSTLLSLVESLEILDMLPVERVKTLLMTFPSEPSAL
LLADLYFTRLALCGYHEHLSKETLMELFSKLQFNISSSVPKVRLLTIRILSRFDDLLSTG
TQDVGLFGMLLQAELVPANINDYREKLLYLSKLRHDLVCSMIPEGALQEVPLRYLLGMLY
INFSPLWEPVIELIRSHADEMENKLFWKVYYEHLEKAVSYAEKELRNELEEEPKTVTDVG
SEEIYQHHVRAVYDEQLKCQTCCYERMDHTNFRFLLWKAMSRFAYRVESRSRELSPLLLR
FINNEYYPADSQIAPVQDLRKKSSCSEDVKDLPEKMDLQDTTEDESHDFEEEKQTSEGQM
TEEMPKKKTRRAATKQLISHLQVFTQFSNPRALYLEPKLNEIYVQLLTHQDQNVQKVALD
CIMTYKHPHLLPYKENLYRLLEDKSFKEEIVHFSISEENSIVKPEHRPELIPVLMRILYG
RMKNKTGSKTQGKSSAGTRMAIVLRFLAGSLSEEIRVFLDLLFEPVRRFNNGQCHSAVLQ
AVRDLDLSQVLPLGRQHSLFNSLEVVLKNLGHLISQNLPEILQILLCMTATVSHILQQRE
KIQLRFINQLKNLRRLGLKLIADFFSDFEMYSFSGEEIDAVFCAVVWPQITRLASESQYS
PTPLLKIIHIWSKNPRYFILLAKQKPGHPEYDILSNVSAVLSAKALGEGTASTVMDVIDN
LLNIPDFEPNDLFSSLTVTDCIFIEVEEIAGDVPSMGTRLVLPHVPSILQYLNKTMISVD
RIKKKKYNAQLSKELNILSKISKFIKDKNQSSILIGLLLPFVQQTNITQDTEIDILETVQ
NLLKHCLTPASFLKPLAKLFSVIQNKLSRQALCGVFETLSHLESNIKYITETVKLNAFSP
HHLDEINFDVRLSAFQDIISHIKGMNKIDVNYLIPVMHNCFYTIQLEEMALSDNAVLCLT
AIIQRFSELEHTEDEFKEIIQHTLLDSLRKGLKSKIECIQQDYTSLLSNLIRAFSEHPEF
HDLVQLTDYHDPEMDFFENMKHIQIHRRARALMKLAKQLVEGKTILSSKTLQNYIMPYAT
TTIFNEKMLKYENMVTASVEMVGAVCRHLSWSAYLYHLKHFIHVLQTGQINQKLGVSVLV
MVLEAFHFDHETLEKQLSIIEKEENETMEVELSDGEEEGQKTSEEQSCVNEQKEYAESRS
DQPANEEVENFQKVTKPPSFLPRNKEELECLIKHIQETVTRNILPKLHRCLIAKVKRDEQ
HKMVKSKIVNDEEVVQVPIAFAMVKLMQSLPQDAMEENLPGILLKVCSLLRNRAQEIRDV
ARNTLMKIIEALGPQYLQYVLKEMVSILVTGYQVHVLTFTVHLLLKSLANERLKVGDLDP
CIELLMEIFHRELFGEIAEEKEVKGIVSKVMEARRSKSYDSYEILAKYVGKNQVIKLILP
LKEVLENTTSLKLSRKVHETLRRIVSGLIVNKAMTAETVLLLSHGLISENLPLLTEKAKM
KAAVPPDPRLQPESCLLLPPTPIRGSQKAPVSSKTNMHVLVESGLRLLHMSLKRSKINSS
DERVLEMMDPFVQLLISCLQSTDIKVITGALQSFLWVLKFPLPAIDNNVEQLTTQLFLLL
KDFAKQGTVKGQNFHLVVNCFKCVSLLVRNTKSQITDKQLQILLGYAEEDIYDSLRQTTA
FGLLKAILSRKLIVPEIEGVMQKVADFAVTGQSEQVRIQCRQIYLKYIIDYPLGKKLKPN
LECILAQLNYEYETGRESALEMIAYLFETFPQGLLHEFCGLFFVPLCMMIVNDDSAKCKR
MAALAIKNLLSKISSANRDLMFSLVASWFTSKKSVQKRLAAQACGAFVEAEKIEFEKRLG
TILPVIEREIHPSNFEEVKEETDEKLADRLLFSFLTLLVKLINECNIIQLNKHHEILINI
WGHVQSHLWYPHSWVWLTSAQIFGLLFASHKPEELVNKWSKRKTEKKQVTHEPSATIFLI
EELSEKMKTLALAFCHQLKSKFLSDSLGEQVIKNLLFVSKVLYLLAPTPEDGKEIGEDVV
WETEDQGDLGSEDEKEVSGMEAKEKSSPASLLWVMKKVLVMATREAAHSPKDSLKRTCIF
KFLGAIAVDLGKEKVKPYLPTIIAPLYRELSSTYAEQDPTLKNLSQEIIELLKKLVGLED
FSISFAFVQKQASQRRAKRKKQRALQAVANPEIAAKRKLKRHKNKIEAKKRKIEFLRPGY
KAKKQRSHALKDLAMVE
NT seq
8334 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaaatcgtcagctcataagactgagaacacgcatcggttcctcactttttca
gaacgtttaagcaatgtaaacattgacattatacatcgcattgatagaacaggaagctat
gctgaggaggttgatacctattttcatgaaggacttgagaaatggagagagctgaatctg
acatggcattttgtgacattctacagacaggtagtcaacaaatgccagtctttcaatcaa
atagtatattatcagaataatattgtaaaaagcttgaaaacccacctgcaagtgaaaaac
agtcttgcatttcaaccccttttggatttggtggttcagctggcccgtgatcttcagaca
gatttttatccacattttcaagatttttttctctgcattacaagtctgttagaaactcag
gacacagagttgttagaatgggcctttacatcactttcctacctatacaaatacttatgg
aggcttatggtaaaggacatgaccaacatttacagattgtacagtacccttctggctcat
cgcaaacagcacatcagaaactttgcagcagaaagcttcaccttcctgatgaggaaggtt
tctgacaaaaatgcccttttaaaccttatgttccttgacttgggagagcatccagagaaa
gtggaaggtgtgggacaattaatttttgagatgtgcaaaggggttagaaacatgttccat
tcctgtgcagaaaaggccatactgttaattttgaagaagatgggaccagttacagaaaca
gaggttatactcccttgggtttccattggagaagtttgcaaacatatggcacaatcagct
gctagattcatctatagggaacattttgatatctttttcaaatgtttgcaggaatcagtt
tttacgttgcaagaaaaggtaaccaaggacaactgttgtgaagcttctgaacaaatggaa
agattattgcaggtctacttaatcatagtagagtatgcatatggctcaaaaatttcacaa
cctgaagaagtttgtacgactttaacaaaaataatagatacatctgatctcacagtgcct
tgttgtaattccctgcttaaagttatttctgttttgcttcttcatgagaatgtcttattg
tccgattctttggtgaaagaaattgttgaaaaggttttcagaggcggatttgaatggtat
tctgttttgaatttttctaaagcgatgtttctgatgaaacaatttgaaaagcaatttctt
cccagcctccttgaatacattgagcactgcatctacagcgatgatgctgtgatccagcaa
gtagcattagcagttctctctagacttatcctaaagaaagcagaacctccctctgttgga
tcaatggcgtatgagaagtatcctcttgtttttgcagaatcagctaaaggaagatatttg
agaagtaagaagatgggagaaaaagaagagaagactgtgcttgatcatattctgtcttgc
atcagatcccccacaagcagaaacacagctgatatttcacaatcttgggcagcccttgta
gttcttccacatataaggccacttgtgaaagaaaaaattacaccagtgtttacaaggttc
tctgagagtctctttgctggccttgacaaaggagagttctgcaaaggaaacttgtttgtg
gcttgtcaagctgtgagcacgcttcttagtttagtggaatccttggaaattttagatatg
ttgccagtggaacgcgtaaagactttattgatgacatttccctcagaaccatctgcctta
ctgttggctgatctctattttacaagattagcattgtgtggttatcacgaacacttgtct
aaagagactctgatggaattattttctaaattgcaattcaatatttcttccagtgtacct
aaagtgcgactgctaaccatacggattttaagtcgttttgatgacttgctttcaacagga
actcaggatgtggggttatttggtatgttgcttcaagctgaacttgtgccagcaaatatc
aatgattatcgtgagaagctgctttacctgagtaagctgagacatgatttggtgtgctcc
atgatccccgagggagctttgcaggaggtgccgcttcgatatttactgggaatgctttat
atcaactttagtccactgtgggaacctgtgattgagcttataaggtcccatgcagatgaa
atggaaaacaaactattctggaaagtttattatgaacatttggaaaaagctgtatcctat
gctgaaaaagagctacgtaatgagctagaagaagaaccaaaaactgttacggatgttgga
agtgaggaaatctatcagcatcatgtcagagctgtgtatgatgagcaattgaaatgtcag
acatgctgttacgagagaatggatcatacaaactttaggtttctcctttggaaagcaatg
tcaagatttgcatacagggtggaatccaggtcaagagaactttctccacttctactaaga
tttattaacaatgagtattatcctgctgattcacaaatagccccagtgcaagaccttaga
aagaaaagcagttgtagtgaggatgtaaaagatcttccagagaaaatggatcttcaagac
acaactgaggatgagtcacatgactttgaagaagagaagcaaacttctgaaggccaaatg
actgaagagatgccaaaaaagaaaacaagaagggcggcaacaaagcagcttatcagtcac
ttacaagttttcactcagttttcaaatccccgtgctttgtatttagaacccaaattgaat
gaaatatatgttcagctgctgacccaccaagaccaaaatgtacaaaaagtagctcttgat
tgtatcatgacttacaagcatccacatcttctgccctataaagagaatttatatcggcta
ttggaagacaagagttttaaagaagaaatagttcattttagtatttctgaagaaaacagt
atagtaaaaccagagcaccgaccagaacttattcctgttttgatgaggattctgtatgga
cggatgaaaaacaaaactggaagcaaaacacaagggaaatcatcggcagggacccgtatg
gctattgttttgagattcctggcaggctctttgtctgaagagataagggtgtttttggat
ctgctctttgagcctgtgagacgtttcaataatggacagtgccactctgcagtgcttcaa
gctgtgcgagatttggatttatctcaagtcctcccgttaggccgtcagcatagccttttc
aacagcttggaagtagtactaaaaaacctgggacatctaatcagccagaacctgcctgag
attttacagattttactttgcatgacagcaacagtatcacacattcttcagcaaagagaa
aagattcaactcagatttatcaaccagctgaaaaacttaagacgccttggacttaagctt
atagcagactttttctctgactttgaaatgtacagctttagtggagaagagattgatgct
gtgttctgtgcagtggtgtggccccagatcactaggctggcttctgagagccagtattct
cctactcctttactcaaaattattcatatctggagcaaaaaccccaggtatttcattttg
ctagctaagcagaagccagggcatccagaatatgacatattatcaaatgtatctgccgtg
ctctcagccaaggctctgggagagggaacagctagtactgtgatggatgtgattgacaat
cttctcaatattcctgactttgaacctaatgacctgtttagcagcttgacagtgaccgac
tgcatctttattgaagttgaagaaatagcgggagatgttcctagtatggggacaaggcta
gttctcccccacgtcccttcaattcttcagtatctcaacaaaactatgatcagcgtagat
aggataaagaaaaaaaagtataatgcacaactcagcaaagaactcaacattctttcaaag
attagcaagtttataaaggataagaaccagagttctattctgattggcctcctgctccct
ttcgttcaacagaccaacattacgcaggatacagagattgacattctggagacagtacaa
aatctactgaaacattgcttaactccagcaagcttccttaaacctttggcaaagctgttt
tctgttattcagaacaagttgtctcgtcaagcactttgtggggtttttgagacattatct
catttggaaagtaatataaaatatatcacagaaactgtcaagctgaatgctttcagtcca
caccatcttgatgagatcaactttgatgtccgtttgtcagcattccaggacatcatttct
catatcaaagggatgaacaaaatagatgtcaactaccttatcccggtaatgcataactgt
ttctacactatacagttagaggaaatggctttaagtgacaatgctgttctctgcttgact
gccattattcaaagattttctgaacttgagcatacagaggatgaattcaaggaaattatt
cagcatacacttctggattctttgagaaaagggctaaagagcaagattgagtgcattcaa
caggattacacatcattgctatcaaacttgattcgagcattttcagaacatccagagttt
catgacttggtccagctgactgattatcatgatccagagatggacttctttgaaaatatg
aagcatattcagattcacagaagggcacgagctctgatgaaactagctaagcagttagtg
gaaggcaaaaccatactgagttctaaaactcttcaaaattatattatgccttatgcaacc
actaccattttcaatgagaaaatgcttaagtatgaaaacatggtaactgcatcagttgag
atggtgggagctgtatgcagacatctttcttggtcagcttatctctaccatttgaaacat
ttcatccacgtattgcagactggacagatcaatcaaaaacttggtgtcagcgtgctagta
atggtgctggaggcttttcattttgaccatgaaactcttgaaaagcagctttcaattatt
gaaaaggaagagaatgaaaccatggaggtagaacttagtgatggagaagaagaaggccaa
aagaccagcgaagaacagtcctgtgtcaatgaacagaaagaatatgccgaatctaggtct
gatcagcctgctaatgaagaagtcgagaatttccagaaagttacaaaaccaccttcattc
ctgcccaggaataaggaagagttggagtgtctgattaaacatattcaggaaacagtgact
cgcaatatattgcccaaattgcacaggtgtcttattgcaaaggtgaaaagagatgaacag
cacaagatggtgaaatccaagattgtcaatgatgaagaggtagtacaagtgccaatagct
tttgcaatggtcaagctaatgcaatcccttcctcaggatgctatggaggagaatttgcca
ggaattcttctgaaagtctgctctcttctgaggaatagagcacaggaaatccgggatgtt
gcacgtaacaccttgatgaaaataatagaggctttggggccacaatacttgcaatatgtc
ttaaaagagatggtgtcaatccttgtcactggttaccaggtccatgtgttaactttcact
gtccacctcttgctgaagagtcttgccaacgagcgacttaaagttggtgatttggatcca
tgcatagaactgttgatggaaattttccaccgtgaattgtttggggaaattgctgaagaa
aaagaagtaaaaggcatcgtttccaaagttatggaagctcgtagaagcaaaagttacgat
tcttatgaaatccttgccaaatatgtaggaaaaaaccaagtgattaagcttattcttcca
ttaaaagaggttttggagaatacaaccagcctaaaactgtctcgaaaggtgcatgaaacg
ttacgacgaattgtgtctggactgatagtgaacaaggccatgactgcagagactgttctt
ctcctcagccatggtttgattagtgaaaatctaccattgctaacagaaaaagcaaaaatg
aaagctgcagttcctccagatcctcgtttgcaaccagagagctgcctccttctgccaccg
actcccattcgaggaagtcaaaaagcgcctgtgagcagcaagactaacatgcatgtcttg
gttgagtcagggctccggctgctgcacatgagtttgaagagatctaaaataaattcttca
gatgagcgtgttttagaaatgatggatccatttgtacaactgcttatcagctgccttcag
tccacagatattaaggtgatcactggtgctctccaatcatttctctgggttttaaagttt
cctctacctgcaatagataataatgtggaacagttaacgacacagctgttcctcctattg
aaggattttgctaaacaaggcacagttaaagggcagaattttcatttggttgtcaattgt
ttcaaatgtgtaagtctgctggtgaggaatacaaagagtcagattacagataaacaactg
caaattttgctcggatatgctgaagaagatatttatgactcattacgacaaaccactgct
tttggcctcttaaaggctattttatctagaaaattgatagttccagaaatcgaaggtgtc
atgcagaaggttgcagattttgccgttacaggccaaagcgaacaagttcgaattcaatgt
agacagatttacctgaaatacataattgattatccccttgggaaaaagttaaaacccaac
ctggagtgtatccttgcccagcttaattatgaatatgagacgggaagagagtctgctttg
gaaatgattgcttatctctttgaaacgttccctcagggcttattgcatgagttttgtggc
ctattctttgtcccattatgtatgatgatagtaaatgatgattcagcaaagtgcaagagg
atggcggcactggcgatcaaaaatcttctcagcaaaattagttctgcaaaccgagacctg
atgttttccctggttgcttcgtggtttacaagtaaaaagagtgtacagaagagattagct
gctcaagcctgtggagcatttgttgaagctgaaaaaattgaatttgagaaaagacttgga
actattctccctgttatcgagagagaaattcatccctcaaattttgaagaagttaaagaa
gagactgacgaaaagctggcagacagattgctcttcagcttcctaactttgcttgttaaa
ctaatcaatgagtgcaacattattcaattaaacaaacaccatgagattctgatcaacatt
tggggtcatgtccagtcccatttatggtacccacacagctgggtgtggctgacttctgct
cagatttttggcctgctgtttgcttctcacaagccagaagaacttgttaataaatggagc
aaaagaaaaacagaaaagaaacaagtgacacatgagccatcagcaacaattttcttaata
gaggaacttagtgaaaagatgaaaacacttgctttagctttctgccatcagctgaaatcc
aaatttctcagtgacagccttggagaacaggttataaagaatttactgtttgtatccaaa
gtactgtatcttctggctcctactccagaagatggcaaagagattggtgaggatgtggtc
tgggaaactgaagatcagggtgacttaggaagtgaagatgagaaagaggtttcgggtatg
gaggcaaaagaaaagagcagtccagccagtttgttgtgggtaatgaagaaagtcctagtc
atggcaacgagagaagctgctcattcacccaaagattctttaaagagaacctgcatcttt
aagtttcttggtgctattgcagttgaccttgggaaagagaaggtaaaaccgtatcttcca
acaatcatagcccctctatatagagaactgagtagcacgtatgcagaacaagatccaact
ctaaagaatctttcccaagaaatcatagaactactgaagaaattagttggattggaggac
ttttcaatttcatttgcttttgtgcaaaaacaagccagtcagaggagagctaaacgaaag
aagcagagagccctacaggctgttgctaatcctgagattgctgccaagaggaagttaaag
aggcataagaataaaattgaagcaaagaagagaaaaatagaatttctacggcctggttac
aaagctaaaaaacaaagaagccatgcattaaaagatttggcaatggttgagtaa
DBGET
integrated database retrieval system
