Pituophis catenifer annectens (San Diego gophersnake): 139319965
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Entry
139319965 CDS
T11059
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04150
mTOR signaling pathway
pcae04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139319965 (LRP6)
04150 mTOR signaling pathway
139319965 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139319965 (LRP6)
Membrane trafficking [BR:
pcae04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
139319965 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
139319965
NCBI-ProteinID:
XP_070804165
LinkDB
All DBs
Position
Unknown
AA seq
1613 aa
AA seq
DB search
MGAVLRSLLVCGLCALARASPLLLYANRRDLRLVDAADVTENATIVVGGLEDAAALDFVF
IHGLIYWSDVSEEAIKCTKFNQSGSVQNIVISGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPVRGFMYWTDWGEMPKIERAGMDGSSRSVIINAD
IYWPNGLTLDYEEQKLYWADAKLNFIHRSNLDGTHRQAVIKGSLPHPFALTLFGDTLYWT
DWTTRSILACNKYTGQNLREIHSNIFSPMDIHVFSQQRQPSAPNPCRNNNGGCSHLCLMS
PIKPFYRCACPTGVKLLENKKTCKDGAMELLLLARRTDLRRISLDTPDFTDIVLQLEDIR
HAIAIDYDPVEGYIYWTDDEVRAIRRSFLDGSDSQFVVQAQIAHPDGIAVDWVARNLYWT
DTGTDRIEITRLNGTMRKILISEDLEEPRAIVLNPMMGYMYWTDWGEIPKIERAALDGSD
RVVLVNTSLGWPNGLALDYIENLIYWGDAKTDKIEVMKIDGTSRRVLVEDKLPHIFGFTL
LGDYIYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHKILGTNPCAESNGGCS
HLCLYRPQGLRCACPIGLELLNDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
SERCTLVPNVGRANGLTIDYVKRRLYWTDLDTNLIESSNMLGLDREVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQNHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNPDNRTCSAPTSFLLFSQKNAINRMIIDGLKSPEIILP
IHSLRNVRAIDYDPLEKQLYWIDSRQNIIRRSQEDGSQSSTIVMSPVPNQNLDIQPYDLS
IDIYSRYIYWTCEATNVINVTRLDGRLMGVVLKNEQDRPRAIVVNPEKGYMYFTNFQERS
PPKIERAALDGTEREVLFSSGLSKPVALAVDNNLGKLFWADSDLRRIESSDLSGANRIVL
EDSNILQPIGLTVFEKWLYWIDRHQQMIEKIDVTRQEGRTKVQARIAQLSDIHAVKELNM
QEYRQHPCSQDNGGCSHICIIKNDGTTRCSCPMHLVLLEDELSCGEPPTCSPQQFTCYTG
EIDCIPVSWRCDGFTECEDASDEKNCPLCSDSQFQCESGQCIDATLQCNGEPNCQDNSDE
KKCKVLCLTDQFRCASGQCIGKNKKCDHSLDCNDNSDEQGCYTTEEPAPPATNTIGSIIG
VILTVFVVGAMYFVCQRVLCPRMKGDGETMTNDYVVHGPSSVPLGYVPHPSSLSGSLPGM
SRGKSVISSLSIMAGSSGPPYDRAHVTGASSSSSSSIKGTYFPPILNPPPSPATEDSRYT
MEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVMTVGGKGYASDL
NYDSEPTPPPPTPRSQYLSAEENYESCPPSPYTERSYTHHLYPPPPSPCTDSS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgtcctgcggagcctcctggtctgcggcttgtgcgctttggcgagagcatct
ccactgttgctttatgcaaatcggcgtgatcttcggctggtggatgctgcggacgtgact
gagaatgctacgattgtggtgggtggcttggaagatgctgctgcgctggactttgtcttc
atccacggtttaatatattggagcgacgtcagcgaagaagccattaaatgcacaaaattc
aaccaatccggaagtgtgcaaaacattgtcatttctgggctcttgtcacctgatgggcta
gcttgtgattggctgggtgaaaaactgtactggacggattctgaaacgaaccggatcgaa
gtttccaatttggatggatctttgcgaaaggttttattctggcaagaactggatcaaccc
agagcgattgcattagatcctgtacgagggttcatgtattggacggactggggagaaatg
ccaaagatagaacgggctggcatggatggttcaagccgttcagttatcatcaatgcagat
atttattggccaaatggattaaccttggattatgaagaacagaagctgtattgggcagat
gccaaactgaacttcattcacagatcaaatctggacgggacacataggcaagctgtgatt
aaaggatccctgccacatccatttgctctgacgttatttggtgacaccctatattggacg
gattggacaactcgctccatcctggcctgcaacaaatacactggacagaacctgcgtgaa
atacattccaacatcttttctcccatggatatccatgtcttcagccaacagcggcagccc
agtgctccaaacccatgcaggaataataatggtggctgttcccatctgtgtttgatgtct
cccatcaagcccttttatcggtgtgcctgtcccacaggtgtgaaactccttgagaataag
aagacttgcaaagatggagcgatggagttgctactgctggcccgaaggacggatttgagg
cggatctctttggacactccggatttcacagatattgtgctgcagttggaagacattcgt
cacgccattgccattgactatgaccccgtggaagggtacatttattggacagatgatgaa
gtgagagccatcaggcgttcgttcctcgatggctcagatagccagtttgttgtacaggca
caaattgcacaccctgatggcattgctgtagattgggtggcccgaaatctttactggacg
gatacggggacagaccgcattgaaatcacgaggcttaatgggactatgaggaagatcttg
atctcagaagacctggaagagccgagagctatagttttgaatcctatgatgggctacatg
tactggaccgactggggagagattccaaagattgagcgggctgctttagatggttctgac
cgagttgtactggtaaatacctcacttggttggcccaatggattggcactggattacatt
gaaaacctgatatactggggagatgccaaaacagacaaaattgaggtcatgaaaatagat
ggaaccagcagaagagtccttgtggaagacaagctgccccacatctttggtttcactctg
ctgggggactatatttattggacagactggcaaagaagaagtattgagcgggttcataag
cggacagcagaaagggagatcataattgaccagttgcctgatctcatgggcctcaaggct
accaacgtccacaagatcttgggtacaaatccttgcgcagaatccaatgggggatgcagc
cacctctgcttgtataggcctcaaggattgcgctgcgcctgccccatcggcctggaactc
ctgaatgacatgaagacctgcattgtcccagaagccttcctgctgttttcccgtagagcg
gatatcaggcgaatctctctcgagacaaacaacaataatgttgctattccattaacagga
gtcaaggaagcctctgccctggattttgatgtgactgacaatcgcatatattggacagac
atctcgttgaagaccatcagtagagctttcatgaacggaagtgccttggaacacgtggtt
gagtttggattggattatccagaaggcatggctgtggattggttagggaagaatctctac
tgggcagatacgggaacaaatcgtatcgaagtgtcaaaattggatgggcaacatcgccaa
gttctggtctggaaggatcttgacagccctcgggcgctggctctggatcctgctgaaggg
tttatgtactggaccgaatggggtgggaaacccaagattgaccgagcagccatggatggt
agtgaacgttgtactttagtgccaaatgtggggcgagcaaatggtctgacaatcgattac
gtcaaaagaagattgtattggactgacttggataccaatttgatcgaatcttcaaatatg
ctgggccttgaccgcgaagttatagccgatgatttaccgcatccctttggcctgactcaa
taccaggattacatctactggacagactggagccgacgtagcatcgaacgtgccaacaag
accagcggacagaatcggaccatcatccaaaaccacctggattacgtgatggacatccta
gtcttccattcatcccggcaagctggctggaatgagtgcgcttccagcaacgggcactgc
tcccacctctgtctggcagtgcccgtaggtggctttgtctgtggatgtcctgctcattat
tccttgaaccccgacaacagaacatgtagtgcccctacaagtttcttgctcttcagtcag
aagaatgcaatcaatcgtatgataatcgatgggttgaagagtccagagatcatccttccg
atacacagcctcagaaatgttcgggcaatcgactatgatcccctggagaagcagctttac
tggatcgactctcgccaaaacattatcagacggtcacaagaggatggcagtcagagttct
accattgtgatgagtcccgtccccaaccaaaatctagatatccagccatatgatctgagt
attgatatttacagccgttacatttactggacttgtgaagccacaaacgtcatcaatgtc
acgcggctggatggacggttgatgggcgtggtgttgaaaaacgaacaggatcggcccaga
gctatcgttgtgaatccagagaaggggtacatgtatttcaccaacttccaagaaagatct
ccccctaaaattgaaagggcggcattagatggaactgaacgggaggtcctcttttccagc
gggctcagtaaacccgttgccttggccgtcgataacaatttggggaagttattctgggca
gactccgacctgcggagaatcgagagcagcgatctgtctggtgcaaatcggatagtatta
gaagattccaacatactgcagcctataggcctgaccgtatttgaaaaatggctttactgg
attgatcgtcatcaacagatgattgagaaaattgacgtgactcgccaagagggacgtaca
aaggttcaggctcgaattgctcagctgagtgacatccatgccgttaaagaactcaacatg
caggaataccgacagcacccctgctcccaagataacggtggctgttctcacatctgcatt
ataaaaaacgatggaactacacgttgctcctgtcccatgcatctagtccttcttgaagat
gaactttcctgcggagagcctccaacttgctccccgcaacagttcacgtgttacacagga
gagattgactgcatccctgtgtcctggcgttgtgatgggttcacggagtgtgaagatgcc
agtgatgagaagaactgccccttgtgctccgattcccagttccagtgtgagagcgggcag
tgcattgatgccaccctgcagtgcaacggagaaccaaattgtcaggataactcagacgaa
aagaaatgcaaagtgctttgtttaactgaccagttccggtgtgcgagtggtcagtgcatt
gggaaaaacaagaaatgtgatcacagcctagattgtaatgacaattcagacgaacagggc
tgctacacaaccgaagaaccagccccacctgccaccaacacaatcggctccatcatcggt
gtgatccttacggtttttgtcgttggtgcgatgtacttcgtttgtcagagagtgctgtgc
ccacgcatgaaaggagatggagaaacaatgaccaatgactacgttgtccatggaccgtct
tctgtgcctctgggttatgtgcctcacccaagctccctttctggatctcttccaggaatg
tcccgcggtaaatctgtgatcagttcacttagcatcatggcaggaagcagcggcccacct
tatgacagagctcacgtcaccggggcgtcctccagcagctcctccagcatcaaaggaacc
tacttccctccaattttgaaccctcctccatcaccagcaacagaggactcccgctacaca
atggaatttggttattcgtccaacagcccttctacacacaggtcatacagctacaggccg
tacagctaccgccattttgcacctcccacaaccccgtgcagcaccgacgtttgtgacagt
gactacgcacccagccgtcgggtgatgaccgtggggggcaaaggctatgccagcgacctc
aactacgattctgagcccacgccaccgccacccaccccacgcagccagtacttgtccgca
gaggagaactatgagagctgcccgccctccccgtacacagagcggagctacacacaccac
ctctacccgccgcccccttctccttgcaccgattcctcatga
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