Pituophis catenifer annectens (San Diego gophersnake): 139320076
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Entry
139320076 CDS
T11059
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04140
Autophagy - animal
pcae04148
Efferocytosis
pcae05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139320076 (VPS16)
04148 Efferocytosis
139320076 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139320076 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139320076 (VPS16)
Membrane trafficking [BR:
pcae04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139320076 (VPS16)
Hops complex
139320076 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
139320076
NCBI-ProteinID:
XP_070804311
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MDCYTANWDPLGESAYYRKLELYSMSWNLKEDLRDYLVAAAPYGGPIALMKNKKEKSPSS
RPVLEIYSASGIQLASVVWKDSPAMFLGWTTSEELLSVQENGIVLLHSLFGEFKKKVTMT
SDAVQERVLEARVFYTTYGTGLVILSALQHRFSLANNIYDMKVRKLPVVPGLQGPPSCWT
VLCQNRVTKILLAVGQELYLLDDAAYNPVTLPWLSLHAGSFLRMAVSFNHRFLALFTDTG
YLWMGRSNLKEKMAEFTCDYRSPPKQMAWCTRQHSRQRAVVMAWDRCLMVAGSDQQSIQY
PLSEDSHLVPELDGVRIFSRSTHEFLHEIPEASEEIFKIASMSPGALLLEAQKEYEKESQ
KADEYLREIKDQKLLPEAVEQCIKAASYEHSPPIQKALLQAASFGKCFIDKFAPENFVET
CRDLRVLNAVRDYQIGIPLSFDQYKQLTKEVLLDRVVLRRLYPIAIKICEYLRLSEFQGI
SRILAHWACYKVQQRDKSDEELAQVINQKLGDAVGISYSDIATQAYESNRTELAIKLLEY
EPRPGKQVPLLLTMKRSQLALSRAIESGDSDLVYTVISRLKDELGRGDFFMALQNQPVAL
SLYRQFCKHKEPNTLKDLYNQDDNHQELGNFHVRSSYVSEKWIEGRVASLQNAVDEYYKA
KNEFAAKATEDQIKLLRQQRRFQDDFDKPYVDLSLHDTVYSLILDGKHKLAEQLYRDFRI
PDKRFWWLKISALAEQGAWEDLEKFSKSKKSPIGYLPFAEISMKYANPSEAKKYAARVTP
EQKVKALLLVGDFSHAAEAAVERKNEAEMVLILSKCTDATVVAKLEQAKAQLGKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggattgctacacggccaattgggatcccctgggggaatccgcctattatcggaaactg
gaactttatagcatgagctggaatttgaaggaagacttgcgggattatttggtggctgca
gccccgtatggcggtcccatcgccctgatgaaaaacaagaaggagaaatctcccagctcc
cggcctgttctagagatctactctgcctctggaatccagctggccagcgttgtgtggaag
gattccccggcgatgttcctgggctggaccaccagcgaggagctgctcagcgtccaagaa
aacggcatcgtccttcttcacagcctgtttggcgaattcaagaaaaaagtcaccatgacc
agcgacgccgtgcaggaacgagtgctggaggccagggtgttttacacaacttacggcacc
ggtttggtcattctctccgcccttcaacaccgcttcagcctggccaacaacatctacgac
atgaaagtacggaagcttccggtcgtgccaggtcttcaaggccccccctcctgctggacg
gtcctttgccaaaacagggtcaccaaaattctccttgcggtcggacaagagttgtacctt
ctggatgacgcagcctacaatccggtgaccctgccttggcttagtctgcatgccggctcc
ttcctcaggatggccgtgtcgttcaaccaccggtttttagcgctcttcaccgacaccggc
tacctctggatgggccggtcgaacttaaaggaaaaaatggctgaattcacttgcgactac
cggtcccctcccaagcagatggcctggtgtacgcgacaacacagccggcagcgtgccgtt
gtgatggcctgggaccggtgccttatggttgctggaagcgaccagcaaagcattcaatac
cctctgagtgaggattcgcacctggtcccagaactggacggggtgcgcattttctctcgt
tccactcacgaattcctgcacgagatcccagaggccagtgaggagatcttcaaaatcgcc
tccatgtcgcccggggccttgctgcttgaagcgcagaaagaatatgagaaagaaagccag
aaggcggatgaatatctgcgtgaaatcaaggaccagaaactgcttcccgaggccgtcgag
caatgcattaaagcagccagctacgaacattccccgcccatccagaaagctctgctccag
gctgcctcttttggaaaatgcttcatcgacaaatttgcaccggaaaactttgtcgaaacc
tgccgagatctgcgggtgcttaacgccgtccgagattaccagattgggatccctctcagc
ttcgatcaatataaacagctgactaaggaggttttgctggatagggtggttttgagaaga
ctgtatccaatcgccatcaagatttgcgagtacctccgtctctccgaattccaagggata
agccggattttggcccactgggcctgttacaaggtccaacagagagacaaatctgatgaa
gaattggcccaagtcatcaaccagaaacttggcgacgccgtgggcatttcgtattcggac
atcgcgacccaggcttacgagagcaaccggacagagctggctattaagctgctggaatac
gaaccccggccgggaaagcaggtgcctcttttactgaccatgaaaagaagccagctggcg
ttgagcagagccatcgagagcggggacagcgacctggtttacaccgtcatctcgcgcctg
aaggacgaacttggccggggcgattttttcatggcgttgcagaaccagcccgtggcgttg
agtctctaccgtcagttctgcaaacataaggagcccaacacactcaaagatctctacaat
caagacgacaatcaccaagagctgggcaacttccacgtccgtagcagctacgtcagcgag
aagtggatcgaggggcgtgtggccagtctgcagaacgcagtcgacgagtactacaaagcc
aagaatgagtttgcagccaaggccactgaagaccagatcaagctcttgcgtcaacagcgt
cgcttccaggacgacttcgacaaaccctacgtggacctttctctgcacgacaccgtctac
agcctcattcttgacgggaagcacaagttagccgagcaactttaccgggatttccggatc
cctgataaacggttctggtggctgaagatcagcgccttggcggaacaaggggcctgggaa
gatctagagaagttctccaagtccaaaaagtcacctatcggctacctgccctttgccgag
atcagcatgaagtacgccaacccgagcgaagccaagaagtacgctgcccgagtcactccc
gaacagaaagtgaaggctctcctcttggtgggggacttcagccacgctgccgaagccgcc
gtggagcgcaagaacgaagcggaaatggttctcatcctctccaaatgtaccgacgccacc
gtggtggctaaactggaacaggcgaaagctcaactgggaaagaaatga
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