KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139320204
Entry
139320204         CDS       T11059                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcae03400]
    139320204 (HELQ)
Enzymes [BR:pcae01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     139320204 (HELQ)
DNA repair and recombination proteins [BR:pcae03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    139320204 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DNA_pol_lambd_f Cdd1
Other DBs
NCBI-GeneID: 139320204
NCBI-ProteinID: XP_070804527
LinkDB
Position
Unknown
AA seq 1054 aa
MEGSGAVRRRTQERRRRRRQRPGQGADSPGINCRARSRSTSPPVRKKLNSDEGEEELEEP
KAEYFDSDDMFADYDSFSANNSFLTEIDDLEQKHVHFSTNSPNSDSLDRNIAVQPVGGVT
QMSNARNLAQVFSETNTAISSRDIQEYDSWKRMKEQDNSSEPQDNDLESLPSSQLFFRQH
SEECSQTATVIKEIPCQLDFSDLPYRSDTEANEQDCKSVFEPGRRKSLKDHLKNAMAGNA
RSSASLVSKSKQRKEAIATEEMAVAETTDDSLAFVDIGPFYGLPTKVKELLLQIRGIEKL
YDWQHNCLTFESLQKRKNLIYSLPTSGGKTLVAEILILRELLCKQMDVLMILPYVALVQE
KVGSLCGFGMELGFLVEEYAGSKGRIPPIKRRQKKSVYIATIEKGHSLVNALIEAGRIDT
LGLVVVDELHMLGEGGRGGILEMTLSKILYASKTAQIIGMSATLRNVEDLQQFLKAEFYT
SNFRPVELKEYVKIKDSIYETDSKAENGLKFSRLLDFKYSSELQKVDPDHLIALVTEVIP
KYSCLVFCPTKKNCENVASMICKHINRDLKKVKEKEKYNLLKELRNICSGKLCPVLKRTI
PFGIAYHHSGLTSDERKCIEAAYSSGLLCLLTCTSTLAAGVNLPARRVILRAPYVATDFL
KKNQYKQMIGRAGRAGIDKAGESILIVQEKDKELVQNLITSPLESCYSTLLLDSNKGIRS
LLLSVVGLKIANNPEEIYQFMCATLLSIQPQLLPNKSLRDVTMEALQWLKENGLLKEREN
SDGEKNCQNNLGITQLGRATYKGSVELAHCDTLYADLKKGLEGLILESYLHLIYLITPYD
MIPQCSPNWMVYFKQFNQLSPIEQQVTSTVGVPESFITKKASGQAIKNELDSNTVNRLYL
SLILHTLLRETNIWDVSEKFNIPRGFVQSLLNSAASFSSSVLHFCEELDEFWVYKALLPE
LTKRLSYCVKAELIPLMEVAGVLEARAKQLYNLGYKTLAHLANADPELLVKSVVHMSRTQ
ARKIVSSAKMLLAEKTEALQEEVEELLRIPTDVP
NT seq 3165 nt   +upstreamnt  +downstreamnt
atggagggcagtggggctgtcaggagaaggacgcaggagcgaaggaggcggcggcgacag
agaccgggtcaaggggcggactcgcccggcataaattgcagagcccggtcccggtcgact
tccccgccggtccgcaagaaactaaattcggacgaaggcgaggaagagctggaggagccg
aaggcggagtattttgacagcgatgatatgtttgcagactatgacagcttttctgccaac
aactctttcttaactgaaatagatgatttagagcaaaagcacgtgcactttagtacaaat
agtccgaattctgacagtttagatcgcaacattgctgtgcagcctgtaggtggagttact
cagatgtcaaatgccaggaacctggcacaggtattttcggagacaaacactgcaattagc
tccagagacatacaggaatatgattcttggaaaaggatgaaggaacaggataatagctca
gagcctcaggataatgatttagaaagccttccgtcctcccagcttttctttcgtcaacat
tcagaggaatgttctcagacagcaacggtcataaaagaaataccctgtcagctcgacttc
tcagatctgccgtaccgcagtgacacagaggctaatgaacaagactgtaagtcagtgttt
gaaccaggtaggcggaagagtctcaaagaccatctcaaaaatgccatggctgggaatgcc
agatcctctgcttcgttggtttctaaaagcaaacagcggaaagaagctattgcaactgaa
gaaatggctgttgcagagacaactgacgacagcttggctttcgtagacattggccctttc
tacggtttacccaccaaagtcaaggagctactgctacagatcagaggaattgagaagctt
tatgactggcagcataactgcttaacgtttgaatcgctacaaaagcgaaagaacttgata
tattccttgccaaccagtggtggaaaaactcttgtcgccgagattctaattcttcgagag
ttactctgcaaacaaatggatgttttgatgatcctgccttatgtggctttagtccaggag
aaggttgggagtttgtgtggttttggaatggaactcggtttcttggtggaagaatatgca
gggagtaaaggaaggattcctccaatcaagagaaggcaaaagaaatccgtgtacattgct
actattgaaaagggacacagcctggtgaatgccttgatagaagcaggaagaatcgacacc
ctgggtctagtagtagttgacgagttgcatatgcttggagaaggtggccgtggcgggata
ctagaaatgaccctttctaagattttatatgcaagcaaaacagctcagatcattggaatg
agtgcaaccttaagaaatgttgaagacttacagcagttcctgaaagcagaattctacaca
agtaatttcagacctgttgaattgaaagaatatgttaaaataaaggacagcatctacgaa
accgatagcaaagcggaaaatggccttaagttttcacggctccttgattttaagtattct
agtgaactgcagaaggtagatcctgatcatcttattgcattggtcacggaggttattccc
aagtactcctgccttgtcttctgccctactaaaaagaactgtgaaaatgtagcaagcatg
atatgcaaacacataaacagagaccttaaaaaggtcaaggagaaagaaaaatacaatctt
ctaaaagagttaagaaacatctgcagtgggaaactttgcccggttttgaagcggacgatt
ccgtttggaattgcttaccaccacagcggtctcaccagcgatgagcggaaatgtatagaa
gcggcttattcctcaggcctcctctgtctgctaacctgcacatctacgcttgctgcagga
gtgaacctgcccgctcgaagggttattttaagagcaccgtatgttgctacagacttcttg
aagaagaaccagtataaacagatgattggtcgagctggtcgtgctggcattgacaaggct
ggtgaaagcattctgattgtgcaagagaaagacaaagaactggttcaaaatttaataacc
agtccgttagaaagctgttacagcactcttctgcttgattccaacaagggcatccgaagt
ttactcttatcggtggttggtttaaagatagcaaacaatcctgaggaaatttaccagttc
atgtgtgccaccttacttagtatacagccacagctcctgcccaacaagagcctgcgggat
gtaacaatggaagcgttacaatggctgaaagaaaacgggctgctaaaagagagagaaaat
tctgacggcgaaaagaactgtcagaataatctagggatcactcagttgggccgagctacc
tacaaaggttcagtggaattggcacactgtgacaccctctacgcagacttgaagaaagga
cttgagggactaattctcgaaagctaccttcatttgatctacctgataacaccctatgat
atgattccccagtgtagcccaaattggatggtctattttaaacagttcaatcaactaagt
ccaatagaacaacaagtaaccagcactgttggagtgccagagagctttattaccaagaag
gcatctggacaagccatcaagaatgaactggatagtaatactgttaatagactttacctg
tccctcatccttcataccttgttaagagagaccaacatatgggacgtgtcagaaaaattt
aatataccgcgaggatttgttcaatctcttctcaattcagcggcttcattctcctcctcc
gttttgcatttttgtgaggagctggatgagttttgggtttataaagccctcctgccagaa
cttaccaagagactaagctattgtgtcaaagcagaacttattcctcttatggaggtggcg
ggagttttggaggctcgagctaagcaactctacaatttaggctataaaactttagctcac
ttggccaatgcagatccagaacttctagtcaagagtgttgtacacatgtccagaactcag
gccaggaaaatagtttcatctgcaaagatgctcctggctgagaagactgaggctttacaa
gaagaagttgaagaattactacggatacccacggatgttccatga

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