KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139320276
Entry
139320276         CDS       T11059                                 
Symbol
WDR1
Name
(RefSeq) WD repeat-containing protein 1 isoform X1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pcae04990]
    139320276 (WDR1)
Domain-containing proteins not elsewhere classified [BR:pcae04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   139320276 (WDR1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 eIF2A Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 NBCH_WD40 Ge1_WD40 RMC1_N PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_ELP1_1st PROPPIN Beta-prop_DCAF12 DUF5711 Beta-prop_WDR11_1st PQQ
Other DBs
NCBI-GeneID: 139320276
NCBI-ProteinID: XP_070804617
LinkDB
Position
Unknown
AA seq 607 aa
MPYQLKTVFASLPQVERGISKIIGGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHAHQ
VVVAKYAPSGFYIASGDISGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAAV
GEGREKFGAVFLWDTGSSVGELAGHNKVINTVDIKQTRPYRLATGSDDNCAAFFEGPPFK
FQFTISDHSRFVNCVRFSPDGNRLATASADGQIIIYDGKTGEKIDALGGNKAHDGGIYAI
SWSPDGHRLLSASGDKTAKIWDVGAQSVVTTFKMGSDVLDQQLGCLWQKGHLLTLSLSGY
INYLDENNPNKPLCIIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDGFG
GKGHTNLVSRMAVDDFEQLVSCSMDDTVRYTSLKKKEYSSQDVIKMDVQPKCVAVGPGGY
AVVICIGEIILMKDKKKCLAIDNPGFEPEAVAVHPGGGTAAVGGTDGKVHLYAIHGASLK
SEEKVLEAKGPVTDLAYSPDGAFLAVTDANKVVTVFSIADGYGEHNLFYGHHAKIVCVAW
SPDNEHFATGGMDMLVNVWTLSDPETRVKIPDAHRLHHISSLAWLDENTLVTTSHDASVK
EWSISYK
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgccctaccaactgaaaacggtgtttgccagcctcccgcaggtcgaaagggggatctcc
aaaatcattggcggagatccgaaaggcaacaatttcttatataccaatggaaaatctgtc
atcattcgaaacatagataacccagcaattgctgacatctatactgaacatgcccatcaa
gttgtggtggccaagtatgcacccagtggcttctatatcgcatctggagatatctctgga
aagcttagaatttgggacaccacacagaaggaacatctattaaaatacgagtatcagcca
tttgcaggaaaaataaaagatattgcatggactgaagatagcaagagaattgctgctgtt
ggagaaggaagggaaaaatttggagcagtcttcttgtgggatactggttcttcagtaggt
gagcttgcaggtcacaacaaagtaataaatacagtggacattaaacagacgaggccttat
cgcttagcaacaggcagcgatgacaactgtgctgctttctttgaaggaccaccattcaag
ttccagttcaccattagtgaccacagccgctttgttaactgtgtgaggttctctcctgat
ggaaatagacttgctacagccagtgcagatggccagatcattatttatgatggcaaaact
ggagaaaaaattgatgctcttggtggaaacaaagcacacgatggaggtatttatgcaatt
agttggagtcccgatggccatcgccttctttctgcttctggggacaaaacagctaagatc
tgggatgttggtgcccagagtgtggtaactacatttaaaatgggatcagatgttctggac
cagcaattgggctgtttgtggcaaaaaggtcatttattgacattatccctttctggctat
atcaactatctggatgagaacaatcctaataagcctctttgcatcataaagggtcacagc
aaatcaatacagtgtcttacagtgcataaaaatggagggaaatcctatatatactctgga
agccatgatggacatattaattattgggattctgaaacaggagaaaatgatggatttggt
gggaaaggacacacaaacctagtttcccgaatggctgtggatgactttgagcagttggtc
agctgtagtatggatgatactgtgcgttatactagtcttaaaaaaaaggagtacagcagc
caagacgttataaaaatggatgttcaaccgaaatgtgtggcagttggacctggaggatat
gcagtggtcatatgcattggagaaattattttgatgaaggataagaagaagtgtcttgca
attgataaccctggttttgaaccggaagcagtggcagttcaccctggaggtgggacagca
gcagttggaggaacagatgggaaagtgcatttatatgcaattcatggagcttctttaaaa
agtgaagagaaggtcctggaagccaaaggaccagtaactgacctggcatattctcctgat
ggagctttcttggctgtgacagatgcaaacaaagtagtcacagtgttcagcattgctgat
ggttatggggaacataatttattctatggccatcatgcaaaaatagtttgtgttgcctgg
tcccctgataatgagcactttgctactggtggcatggacatgttggtgaacgtgtggacc
ctaagtgacccagaaacccgagtcaaaataccagatgcacacaggttacatcacattagc
agtttagcatggctggatgaaaataccttggtaacaacatcacatgatgcctcagtcaaa
gagtggtctatttcctacaagtaa

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