Pituophis catenifer annectens (San Diego gophersnake): 139320327
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Entry
139320327 CDS
T11059
Symbol
CNGA1
Name
(RefSeq) cyclic nucleotide-gated channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
139320327 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139320327 (CNGA1)
Ion channels [BR:
pcae04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
139320327 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
139320327
NCBI-ProteinID:
XP_070804676
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MGESETQHSDSDPRNLASHSKKESLENVEDGESSKTGDTKKNNTVGKEDKEEKKNESKPE
KKNNEEGKNEIFVIDPSGNLYYNWLFCITLPVMYNWTMIIARACFDELNHNSVEMWLILD
YSADFIYVADMFVRTRTGYLEQGLLVKEKSKLKKRYKQTSQFKFDLLSIMPTDLLYFKFG
LNYPEIRINRLLRISRMFEFFQQTETRTSYPNIFRISNLVMYIIIIIHWNACMYFSLSKA
IGFGTDTWVYPNITHPEFGRLARKYVYSLYWSTLTLTTIGETPPPVQDIEYWFVVVDFLV
GVLIFATIVGNIGSMISNMNAAREEFQAKIDAIKQYMQFRNVSKDLEKRVIKWFDYLWTN
KKAVDEREVLKFLPDKLRAEIAINVHLETLKKVQIFSDCEAGLLVELVLKLQPQVYSPGD
YICRKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTAN
IRSLGYSDLFCLHKDDLMEALIEYPEAKTLLEEKGKQILMKDGLLDLEQGNMKRETENLE
QKVSQIEGMLDNLQTRFAKLLAEYSAAQQKLKIRLKQVETIVKPSLEYDFSDLEELQRTS
GH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggggagagtgaaactcaacactcagattcagatcctcgtaatttagccagccacagt
aaaaaggaaagtcttgaaaatgtggaagatggtgaaagcagtaaaactggtgatacaaag
aaaaataacacagtgggcaaggaagataaggaagaaaagaaaaatgaaagtaaacctgag
aagaaaaataatgaggaggggaagaatgaaatatttgtcattgatccctctggaaatctt
tattacaactggttgttctgcatcacattgcctgtcatgtacaattggacaatgatcatc
gctagggcctgttttgatgaacttaatcataacagcgtagaaatgtggttgattttggac
tattctgcagattttatttatgttgctgacatgtttgtgcggacgaggacaggttacttg
gagcaaggcttgttggtgaaggaaaaatctaagctcaagaaaagatacaagcaaacatca
caattcaaattcgatctgctgtccatcatgccaactgatctactttacttcaaatttgga
ctgaattacccagaaataagaataaacagattacttagaatatcacgcatgtttgaattc
ttccagcaaacagaaacgaggacaagttatccaaatatcttcagaatctctaatcttgtc
atgtacattataattatcatccactggaatgcttgtatgtatttctccctctcaaaagcg
atcggctttggaacagacacatgggtctatcccaatattactcatcctgaatttggcaga
ctcgctagaaaatatgtgtatagtctttactggtcaacactgactttgacaactattggt
gaaacacctcctcctgttcaagatattgagtattggtttgttgttgttgatttcttggtc
ggcgtattaatctttgctactattgttggtaatattggttctatgatctctaatatgaat
gctgcccgggaggaatttcaagcaaagatcgatgctatcaagcaatatatgcagtttcgt
aatgtaagcaaagatttagaaaaacgggttatcaaatggtttgattatttgtggacaaat
aaaaaggccgtagacgaaagagaagtcttgaaatttcttccggataaattacgagcagaa
attgctattaatgttcatttggagacattaaaaaaagtccagattttctcagactgtgaa
gctggtctgttagttgagctggttctgaaactacaacctcaggtatatagtcctggtgat
tatatctgccggaaaggtgatattgggcgagaaatgtatattatcaaagaaggaaaactt
gcagtggtagctgatgatggaataactcaatttgtggttcttagtgatggcagctatttt
ggagagattagcatccttaatattaaaggtagcaaagctggaaataggaggacagctaat
attagaagtcttggctattcagatttgttttgtctgcataaagatgacttgatggaagct
ttaatagaatatccagaggcaaagactttgttggaagagaaggggaagcaaatccttatg
aaagatggactactggatttagagcaaggaaacatgaaaagagagacggaaaacctcgag
caaaaggtcagccaaatagaaggaatgctagataatttacaaacaagatttgctaaactt
ttagctgaatatagtgctgcacagcagaaattgaaaataaggttaaagcaagtcgagacc
attgtaaaaccatccctagagtatgatttttcagacttagaagaactgcagagaacttct
ggtcattaa
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