Pituophis catenifer annectens (San Diego gophersnake): 139320430
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Entry
139320430 CDS
T11059
Symbol
DTL
Name
(RefSeq) LOW QUALITY PROTEIN: denticleless protein homolog
KO
K11790
denticleless
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139320430 (DTL)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139320430 (DTL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Nup120_160
MIOS_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
139320430
NCBI-ProteinID:
XP_070804857
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MSQYKGVASACGGIGEANGKEGARLLAARVANSGRKXVFGADFGLAGDLCGEAILFPAGX
RAVIIELPAAGVVVMLCRSLVRRCQDGPQGLAPRFSLHHLLGQYQCIKEDDHPSYGEMGI
PVPPFGCSFSTAPDVQHVLGVANEEGFVRLYDTHTQLSNKKIVKEWQAHLNAVFDLAWMP
YEHKIVTASGDQTAKVWDIKTGELLGVCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMIW
DTRCSKKDGFYRQVKQISGAHNIIDKTPSKLRKKKQNVKGLAPSVDFQQSVTVVLLQDEH
TLISAGAVDGVIKIWDLRKNYTAYRQEPVPSRVFSYPGNSTRKLGYSSLILDSTGTNLFA
NCTDDNIYMFCMPGLKNTPVSVFSGHQNSSFYVKSSISPDNQFLISGSSDQCAYIWKVSE
LQLPPMVLHGHLQEVTSVAWCPSDFTKISTCSDDNTIKIWRLRQSTAEKVLTDKTSLVGW
TDQKIVVKQNKIEVLSSRHGTPPKVLPTGSPLISSPQPAACAPIYTGDLPLPTNTPTSSS
VKTPTNLICTFTPAKQKVTSSTLSKLALTSTTSIQHWVTKTPNSSPPVRETKTVSPQIAA
ADIPDTAFASTSPHLRSETRAKRRLESSREENMMCLKRCNCMTEHHPESKKSRQEQFTLA
AGSKPCRGDYLTLNGEVQNIQSLKEPFSPSSPCSSATCLNYPHLTKTSCEKMIDKENGST
DRRSWLSDLGNKLRTNKMNNYSGSSSLRNPSIKRMEARTGATSPGPIITTITMRKICTYF
ERKSQKT
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtataagggcgtggcatccgcttgcggtgggataggagaagccaatggaaaa
gagggggcgcggcttcttgccgccagggtagccaatagcggtagaaaanatgtctttggc
gcggacttcgggttggcgggagatctttgtggagaagctattctttttcccgcgggctaa
cgcgcggtgataatagagcttccagctgccggcgttgttgtgatgttgtgtcgttcgtta
gtccgtcgctgccaggatggaccgcagggtttggcaccaagattttccttacaccatcta
ttgggacagtatcagtgtattaaggaagatgaccatccttcctatggagaaatgggaatt
ccagttcctccttttggctgtagcttttcaacagctccagatgtgcaacatgtacttggt
gttgccaatgaagagggatttgttaggttgtatgatacccacacacaattgagcaacaag
aaaattgttaaagaatggcaagctcatttaaatgctgtgtttgatcttgcatggatgccc
tatgaacacaaaattgttactgcttcaggggatcaaactgcaaaagtgtgggatataaaa
actggtgaactcttgggagtgtgcaaaggacatcagtgcagtctcaaatcagttgctttt
tctaaatttgaaaaagctgtgttctgtactggaggaagggatggaaatatcatgatctgg
gacactcgatgcagtaagaaagatggattttacagacaagttaaacaaataagtggtgcc
cacaacatcatagataaaacaccatccaaactgaggaagaaaaaacagaatgtgaaagga
cttgcaccctcagtggatttccagcagagtgtaacagtggtactacttcaagatgaacat
accttaatctcagcgggggctgttgatggtgtgatcaagatatgggatctgcgcaagaac
tacactgcataccggcaggaaccagtgccctccagagttttcagctaccctgggaacagt
acccgtaaacttggatattccagtcttattttggattccactggaaccaacctatttgct
aattgcactgatgataatatatacatgttctgtatgccaggtctgaagaatactccggtg
tcagttttcagtggacatcaaaattccagtttctatgtcaaatccagcattagcccagat
aaccagttcttaatcagtggttcaagtgaccagtgtgcctatatctggaaggtatctgaa
ttacaacttcctccaatggtacttcatggccacctgcaagaggtcacttctgttgcctgg
tgtccatctgatttcactaagatttccacttgttcagatgacaacactatcaagatttgg
cgtttgaggcaaagcactgcagaaaaggtcttgacagacaaaaccagcttagttggttgg
actgatcaaaagatagtagtaaaacaaaacaaaatagaagttcttagcagcaggcatggt
actccacctaaagttcttccaacaggcagccctcttatttcttcaccacagccagctgct
tgtgctccaatttacacgggagatcttccgcttcctaccaacacaccaacatcatcttct
gtaaagacaccaaccaacttaatttgcaccttcactcctgcaaagcagaaagttacttca
agcaccttatcgaaactagcgcttacttcaactacatccattcaacactgggttacaaag
actccaaattcatctccacctgtaagggaaacaaagacagtttctccacaaatagctgca
gcagatattcctgacactgcctttgcttccacctcaccacatctgaggtcagaaacacgt
gccaagagaaggttagaatccagtagggaagaaaatatgatgtgccttaaaagatgtaac
tgtatgactgaacatcacccagagtctaagaaatccagacaagaacagttcactttggca
gcaggttcaaagccttgtagaggagactaccttactcttaatggagaagtacagaatatt
caaagcttgaaagagcccttttctcctagtagtccttgttcttctgccacttgtctaaat
tatccacatcttaccaagacatcttgtgagaagatgattgacaaggagaatggttctact
gacagaagaagctggctgtctgatttgggaaataaactacggactaacaaaatgaataac
tatagtgggtcatcctcattacggaatccaagcataaaacgaatggaagctaggacagga
gctacatcaccagggcccattataactacaataacaatgaggaagatttgtacatacttc
gagcgaaagtcacaaaaaacctaa
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