Pituophis catenifer annectens (San Diego gophersnake): 139320471
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Entry
139320471 CDS
T11059
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139320471 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139320471 (NUP54)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139320471 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
TBCC_N
Motif
Other DBs
NCBI-GeneID:
139320471
NCBI-ProteinID:
XP_070804913
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MAFNFGAAAGAAAAPNPAGAFGGFGTSTTTPGSTFNFSTPTNTGLFGATQNKSFGFGTTF
GTAPTTGTGLGTGLGTGLGFGGFNTQQQQPTLGGLFSQPAQVPAQSNQLINTASALSAPT
LLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSCMPNNKDED
GLVALVFNKKETEIRGQQQQLVESLHKILGSNQTLTVNVEGVKTMPDDQTEIVIYVVERS
PNGTSRRVPATTLYAHFEQANIKNQLQQIGVTFSMARTELSPAQVKQLLQHPPAGVDPII
WEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQSRLDIISEDISELQKNQTTT
MAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFK
GRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIRQHLKQQQEGLSHLISIIKDDLEDT
KLIEHGLNESIPVRGGVFS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacttcggggcggctgctggcgccgcggccgccccaaaccccgcgggagct
tttgggggttttgggaccagcaccaccaccccggggtccaccttcaatttctcaactcct
acaaacacagggttgtttggagctacccagaacaaaagttttggtttcggtaccaccttt
ggaacggcaccgacgacaggaactgggcttggcaccggcttgggaaccggtttgggattt
ggtggtttcaacactcagcagcagcaaccaacacttggaggtcttttcagccagcctgct
caagtccctgcacagtccaaccaactgatcaacacagcaagcgcgctttccgcccccacc
ctcttgggagatgagcgagatgccattttggccaaatggaatcagctgcaggcattttgg
ggcacaggcaaagggtatttcaacaacaacattgccccggtggaatttacgcaggagaac
ccattctgcagatttaaggccgtgggctacagctgcatgcccaacaacaaggacgaagat
ggcttggtggcattagtcttcaataaaaaagaaacagagattcgtggtcagcagcagcaa
ctggtggaatcgttgcacaaaatcttgggttcaaaccagacgcttacagtcaacgtagaa
ggtgtaaagaccatgccagatgaccaaacagaaatagtgatctatgtggttgaacggtcg
cccaacgggacttccaggcgggttccagccaccaccctgtacgcgcacttcgaacaagcc
aacatcaaaaaccagttgcaacagattggcgtgaccttcagcatggccaggacggagctc
tctccagcacaggttaagcagctgctgcagcatcctcctgcaggtgttgatccaatcatt
tgggaacaagccaaggtggacaaccccgatcctgaaaagctgattccagtcccaatggtt
ggcttcaaggaactcttaaggaggttgaaagttcaagaccaaatgacaaagcagcatcaa
agccgactggacataatatcagaagatataagcgagcttcaaaaaaaccagacgacaacc
atggccaaaatcgctcagtacaagagaaagctaatggatctttcccatcgaactttgcag
gtgttaatcaagcaggagatccagaggaaaagcgggtatgccatccaagcggacgaggag
caactccgggtgcagctggatacgattcagtgcgaactcaacgcccctacccagttcaag
ggtcggttgaacgagctgatgtcacagatcagaatgcagaaccactttggagctgtcaga
tccgaagagagatactatatcgacgcagacctcttacgggaaatcagacagcatttgaag
cagcagcaagaaggactgagtcacctgatcagtattataaaagatgacctggaagacaca
aagctgatagaacatggcttgaatgagagcattccagttagagggggcgtcttcagttga
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