Pituophis catenifer annectens (San Diego gophersnake): 139320566
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Entry
139320566 CDS
T11059
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139320566 (LRBA)
Membrane trafficking [BR:
pcae04131
]
Endosome - Lysosome transport
Others
Others
139320566 (LRBA)
Endosome - Golgi transport
139320566 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
139320566 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139320566
NCBI-ProteinID:
XP_070805037
LinkDB
All DBs
Position
Unknown
AA seq
2851 aa
AA seq
DB search
MASEERQSSSSPSTGDDKGGGRGEGGGGTTGQGKDGSSAEKQSLNPGIPIRGIRMKFAVL
TGLVEVGEVSNRDIVETVFNLLVGGHFDLEMNFIIQEGEAITCMLDLLDKCDVTCQAEIW
SMFTAILKKSIRNLQICTEVGLIEHVLQRIDRADNMIADLLVDMLGVLASYSVTVRELKL
YFSKLQGDRGKWPLYAGKLLSVLKYMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGF
TFHTWLRMDPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLVVTSIKSKGKGFQHCVK
FDFKPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNVSDTFDKCFLGSSETA
DANRVFCGQMTAAYLFSEALNAAQIFAIYQLGLGYKGTFKFKGESDLFLADHHKQLLYDG
KLSNAIAFTYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVITHSIQSAMHSIG
GVQVLFPLFAQLDYRQYSLDQPDTTLCSILLAFIMELLKNSVAMQEQMLSCKGFLVIGYS
LEKSSKAHINRTVLDLCLAFAKYLSNLHNGAPLLKQLCDHILLNPVIWIYTPAKVQLMLY
TYLSTEFIGIANIYNAIRRVGTVLLAMHTLKYYYWVVNPQDRSGITPKGLDGPRPNQKDI
LSLRACLLMFIKQLVTKDYGVKEDELQGILNYLLTIHEDENLMDVLQLLVALMSEHPSSM
IPAFDQRNGLRVIYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEIMIGHGLFSLLIER
LTLQTNLISMTTYNVLFEILIEQICTQVMHKQHPDPDSAVKIQNPQVLKVIAVLLRNSPP
CSETMEVHRVFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPQSSDEQKITEMVY
AIFRILLYHAIKYEWGGWRVWVDTLAITHSKVTFEIHKQNLSRMFREYEEKGDECCSAGP
SSVIRTVSGISKDTEVTEKLHLLEKKEADTSIVDIDNRRMNNSVLKDESRLHDFEEHSNL
ETNKEKNKSENIQKTLDLNETPSLDLPLQAQVTKQSSEHTAEIIGINHEEKEISTSDSQS
PLENVETLESPEMLENVTPEGVEEDEDFVDLKEETNLALTSEQCVPKPIEENDLCDSQVT
SVVQQCTASSKEPVSIEVVPEIVEGSIVEGSIVEGSVETEQQDCLPEISGPEINRAQSTS
DTENNIDDKNTNQPQTKTVVDSTQPQTSEAIIVSDKKIARLDVSSIASDTERLELKPHAN
PEVNHPPRAISETSRQYDSSDQNVATPADGQRKDSRSTMFRIPEFRWSPMHQRLLTDLLF
SIETDVQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLVSQVMDNMIMACGGILPLLSAATS
ATHELESIEPTQGLSVEASIAFLQRLISLVDVLIFASSLGFTEIESEKNMSSGGILRQCL
RLVCAVAVRNCLECQQQHMLMKPSGENVKHQKTIQSLIASGRTGAKSPVDIVTGGISPIR
DIDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQDERRQF
QPSQSPKIVKEEQSEAITTLSQEPAEQSENVTSPQRRDSGIQEKAYSGSGHNSEMVTEPE
RQSISTGPDAISEILCTLSSEVNKSQENKNEVHNEVDGKTASSVQTAKNVNVKDILRSLV
SAPADGATVDPTVLPPVFLGVLGDGATAQPIQFQSFDRSVVVAPKKSVSSSAATINVPTN
AVSVVSSLDSSQAPDVTGGSPSNGSSDSRLPSVPTLSSVPEDSASNMSISERLEHALEKA
APLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQ
KNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDVHRHAEFESLCAQYSAE
KREDEKMCDHLIRAAKYRDHVTATQLIQKIINILMDKHGAWGNSPPSRSREFWRLDYWED
DLRRRRRFVHNPLGSTHPEATLKAAIDHAPDEDVLVKGKQSIKNQALGNQNSESEILLEV
DDDNLSSMEEKELENLTGPVSLCTPAQLVAPCVVVKGTLSITTSEVYFEVDEEEPSFKKM
DPKQILAYTDGLHGKWLFSEIRSVFSRRYLLQNTALEIFMANRVAVMFNFPDPATVKKVI
NCLPRVGIGTSFGLPQTRRISMATPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGRTY
NDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYETWEDDQVP
KFHYGTHYSTASFALTWLLRIEPFTTFFLNLQGGKFDHADRAFSSVSRAWRNCQRDTSDI
KELVPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVS
CQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGTVNLNSIMDPLLREAVEAQIRSFGQT
PSQVLIEPHPPRSSAMQLYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLA
NSAVITVTVNRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHKRQITDLLDQ
SIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLMQVVFGHWDVVTCLGRSESYIG
GNCYILSGSRDATLLLWYWNGKTSSIGDNTNGETAAPRAILTGHDYEITCAAICAELGVV
ISGSKEGPCLIHSMNGDLLRTLEAPENCVKAKLIQASREGHCVIYYDNGHFCVFSVNGKL
HSTMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVYDLKQLFAYPGCDAGIRSMTLSYD
QRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8556 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagaaaggcagagctcttcctcgccgtcaacgggggatgataaaggagga
ggccgcggcgaaggtggtggtggtactactgggcaaggaaaagatggaagctcagctgaa
aagcagtctttgaatccaggcatccctatccggggtatcaggatgaaatttgctgttctg
acaggattggtggaagttggggaagtatccaacagggatattgtagaaactgtgttcaat
ctgcttgtaggtggtcattttgatctggaaatgaattttattatacaagaaggagaagct
attacatgcatgttggacttgctggataagtgtgatgtcacttgccaggcagagatatgg
agcatgtttacagccatcctgaaaaaaagtatccgaaatctgcagatttgcacagaagta
ggtctcattgagcatgtgcttcagaggattgatagagctgacaatatgattgcagatctt
ttagtagatatgcttggagtattagcaagctacagtgtgacagttcgggaattaaagctg
tactttagcaaacttcaaggagacagaggaaaatggcctctgtatgctggaaagctgcta
tctgtgttaaaatatatgccccagaaatatgggcctgatgccttcttcaatttcccagga
aaaagtgctgcagctattgccttacctcctatagcaaagtggccataccagaatggattt
acctttcatacttggttaagaatggaccctgtaaataatatcaatgtagacaaagataag
ccttacttatattgttttagaacaagtaaagggcttggttactctgctcattttgtggga
ggctgtttggttgtgacatcaattaagtcaaaaggaaaaggtttccagcattgtgtgaaa
tttgatttcaagccgcaaaagtggtacatggttactattgttcatatctataatcgctgg
aagaacagtgaactcagatgttatgtgaatggagaactagcatcatatggagagataaca
tggtttgtcaatgtcagtgatacatttgacaaatgtttcctgggctcttcagaaacagca
gatgccaatcgagtgttttgtggccagatgacagctgcttatcttttcagtgaagctctc
aatgctgctcagatctttgcgatttatcaacttggtctgggatacaaaggaacttttaag
ttcaagggagaaagcgatctgttcctagctgatcatcataaacagttattatatgatggg
aaactgtctaatgctattgcctttacatacaacccaagggctacagatgcacagctctgc
ctagaatcatcacccaaggacaatccttctatctttgtacattcaccacatgccctcatg
ttacaggatgtgaaagcggtcataacccattctatccaaagtgcaatgcattctattgga
ggagtccaggtgttatttcctctatttgcacagttggactataggcaatattccttggat
cagcctgacacaactctttgttctattttactggctttcattatggagttgctgaagaac
tcagttgctatgcaagaacaaatgctttcttgtaagggcttccttgtaataggatacagt
cttgaaaagtcttccaaagcacacattaacagaactgtcttagacctttgccttgccttt
gctaaatatttgagcaatttgcataatggagcccctttgctgaaacagctctgtgatcat
attctccttaaccctgtaatatggatttatactccagccaaggttcaattgatgttgtac
acttacttgtccactgaattcattggcatagcaaatatatataatgcaattagacgagtt
ggcacagttctattggcaatgcataccttgaagtattactattgggtagttaatcctcaa
gaccgtagtggaattactcctaaaggtttagatggacctcgacctaatcagaaagatatt
ctttctctgcgagcctgtttattgatgtttattaagcagttggtgacaaaggactatgga
gtgaaagaagatgaactccagggcattctgaattatcttcttaccattcatgaggatgaa
aatttaatggatgttttgcaattgcttgttgctctcatgtctgagcacccaagttctatg
attcctgcttttgatcagaggaatggattacgtgttatctacaaacttcttgcttccaaa
agtgaaggaatcagagtacaagcactgaaagtgatgggctactttttaaagcatctggca
cccaagaggaaagcagaaattatgattggacatggactgttttctcttctgattgagagg
cttacgcttcaaacaaacttaatttccatgactacctacaatgtactttttgagatactt
attgagcagatttgtacacaagtaatgcataaacagcatcctgacccagattcagcagtg
aaaatacaaaatccccaggttctgaaagttattgctgttttactacgtaattccccaccg
tgctcagaaaccatggaagtccaccgagtcttcctatcagacatgattaagctttttaat
aacagcagggagaataggaggagtttactgcagtgttctgtgtggcaggaatggatgctt
tctctttgctattttaatccccaaagctctgatgaacagaagataacagaaatggtgtat
gccatttttcgaatactactttatcatgcaataaagtatgaatggggtggctggcgtgtt
tgggtggatactctagcaattacacattcaaaggtaacttttgaaatacataaacagaac
ctttctcggatgttcagggaatatgaagagaaaggagacgaatgctgcagtgctggtcca
tcatccgttattagaacagtttcaggtattagtaaagataccgaagttacagagaaactc
catcttcttgaaaaaaaagaagctgacacttctatagttgatattgacaacagacgcatg
aacaacagtgttttgaaagatgaaagtagattacatgattttgaagaacacagtaattta
gaaacaaacaaagaaaaaaacaaatcagaaaacattcagaaaactcttgatttaaatgaa
actcctagtttggatcttccccttcaagcccaagtgacaaaacagagctcagaacatact
gctgaaattattggaataaaccatgaagaaaaagaaataagtaccagtgattcacaatca
cctttagaaaatgttgaaacactagaaagtccagaaatgttagaaaatgtaacaccagaa
ggtgtggaggaagatgaagattttgttgatttaaaagaggagactaatctggcacttaca
tcagaacaatgtgttccaaaacccattgaggaaaatgatttgtgcgatagccaggtaacc
tccgttgtacagcagtgcactgcttcttcaaaagaacctgtttcaatagaagtagtacct
gaaattgttgaaggatcaattgttgaaggatcaattgttgaaggatcagtggaaacagaa
cagcaggattgcttgccagaaatcagcggtcctgaaataaacagagctcagtcaacttca
gacactgagaataacattgatgacaaaaatactaatcaaccccaaaccaagacagttgta
gatagcacacaaccacagacttcagaagcaataattgtttcagataagaaaattgccaga
cttgatgtttccagcattgcatcagatactgaaagattagaattaaaaccccatgcaaat
ccagaagtaaatcatcctcctagagccatttctgagacatctaggcaatatgattcatca
gatcaaaatgtagcaactcctgcagatgggcagaggaaggattctagatctaccatgttc
cgtatccctgaattccgatggtctccaatgcatcagcgcttgcttacagatcttctcttt
tctatagaaacagatgtacaaatgtggagaagtcattctaccaagactgtgatggacttc
gtgaacagcagtgataatgtcatctttgtacataacacaattcatcttgtctctcaagtg
atggacaatatgattatggcttgtggtggcatattacctttgctttcagctgctacatct
gctacgcatgaattagaaagcattgagccaactcaaggattatcagtggaagcttccata
gcattccttcaaaggttaattagccttgtggatgtattgatctttgcaagttcccttgga
tttactgaaattgagtcagagaaaaatatgtcatctggtggaattttacggcaatgtctt
cgacttgtatgtgcggtagccgtcagaaattgtttggagtgtcagcaacagcatatgtta
atgaagcctagtggagaaaatgttaagcatcagaaaacaatacaaagccttatagcctca
ggaaggactggagcaaagagtccagttgatattgtaaccggaggaatttctccaataaga
gatattgacagacttctacaggatatggatattaatcggctccgtgcagtggtattcaga
gatatagaggacagtaaacaggcacagttcttggctttggctgtagtgtattttatctct
gtactcatggtatcaaaatacagagatattttggaacctcaagatgaacggaggcaattt
caaccttctcagtcacccaaaatagttaaggaagaacaatctgaagctattactacttta
agtcaggaacctgccgagcagtcagaaaatgtgacgtctccacaaagaagggattctgga
attcaggagaaagcatattctggatcaggacacaattctgagatggttactgaaccagaa
agacagagtataagtacaggtccagatgcaatcagtgaaatactatgtactctttcttca
gaagttaataaatctcaagaaaataaaaatgaagtacataatgaggttgatggcaaaact
gcatcctctgtacaaactgcaaaaaacgtcaatgtgaaagacatcctaagaagtttggtc
agtgctcctgcagatggggccacggtggaccctactgttcttccacctgtttttcttgga
gtccttggtgatggtgccactgcacaaccaatacaattccaatcttttgacaggagtgtg
gttgtggcaccaaagaagtcagtgagttcatctgcagctacaattaacgtgcctacaaat
gctgttagtgtggtttcttctttggattcttcccaagctccagatgtaactggaggctct
ccaagcaatggatcatcagattcaagattaccatctgttcctacactttcttctgtgcct
gaggattctgcttcaaacatgagtatttcagagaggcttgagcatgctttggaaaaagct
gcccctcttctgagggagatatttgtggactttgctccttttctttcgcgtaccctcttg
ggtagtcatggtcaagaactactgatagaaggtacaagtcttgtatgtatgaaatctagc
agttcagttgtggaattggtcatgctgctttgttctcaggaatggcagaactcaatacag
aagaatgcaggcctagctttcattgaacttgtcaatgaaggaaggttgctgagtcaaaca
atgaaagatcatttagtgagggtagcaaatgaagcagaatttatcttgagtaggcagaga
gcggaagacgttcataggcatgctgaatttgagtcattgtgtgcccagtattctgcagaa
aaacgtgaagatgagaagatgtgtgatcatttgataagggcagccaagtatcgtgatcat
gtgacagcaactcagctaatacagaaaatcatcaatatactgatggacaagcatggagcc
tggggcaattctccgccaagtcgttctcgtgagttctggcgccttgactactgggaagat
gacttgcggcgccggcgacgatttgtgcataacccccttggatcgacacatcctgaagcg
acattaaaagctgccatagaccacgctccagatgaagatgtacttgttaaaggaaaacag
tctatcaagaatcaggctttaggaaatcagaattcagaaagtgagattctcctggaagtc
gatgatgataatttgtcatccatggaggagaaagaacttgagaatttaactggtcctgtt
agtctatgtacaccagcccagctcgtggccccttgtgtagtagtgaaaggcactctgtcc
atcaccacctctgaagtgtattttgaggtagatgaagaagaacccagttttaagaaaatg
gatcccaagcagatacttgcatacacggatggactgcatgggaaatggttgttttcagag
attcgatcagtattttctcgacgctatctattgcaaaacacagcattggaaatctttatg
gctaatagagttgctgtcatgttcaactttccggatcctgcaactgtaaaaaaagtaatc
aattgtttacctcgtgttggaattggaactagtttcggattgcctcaaaccagacgtatt
tctatggccactccacgtcaaatctttaaagcttcaaatatgactcagcgatggcaacac
agagagatttcaaacttcgaatatcttatgtttcttaataccattgcagggcgtacatac
aatgatttaaaccagtatccagtatttccttgggtgatcactaactatgaatcagaagag
ttggaccttacacttccgagtaatttccgagatttgtcaaagcctattggtgctcttaat
cccaaacgagctgcattctttgcagaacgctacgaaacatgggaagatgatcaagttcca
aagtttcattatggcactcattattcaaccgccagttttgcactcacttggttgttaaga
attgagccttttacaacatttttcctaaacttgcaaggtggaaagtttgatcatgcagat
agagctttctcatcagtttcaagggcatggcgcaattgtcaacgtgacacatctgatatc
aaggagcttgttcctgaattttattatctacctgagatgtttgtcaatttcaataattac
aatcttggagtgatggatgatggaacagtggtgtctgatgttgaacttccaccatgggct
aaaaccccagaagaatttgttcgcataaatagactggctttggaaagtgaatttgtttcc
tgtcaactgcaccagtggattgatttgatttttggctataagcagcaagggccagaagct
gtcagatctctaaacgttttctactatctgacctatgaaggaactgtcaatctcaattca
ataatggatccattgttgagggaggcagtggaagctcagatcagaagttttggacagact
ccttcccaagtacttatagaaccacatcctccaagaagttctgctatgcagttgtatctc
cttctccagagtccgttgatgttcacagaccaagctcaacaggatgtcatcatggtccta
aaatttccatccaactctcctgtaacacatgtagcagccaatactcagcctggcttggca
aattctgccgtgattactgtcactgtcaaccgactatttgctgtgaataagtggcacaat
cttcctgctcatcaaggtgctgtacaagaccagccataccagctgccagtggaaatcgat
cctctcatagctagcaatacaggtatgcacaaaaggcaaatcacagatcttctggaccaa
agtattcaagtccattcccagtgctttgttatcacatcagataatcgctacatcctggtc
tgtggattttgggataaaagttttcgggtgtattctactgatacaggaaaactaatgcaa
gttgtgtttggacactgggatgttgttacctgccttggccgctctgaatcttatattgga
ggaaactgttatattctatcagggtctcgcgatgccactctgctgctatggtactggaat
ggtaaaaccagtagcattggtgataacacaaatggtgaaactgctgctcctcgggcaatc
ttgactggacatgattatgagattacctgtgcagcaatttgtgctgaacttggtgtagtg
ataagtggttctaaagaaggaccatgtctcatacattctatgaatggggatctactgagg
acattagaagctcctgaaaactgtgtgaaagcaaaacttatccaagcatcaagagagggt
cactgtgttatatactatgacaatggtcatttctgtgtattcagtgtgaatggaaaactc
cactccactatggaaacagatgataatatcagggcaatccaactgagccgtgatgggcag
tatctcctcacaggaggagacaatggagttgttatggtatggcaagtgtatgatctcaag
cagctttttgcctatcctggttgtgatgctggaatccgatccatgactctttcatatgac
caaaggtgtataatgacaggcatggcttctggcagcatagtggttttctacaatgatttc
aacaggtggcatcatgaataccaaaccagatactga
DBGET
integrated database retrieval system
