Pituophis catenifer annectens (San Diego gophersnake): 139320661
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Entry
139320661 CDS
T11059
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139320661 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139320661 (FIP1L1)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139320661 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
139320661
NCBI-ProteinID:
XP_070805184
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MSASGEVERLAAELSGAGAGDEEEWLYGDENEEERPEEAPVRVPTPTGNEEEGAAENGVV
KMKVTEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYGYGAAPVNLNIKTGGRSYGSSGTK
VKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRI
RMGLEILPVTAATNKITAEDIAMEVTPGTEIPDGTYSLFKVQQGRTGNMEKEVALPPVKT
EFTSPPPLFKTGVPSNRNSASSQSQTGTAVRKTSSGAVKWQARYGRSESPELRRLSGTID
VIGQTITISRVEGRRRANENSNIQVLSERSSSDVDNNFSKPPPFFPPGAPPTHLPPPPFL
PPPPSVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIESGHSSGYDSRSARAFPY
GGVTFPHLTGSAPSWPSLMDTTKQWDYYSRRDKDRERERDRDRERDRDRDRERERTRERE
REREHSPTASVFNSDEEQRYRYREYAERGYERHRTSREKEERHRERRHREKEETRHKSSR
SNSRRRHDSEEGESHRRHKHKKSKKSKEGKEMGGGEPASEQENTEAAPAE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgagcggtgaggtggagcgactggcggccgagctgagcggggccggtgccggc
gacgaggaggagtggctctatggcgatgaaaatgaagaagaaaggccagaggaagcacct
gttagggttccaaccccaacgggaaatgaagaagaaggagcagctgaaaatggcgtagtg
aaaatgaaagtgacagaggctgaagatgacagtgacagtgatagtgacgatgatgaagat
gatgttcaagtcactattggtgatattaaaacaggagcaccgcagtatgggtatggagca
gcaccagtgaatctcaatattaaaacaggagggcggagttatggatcctctggcaccaaa
gtgaaaggagttgatcttgatgcaccaggaagcattaatggtgttccactattagaagtt
gatttggattcttttgaagataaaccttggagaaagccaggcgctgatctctcagattat
ttcaattatgggtttaatgaagacacttggaaagcctactgtgaaaaacaaaagaggata
cgaatggggctcgaaattttacccgttaccgcagctacaaataaaattacggccgaagac
attgctatggaagtaacgccagggacagagattccagatggcacatacagtctttttaag
gtgcagcagggcagaactggaaatatggagaaagaagtagcacttccaccggtcaaaact
gagtttacatctcccccacccctattcaagacaggagtcccgtcaaacagaaacagcgcc
tcttctcagtcgcagacaggcactgcagtcaggaaaaccagttcaggcgcggtgaagtgg
caggctcgatatgggaggtctgagtcacctgaactaaggcggctttccgggacaatagat
gtgattggacagaccatcaccatcagccgagtagagggaaggcggcgtgccaatgagaat
agcaatattcaggttctttctgaacgctccagcagtgatgtagacaacaatttttccaag
ccgcctccgttttttcctccaggagctccgcccacccatcttcctccacctccattcctt
ccaccgcctccatcagttagtactgctcctcctctaattcctcctccaggtataccaata
actgtgccaccgccaggctttcctcccccacctggaggaccaccaccttcccttatacca
actatagaaagtggacattcctctggttatgatagtcgctccgctcgtgcatttccatac
ggtggtgtcacctttccgcaccttacaggttctgccccatcatggcctagtctcatggac
acgaccaaacagtgggattattattccagaagagataaagaccgagagcgtgaaagagat
cgagatcgagaacgggatcgagatcgtgacagagagcgggagcggacccgagaaagggag
cgggagcgggagcacagtccgaccgcaagtgtgttcaatagtgatgaggagcagagatac
agatacagagaatatgcagagagaggctatgaacgacataggacaagtcgagagaaagaa
gagcggcaccgagaaaggagacaccgagagaaagaagagacgagacacaaatcgtcacgg
agtaacagccggcgccgccatgatagtgaagaaggagagagccacaggaggcataaacat
aaaaagtcaaaaaagagcaaagaaggaaaagaaatgggtggtggcgaacctgcctccgaa
caggaaaacactgaagctgcccctgcagaatag
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