Pituophis catenifer annectens (San Diego gophersnake): 139320679
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Entry
139320679 CDS
T11059
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04080
Neuroactive ligand-receptor interaction
pcae04082
Neuroactive ligand signaling
pcae04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139320679
04082 Neuroactive ligand signaling
139320679
04519 Cadherin signaling
139320679
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139320679
Ion channels [BR:
pcae04040
]
Ligand-gated channels
GABA-A
139320679
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
139320679
NCBI-ProteinID:
XP_070805213
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MVSAKEPTIAMFSGLSIIFVHFLCWATCVTALPGQLRKEEKLWPENFTRILDRLLDGYDN
RLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYDGPIEILRLNN
LMVNKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPM
DGHACPLKFGSYAYPKSEMIYTWTKGPKNSVEVPEESSSLVQYDLLGHTASTDTIKSITG
EYVVMTVHFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTT
LSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQIEKAKRKGVKSIPE
CSAAPVQKEISTVHPESPLLNTNSNSNVRKRTNTIVQPDLETAKRIDPGNNSLPSSSLTQ
GPLDIMPRSPSASSPNPFSRINISETLASARATPSAPPSTPVLTGYIAQQDTMESPAIHH
LLGSRLKEIQTTTNALGVPTKSPCLSSPPAPSACSSGTSKIDKYARILFPVTFGAFNMVY
WVVYLSKDTMEKTKNLM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaaggagccaacgatcgctatgttttcgggtctgtcgatcatctttgta
cacttcctgtgctgggcgacctgtgtcaccgcgctcccgggacagctcagaaaggaagag
aaattatggccggagaattttacacgcatcctggaccgcctcttggatggctatgacaac
aggctgcgtcctggatttgggggtcctgttactgaagtcaaaacagatatctatgtcaca
agttttggacctgtttctgatgtagaaatggaatatacaatggatgttttctttcgtcag
acatgggtggacaagagattaaaatatgatggtcccattgaaattctaagattaaacaac
ttgatggttaacaaagtgtggaccccagatactttctttcggaatggaaaaaaatctgtg
tctcataatatgacagctccaaataaactatttagaattatgagaaatggcaccattctc
tatacaatgaggctcaccataagtgctgagtgtcccatgagattggtggatttcccaatg
gatggacatgcctgtccgctaaaatttggaagctatgcatatccaaagagtgaaatgatc
tacacctggacaaaagggccaaaaaattcagtggaagtccctgaagagtcttctagttta
gttcaatatgacctacttggacatacagcatctactgacacaattaaatctatcacaggt
gaatatgtggtcatgacagtacacttccatctccgaaggaaaatgggatattttatgata
cagacatatattccgtgcatcatgactgtgatcctctcccaggtgtcattctggattaat
aaagaatctgttcctgccagaactgtttttggaataaccactgtgttgaccatgacaact
ttgagcatcagcgccaggcattccttacctaaggtctcctatgccacagccatggattgg
ttcatagctgtatgctttgcctttgtattctctgcactgattgaatttgcggctgtcaac
tattttacgaacattcagatagaaaaagccaaaaggaagggggtgaaatccatccctgaa
tgttcagcggcacctgtacagaaggaaatttcaacggttcatccagaaagccccctatta
aacacaaattcaaattcaaatgtgaggaaaagaacaaacaccatagtacaaccagatttg
gagactgctaaaagaattgacccaggaaacaattcattgccttcttcttcattaactcag
gggcccttggacattatgccccgatcgccttcagcttcaagtccaaacccattcagccga
attaatatatcagaaacactggcttctgcaagagcaactccttcagctcctccatccacc
ccagttttaacaggttatattgcccagcaggacaccatggaatccccggctattcatcat
ttacttggatctagactgaaagagattcagactaccacaaatgctttgggagtgcccaca
aaatccccgtgcctcagttctcctcctgctccatcagcctgcagctctggcaccagtaag
atagacaaatatgcacgcattttgtttcctgtcacttttggagcatttaatatggtctac
tgggtagtttatctttccaaggacaccatggaaaaaacaaaaaatctaatgtag
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