Pituophis catenifer annectens (San Diego gophersnake): 139320755
Help
Entry
139320755 CDS
T11059
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139320755 (SMARCAD1)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139320755 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
CUE
HHH_3
HTH_70
Motif
Other DBs
NCBI-GeneID:
139320755
NCBI-ProteinID:
XP_070805292
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MNLFNLDRFRFEKKANVEGQNAPSSDSPEDQKEPTAFSTVRKNSTIPSPSEDHAITVGGE
DDDDHTSGPTSPASDVSEETDDSSIPETPESKRTGLSKYFKSKKDVIELSSDSEDEEEVR
GKCKNTKQSSVSRRDVIIISEPSDDESENESSQSLHRNSPAEMSESTEEEEEEDLNYCKL
QTLKELFPQKSDQALLELIKSTNTMDEAIAAGLKLFDEGGSRKRKIEEGAMNDSEDKDDQ
SAKKKRLDPLQNPENEGEKHEHLVSKLHKEFPSLHKEELRDVLQEHNWIYQEALDSLKAF
MEDQEDAPSKSEVSNGKSVSVNNAAPHKKDTNTKPKEKSSKTSENGFRKKEKKKKIWSTK
KDSQEVQYESASEAGSSLDEDYSSGDEVMEDGYRAKILSFLQHASLSELTLIPQCSQKKA
QRIMELRPFNSWETLFTKMCRTNGLSEDIIWNCKTLLRERDVVLRLMNKCEEISNKLTKQ
VTKITGDGGGGWNIAQPSILNPSMELKPYQKIGLNWLALLHKHSLNGILADEMGLGKTIQ
AIAFLAYLYQVGDVGPHLIVVPASTIDNWIREVNLWCPELQILFYYGSQEDRRHLRMDIH
NKVTDFNVIVTTYNCAISSPEDRSLFRKMKLNYAIFDEGHMLKNMGSVRYQHLMTINAKN
RLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRIFSSKAKASEEHSIYEKERITHA
KQIIKPFILRRIKEEVLQQLPPKKDIVEWCEMTEKQGKLYQDLFSCLKKSIDGQEKNSEM
GNVMMQLRKMANHPLLHRQYYTSEKLRVMSKLMLKEPTHCEANPDLIFEDMCVMTDYELH
LLCKQYANIHDFKLEMDLIWDSGKFRTLIRILSDFKEKGDRVVLFSQFTMMLDILEVLLK
HEQHRYLRLDGKTQISDRIHLIDEFNSDMDIFVFLLSTKAGGLGINLTSANVVILHDIDC
NPYNDKQAEDRCHRVGQTREVQVIRLISKGTIEESMLKISQQKLKLEQDMTATETGEEGA
IPADIATLLKTSLGL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtttaatctggaccgctttcgctttgagaagaaggccaacgttgaaggacaa
aatgctccatcttcagattctcctgaagatcagaaagagcccactgctttcagtactgta
agaaagaattctacaattccttctccttcagaagatcatgctattactgttggtggagaa
gatgatgatgatcatactagtggaccaacctctccagcatctgatgtgtctgaggaaacc
gatgactccagtattccagaaactcctgaatccaagaggacagggctatcaaagtatttt
aaatctaagaaagatgttattgaattgtcatctgacagtgaagatgaagaagaagtacga
gggaaatgcaaaaatacaaagcaatcctcagtttctagaagggatgttattataatttct
gaaccttctgatgatgaaagtgagaatgaatcatcacaatctctccatagaaatagtcca
gctgaaatgtcagaatccacagaggaagaggaggaggaggatctgaattattgtaaactc
caaacactaaaagaacttttcccacaaaaaagtgaccaagcattattagagctcataaaa
tcaacgaatactatggatgaagctatagctgctggtctaaaattgtttgatgaaggagga
tctcgaaagagaaagattgaagaaggtgcaatgaatgattctgaagataaggatgaccaa
agtgcaaaaaagaaaagacttgatcctttgcaaaatcctgaaaacgagggggaaaagcat
gaacatctagtaagcaaattgcacaaagaatttccaagtttacataaagaggaactgaga
gatgtacttcaggaacataactggatatatcaagaagctttggattctttaaaagcattt
atggaagatcaagaggatgcaccttcaaagagtgaagtttcaaatggaaagagcgtctca
gttaataatgccgctccccacaagaaagataccaatacgaagccgaaagagaaatcatcc
aaaacctctgagaatggcttcaggaaaaaggaaaaaaagaagaaaatttggagtactaaa
aaggactcccaggaagtgcaatacgaatctgcttcggaagccggtagctcccttgatgag
gactatagcagtggtgacgaagtgatggaagatggttatcgagctaaaattcttagtttt
cttcaacatgcttctcttagtgaactcactttgattccacagtgttctcagaaaaaggct
caaagaataatggagctccgtccctttaatagctgggaaactttgttcacaaaaatgtgt
aggaccaatggcttgtcggaagatattatttggaattgcaaaacactactaagagaaaga
gatgttgtgctaagacttatgaacaaatgtgaagagatctcaaataaactgaccaaacaa
gtaacaaaaataactggagatggaggtggtggatggaacattgcccaaccatccatccta
aatccaagcatggaacttaagccatatcagaagattggtttaaattggctagcacttttg
cataagcactcactgaatggtattttagctgatgaaatgggtttaggaaaaaccattcaa
gcaattgcttttctggcatatctttatcaagtcggtgatgtaggtccacatttgatcgtt
gtgccagcatcaacaatagataattggataagggaagttaacctgtggtgtccagaactc
cagattttattttattacggatctcaagaagacaggaggcatctcagaatggatatccat
aataaagtaacagatttcaatgtgatcgtgacaacgtataactgtgcaattagtagtcca
gaagatcgtagcctgtttcgcaagatgaaacttaattatgcaatttttgatgaaggtcat
atgctaaaaaatatgggttctgtacgctatcagcatctgatgacaattaatgcaaaaaat
cgtttgctgctaactgggactcctgttcaaaataatcttttagaacttatgtccctattg
aattttgtaatgccacacatgttcagtagtagcaccagtgaaattcggaggatattttct
tctaaagcaaaagcatctgaggagcatagcatttatgaaaaggagagaattacacatgca
aagcagataataaaaccattcatcttgagaagaataaaagaagaggtgctgcagcaacta
cctcccaaaaaagacattgttgagtggtgtgagatgactgagaaacagggaaaactatac
caagatctttttagctgccttaagaaatctattgatggtcaagaaaaaaattctgaaatg
ggtaatgtcatgatgcaactaagaaaaatggctaatcatcctctcctacaccgccagtat
tatacctctgaaaaacttagagtcatgtcaaaactcatgctcaaggagcctacacactgt
gaagcaaaccctgatcttatttttgaagatatgtgcgtgatgactgattatgaactgcat
ttgctttgtaaacagtatgcaaatattcatgacttcaaacttgaaatggatctaatttgg
gattctggaaaatttaggacacttatacgcattttatcggattttaaagaaaagggtgac
agagttgtcttgtttagccaatttaccatgatgctggacatcttggaagttctcctgaaa
catgagcaacatcgctatcttagactggatggaaagacacagatctccgataggatacat
ttgatagatgaattcaattcagatatggatatctttgttttcttgctttcaactaaagct
gggggccttgggattaatttgacttcagccaacgtggtcattctccatgatattgactgc
aatccttacaatgacaaacaggctgaagacagatgccacagagttggacagactagagaa
gtgcaggtcattaggcttataagtaaagggaccatagaagaatccatgctcaaaatcagt
cagcagaagttaaaattagaacaagatatgacagcaacagaaacaggagaagaaggagcc
attccagcagatatagcaacactattaaaaacctcattaggtctctaa
DBGET
integrated database retrieval system
