Pituophis catenifer annectens (San Diego gophersnake): 139320803
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Entry
139320803 CDS
T11059
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139320803 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139320803 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139320803 (SUPT5H)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
139320803 (SUPT5H)
RNA polymerase I system
139320803 (SUPT5H)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
139320803 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW5_SPT5
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
Arabino_trans_N
DUF3912
Motif
Other DBs
NCBI-GeneID:
139320803
NCBI-ProteinID:
XP_070805334
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MSDSEDSNFSEDESERSSEPEEVEENEAEERASVVGSEKEEAEEEEEEEEEEYDEEEDED
DDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGA
RRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTV
KCKIGEERSTAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGV
GNLRMGYWNQQMVPIKEMTDVLKVVKEMTNLKPKSWVRLKRGIYKSDIAQVDYVEPSQNQ
ISLKMIPRIDFDRIKARMSQKDWVAKWKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFE
GNRYSRKGFLFKSFAMMAVITDGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQP
GDNVEVCEGELINLQGKILSVDGNKITIMPRHEDLKDMLEFPAQELRKYFKMGDHVKVIA
GRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHELGELVLL
DPQTVGVIVRLERETFQVLSMNNQLVTVRHQAVNRKKDNRFAVSLDSEQNNIHVKDIVKV
IEGSHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTKHLILAGGSKPRDVTNVTAGGF
VPMSPRMNSPMHPSSGGPRGGFGGGGMNRGRGRRDNDLIGQTVRISRGSYKGYIGMVKDA
TESTARVELHSTCQTISVDREHLTIVDSKKPSGMPSGYGRTPMYGSQTPMYGSGSRTPMY
GTQHDGNRTPHYGSQTPLHDGSRTPAQSGAWDPNTPSRPEEEFDYGFDDEPTPSPQGYGG
TPNPQTPGYPDPSSPQVNPLYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQSFHQ
VAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGCSPMTPGAPSPGGYNPHTPGSGIE
QSSSDWVTTDIEVKVHDTYLDSHVVGKTGVIRSVNGGMCSVYVKKCEKVVSISSEHLEPV
TPAKNDKVKILLGEDREGTGMLLSIDGDDGIVRMNPEEQLKILNLRFLGKLVEA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagtgaagacagcaacttctccgaagatgagagcgagcgtagcagcgagcct
gaggaggtggaggagaacgaggcagaagagcgggccagcgtcgtaggaagcgagaaagaa
gaagcggaggaggaagaggaggaggaagaggaagaatacgacgaggaggaagacgaagat
gatgatcggcctgcaaagaaacccagacatggaggctttattttggacgaagctgatgtt
gatgatgagtatgaagacgaagatcagtgggaggacggagcagaggacatcctggaaaaa
gaagaaatcgaagcctccaacattgacaatgtggtgctggacgaagaccgttccggagcc
cggagactgcagaacttgtggagggaccaaagagaagaagagctgggcgagtattacatg
aagaaatatgccaagtcttccgtgggcgagactgtgtatggcggctccgacgagctttct
gatgacattacacaacagcagctgcttccgggagtcaaggaccccaatctttggacggtg
aaatgtaagattggagaggagcgttccaccgcgattgccctgatgaggaagttcatcgcc
taccagtttacggacacacccttgcagatcaaatcggtggtggctcctgagcacgtgaag
ggctacatctacgtggaggcttacaagcagacccacgtcaagcaggccatcgaaggggtg
ggcaacctccggatgggctactggaaccagcagatggtgcccatcaaggagatgaccgac
gtcctgaaggtggtgaaagagatgaccaacctcaagcccaaatcttgggtgcgactcaag
aggggaatctacaaaagcgacatcgctcaggtggattacgtggagccgagccagaatcag
atctcgctcaaaatgattccgcgcatcgatttcgatcgcatcaaagctcgaatgagccag
aaagattgggtggcgaaatggaagaaattcaagcgtcccccacaacggctcttcgatgcg
gaaaagatccgatctttgggcggtgacgtggcctccgatggggatttcctgatcttcgaa
gggaatcgctacagccggaaagggttcctcttcaagagcttcgccatgatggctgtgatc
accgatggagtgaagcccactttgtccgagctggagaaatttgaggaccagcctgaaggg
atcgacttggaggtggtgaccgagagcacagggaaggaacgagaacacaacttccagccg
ggagacaacgtggaggtgtgcgaaggggagttgatcaacctgcaggggaagatcctgagc
gtggacgggaataagatcaccatcatgcccaggcacgaagacctcaaggatatgctggag
ttcccagctcaggagctgcgcaaatacttcaaaatgggagatcacgtgaaggtcatcgcc
gggcgctttgagggcgacacggggttgattgtccgtgtggaggagaacttcgtcatcctt
ttctctgacctgacgatgcacgagctcaaagttctcccccgagaccttcaactctgctcc
gagacggcctctggtgtggacgtggggggccagcacgagcttggagaactagtgttgctg
gatccccagaccgtcggggtcatcgtgcgtctcgaacgggagaccttccaggtcctgagc
atgaacaaccaactggtaactgtgcggcaccaggcggtgaatcggaagaaggacaatcgc
ttcgcggtctccctggactcggagcagaacaacatccacgtaaaggacattgtgaaggtc
atcgaaggttctcattcgggccgcgagggggagattcggcacctcttccggggctttgct
ttcctgcactgtaagaagctggtggagaacggagggatgttcgtctgcaagacgaagcat
ttgattctggcggggggctccaagccccgggatgtcaccaacgtcacggctggtggcttc
gtgcccatgagtccacggatgaacagccctatgcatcccagctctggagggccacggggc
ggctttggcggtggcggaatgaaccgaggccgtgggcgcagggataacgacctcattgga
cagacggtgcggatttcccgagggtcttacaaaggctacatcggtatggtcaaggatgcc
acggaatccaccgccagggtagagctgcactccacatgccagaccatctcagtggatcgg
gaacatctgacgatcgtagattccaaaaagccatctggcatgccctctggctatggacgg
acccccatgtatggatcccagacacctatgtatggctcgggctcccgcacacccatgtat
gggacccagcatgatggaaaccggacgccgcactacggctcccaaacacccttacatgat
ggcagccggacacctgcccagagcggcgcctgggatcccaacaccccttcaaggccagag
gaagaatttgactatggtttcgacgacgagcccacgccttctccccaaggctatggagga
acccccaacccacagactccaggctatccagacccttcttccccgcaggttaatcctctg
tacaaccctcagacgcccggaaccccagccatgtataacaccgaccagttctctccgtac
gccgtcccgtctcctcagggctcctaccaaccgagtcccagccctcaaagtttccaccaa
gtggcacccagccctgtgggctaccagaacacccactcacctgccagctaccacccgact
ccttcgccaatggcttaccaggctagccccagccccagcccagtgggctgtagccctatg
accccgggggctccttccccaggaggttacaaccctcacacccctggctctgggattgag
cagagctccagcgactgggtcaccaccgatatcgaggtcaaagtgcacgacacgtacctg
gacagccatgtggtggggaagaccggagtcatccgtagcgtgaatggtgggatgtgttcg
gtctacgttaagaaatgtgaaaaggtagtcagcatttcaagcgaacacctggaacctgtg
acaccagccaagaacgataaggtcaaaatcctcttgggagaagaccgcgaagggacggga
atgttgctgagcattgatggggacgacggcatcgtccgcatgaacccagaagagcagctc
aaaattctcaacttgcgtttcctgggcaaactcgtagaagcttag
DBGET
integrated database retrieval system
