Pituophis catenifer annectens (San Diego gophersnake): 139320924
Help
Entry
139320924 CDS
T11059
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139320924 (CIC)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139320924 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139320924
NCBI-ProteinID:
XP_070805543
LinkDB
All DBs
Position
Unknown
AA seq
2501 aa
AA seq
DB search
MKPVRKAASSSSSSSSGSSSCSRSPPSTRAKTQKRKTAIDENPALEEGAEEEAPDQPPAF
VGARRMQVQMDPSLRDLAGAHDDPYKLSEGETQAGAEACGTEASLNRKTATFKSRAPCRK
YPGGEESNGSENVAATLADEPRRCPSSSTDTASEHSADENDKGVGNMWATPPSAYDLRQL
RSQRVLARRDGLFQPAIVKQVRRGQDLGVQFVGDRVTAYYEGALGSAAVDIVLDATPPPG
ALAVGTAVCACMDPEETTYQEGMVVEVSVKPASYKVRFTNPVVLPGTASASRKDSAWVPR
LALRLLRSPWHCDNPSEDNKPPEAMPPLPEPEEVALALSCPESKQPEDAEVSKISAGVRA
EEKSVAVPPQILSPPKSPAFPRLPEQRSPLLSPEASGSRSSSVMSVDKCSTPGSSRSRTP
LTAAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEME
SLSEGRASGLREGSAEFDWDETSRDSEASSARGDSRPRLVAPADLSRFEFDECEAAVMLV
SLGSSRSGTPSFSPVSNQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRAAARSRHVS
ASTPKGVGGAVLSPEMLHHATSRERHHSGISFQTNLTFTVPMSPSKRKAESHHSSTSSAA
DFHKNDSLDSGVESISHTPTPSTPAGFRAVSPAGAGPFSSRSQQASPLLLVPPPAGLTSD
PSPTVRRVPAVQRDSPVIVRNPDVPLPSKFTEKPLESRGGSPRMGKAGSKEHLSGKGQLQ
MPVPINVGRTLPSSQPSVVTVPEQAPPVFSVSSPFQPVAFHPSPAALLPLLVPGEYTGHP
TPKKEIIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDSSVQPSEGQQPVSHPSTSN
QNKEPPESAAVAHELPGLSSEADSAGRPTPSHPDSPTPVAQPSTVIPGGSGVPSQHDDDL
SGHPRLDSETESDHDDAFLSISSSEISIPLLPGKRRTQSLSALPKERDSSSEKDGRSPNK
REKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAF
QVKEAHFKAHPDWKWCNKDRKKSSSDIKSAGPGGCPKEMRERSMSETVASEMLLGPDVKA
GVMGSGHCHGERILPSASDAQRPRAFSHSGVHGMDSDRDNQVLQELTQICSGQSPYASGK
GQYGGLGPSGSPFATPGEGPRHSLHPHSSRASRSQRTTSEDMTSDEERMVICEEEGDDDV
IAEDGFNPADVDLKCKERVTDSDSEGSLGDESDSKDFGRKLFAPVIRSAALPPSSAAFAP
CRPPPPLDLEPPPPPPPLPPPHSHQEQPPSKPYSSFQMSPSTFKSQDSHSALRPHNTPTK
RLEARFDPAAAPYRRKRADSAGGSQGPSEAGTAPLSVPAHSVISPPSGAVQTLVLPDSTR
LSTGTVLVTAPSLSTPNMGVIGYSGSPSFVRTASTVVTNVVKPVSSTPVPIASKPFLRGT
GDALPLVSPPPSDGNAKPEGISVSRLGLLYADKKVPQTSAMAGIQATSPHLVAGPLLGQG
LAAVGKCPPTQGSVVTNLLVGTQGYSQASGAGGAGVPVTVLPPGAIAQQPSVQFITQNPP
GQNGPVPLSILQPQGIFSGTAGKAGSITQVQYILPTLPQQLQVAGGKIPAAAGTPAAASI
HFTLPPPNGKVITAPQGIPIIQPAPGSNSNSVTVMSSAPKVQSVSPVQAPSPSNSAHLVT
GQVMPPAGLQVQGKVLVPMAASQVTVRTTSAAQLPLVTPPFTVPVQNGSQPASKIIQLTP
VPVVQPQSSSQSSATLVPPLSPAALQGTMATAVIGSPSQAQKVLLPSSSTRITYVQSAAG
HALSLGTSTSHSQPSIPPAAPTTTYVQSPVGPAPMALGFTAIGPLLSGQNPVLASGQVGV
SPLQSPQLPVSGAGQGQVITAVYPTPTGTSPVQSASHSVVYSVAATGTTTVSSPTAILPK
GGSASQSAGSSNHSLISTAAQVIPSTPTRPQRPPLKPPQKVKATIANIPVGSYEAVYSPG
PVPPPAGQQHDSGAARYHRETETLERPSRETGPQDTPSSPACHGAADKSPAKAQELKRDC
WEPISPPASQPSQVTETPAAEVVWSQQEMAAGPSEEGAVREPPPSSLLGSKGTEMAPKFP
SSPDWRTAGPEARPEASASSAAPNSSSSLSPIPSNAGEGSRSSASTLPPVAAAPTADGLD
PKESPGGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFKPEEVLPSPTLQSLAT
SPRAILGSYRKKRKNSTDLDSSTEDPISPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDK
TGTDTDDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYSDIF
PTKVCLQLKIREVRQKIMQAATPTEQAPSTPEPGGAPGSVMGVSGAEGQLAELSLPQDSA
QSTEAAPPAASPSTTAAGWDCSQQSSPGTAGSSTSTATTTR
NT seq
7506 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagtgagaaaggctgccagttcctcctcttcctcctcttccggtagcagcagc
tgcagccgctctccaccctccacccgggccaaaactcagaagcgcaagaccgccattgac
gagaaccccgcgcttgaagaaggagcagaagaggaggcgcccgatcaacccccagcattt
gtgggtgcccggcgcatgcaagtacagatggaccccagcttgcgggacttggccggagct
cacgatgacccctacaaactgtccgaaggcgaaacacaggcgggggccgaggcctgcggg
acagaagcctccttgaaccgcaagacggctacttttaagtcgcgggcgccatgccggaag
taccctgggggtgaagaatcaaacggcagcgagaacgtagccgccaccttggcggatgag
cctcggcgctgcccttcttctagcacggacacagccagtgagcactccgcagacgagaac
gacaagggggtggggaacatgtgggcaacgccccccagtgcgtacgacctgcgccagctg
cgttcccagcgggtgctggctcggcgggacggactcttccagccggccatcgtgaagcag
gtcagacgagggcaggacttgggggtacaatttgtgggggaccgggttacagcatattac
gaaggggccctgggatctgctgctgtggatattgtgctggacgctacccctccccctgga
gctttggctgtgggtaccgcagtctgtgcttgtatggaccccgaggagaccacttaccag
gaaggcatggtggtggaagtcagcgtcaaacctgcttcctacaaagtgcgattcaccaat
ccggtggttctccctggaactgccagtgccagccgcaaagactccgcctgggtgccccgc
ttggccctgcgccttctgcgctccccatggcattgtgacaatccttctgaagacaacaag
ccacccgaagcaatgcctccgttgccagagccagaggaagttgctctggccctctcgtgc
cccgagtccaagcagcccgaagacgccgaagtatccaagatcagtgctggggtgcgggca
gaggagaagtccgtggcggtgccaccccagatcctgtccccccccaagtcgccagccttc
cctcgccttcctgagcagcgatcgcctttgctgagtccggaagcgagcggaagccgcagc
agcagcgtgatgtccgtggataagtgcagcacaccgggatcctctcgctcccgtacgccc
ctcactgccgcccagcagaagtacaagaaaggagacgtagtgtgtacccccaatggcatc
cgcaagaagttcaacgggaagcagtggcggcgactctgctcacgggatggctgcatgaag
gagtctcaacggcggggttactgctcgcgtcatctctccatgcgcaccaaggaaatggaa
agcctctcggaaggccgggccagtggtttgcgggagggcagcgccgagtttgactgggac
gagacgtcacgggacagtgaggccagcagtgcccggggggactcacggcctcggctggtg
gctcctgcagatttgtcacgctttgagtttgacgagtgcgaagctgccgtcatgctggtg
tccctgggcagctcccgttcaggcaccccatctttctcgccagtctccaatcagtccccc
ttctcccctgccccctccccctccccgtcccctctctttggcttccgtccagccaatttc
agccccattaatgcctcgcccgtaatccagcgggccgccgctcgcagccgccacgtgagt
gccagcaccccaaagggagtcgggggtgccgtgctgagccctgagatgttgcaccacgcc
acctcccgggagcgccatcattcgggcatcagctttcagaccaaccttaccttcaccgtg
ccaatgagtcccagtaagcggaaagccgagtcgcaccacagcagcaccagctcggcagct
gacttccacaagaacgacagtctcgactcgggggtggaatccatttcccacacccctacc
ccttccacccctgctggcttccgggccgtgtcgcctgcgggcgctgggcccttttcctcg
cgctcccagcaggcctccccgctcttgctggtgcccccgccagctggactgacctccgac
ccgagccccacggtgaggagggtgcctgccgtgcagagagattccccggtgattgtgcgc
aaccccgatgtcccgttgccttccaagttcacagagaagccgctggagagccgaggggga
agcccaaggatggggaaagccggctccaaggaacacctgtcgggcaaagggcagttgcaa
atgccggtgcccattaatgtgggccgaactctgccttccagccagcctagcgtggtaact
gtccccgaacaagccccgcccgtcttcagcgtgtcctccccctttcagcctgtggccttc
cacccctccccagctgccctcctgcctctccttgtgcccggagaatacaccggccaccct
actcccaagaaggagatcatcatgggaagacctggcacagtgtggacaaatgtggagcct
cgatctgtggccgtgttcccatggcactcactagtgcccttcctggcgccaagccagcca
gattcctccgtgcagcccagtgaaggccagcagcccgtcagtcatccgtccacatccaat
cagaacaaagaacctcccgaatcggctgctgtggcccacgaactccccgggttgtcttca
gaggctgatagtgcagggaggccaaccccctcgcaccccgacagtcccactccagttgcc
caaccttctacggtgatcccaggaggaagcggagttccatctcagcatgatgatgacctc
tcaggacacccacgcctagacagcgagacggagagcgaccatgacgacgcgttcctatcc
atttcatcttctgagatctcaatcccactactgccaggcaagcggcgcacccaatccctg
agcgcactgccgaaagagcgcgattcctcttccgagaaggatggtcgcagtccaaacaag
agagaaaaggatcacattcggcggcccatgaacgctttcatgatattcagtaagcgacac
cgggccctggtgcaccaacggcaccccaaccaagacaaccgtaccgtcagcaagatcctg
ggcgagtggtggtacgctttggggcccaaggagaagcagaagtatcacgacttggccttc
caggtgaaagaagcccattttaaagcacaccccgactggaagtggtgtaacaaagatcgg
aagaagtctagttcggatataaaatctgccgggccaggcggctgccccaaagagatgcgt
gaacgtagcatgtcagagacagttgcttctgaaatgctgttgggcccagacgtcaaagca
ggtgtcatgggatccgggcattgccacggggagcgaatcctgccctcagcctctgatgct
cagcgtccacgggccttttcccacagcggtgtgcatggcatggacagtgaccgggataac
caggtgttgcaagagcttacccagatttgctcgggacagtctccgtatgccagcgggaag
ggtcagtatggggggctgggcccctcaggatccccctttgcaaccccaggcgagggtccc
cgtcattccctgcacccacattcctcccgtgcctctcgttctcaacgcacaaccagtgag
gacatgaccagcgatgaggagcgcatggtgatctgtgaggaggaaggggacgatgacgtc
attgctgaagacgggttcaatccggctgacgtcgacttgaagtgcaaagaacgagtgacg
gacagcgatagcgaaggatcgttaggggatgaatctgacagcaaggactttggacggaag
ctcttcgccccggtgatccggtcagcagccctgcctccttcttctgccgcctttgcccca
tgtcgtccaccacctcctctggacttggagccgcctccaccgcccccacccctaccgcca
cctcacagtcaccaggagcagcccccatccaaaccttacagttccttccagatgtccccc
agcaccttcaagtcccaagactcgcattcagctctccgtccccacaacaccccaaccaag
cggttggaggcccgctttgacccagcggctgccccctacaggcggaagagagcggacagc
gcaggcggttcccaggggccttctgaggccgggacggctcccctctctgtccccgcccac
tccgtcatctctccgcccagtggggcggtgcagactctggtgcttccggattcgacccgc
ttgtccactggcaccgtgctggtgacagccccatctctcagcaccccaaacatgggggtg
atcggctacagcggatcgcccagctttgtccggactgcatccaccgtggtcaccaacgtg
gtcaagccagttagcagcactcctgtacctattgccagcaaacctttcctgcgtggaacg
ggggacgcgctgccgctggtcagccccccaccttccgacggcaatgcgaagcctgaaggg
atttccgtcagtcgactcggcttgctctacgccgataaaaaggttccacagacctctgcc
atggctggaatccaagccacctctcctcacttagtagctggaccgcttcttggccaaggc
ttggctgccgtggggaagtgccccccgacccaaggaagcgtcgtgaccaatctcctggta
ggaactcaaggttacagccaagccagcggtgctggaggagctggcgttcccgtgactgtt
ttgccacctggcgccattgcccaacagccttctgtccagttcattacccagaatcccccc
ggacagaatgggccagtgccacttagcatcctgcagccccaaggtattttttcaggcaca
gcaggaaaggctgggagcatcactcaggttcagtacatcctacctacattgcctcagcag
ctacaggtagccggcgggaagattccagcagcagcaggcacacctgcagccgccagcatt
cacttcactctgcctccccccaacggaaaagtcatcactgccccccaaggcatccccatc
atccagcctgccccgggaagcaacagcaacagcgtgacagtcatgtcctcggcacccaaa
gttcagtccgtgtcccctgtccaggcgccatctcccagcaattcagcccacctcgtgact
gggcaggtgatgccccctgcagggctacaagtacaaggcaaagtcttggtgccaatggca
gcctcccaagtgacagtaaggaccacctcagccgcccagctgcctctggttactccgcct
ttcactgtcccggtgcaaaatgggagtcagccagccagcaagattatccagctcactcca
gtgccagttgtccagcctcagtcctcttcccagagcagtgccaccttggtgcccccactt
agccctgctgcgctccaaggcaccatggccaccgctgtcattggttccccgagccaggcc
cagaaagtcctgttgccctcctcctcaaccaggatcacctatgtgcagtcggcagctgga
catgctctctccctgggcacctcaacttctcattctcaacccagcatccctccagctgct
cctaccaccacctacgtccagtccccagtggggcctgctcccatggccctgggtttcaca
gctattgggccactgctctcgggtcagaatcctgtgctggcttcgggacaagtgggggtg
tccccacttcagagccctcaactcccagtttccggtgccggacaaggacaggtcatcact
gccgtctaccccacccccacagggaccagtcctgttcagtccgccagtcacagcgtggtc
tattcggtggccgccacgggcactaccacggtctcctctcccacagccatcctgcccaag
ggaggcagcgccagtcagagtgctgggagttccaaccacagcctgatttccacagccgca
caagtgattccttcgacgcccactcggcctcagcgtccacccctcaagcctccccagaaa
gtcaaagccaccattgcgaacatcccagttggttcttacgaagctgtttattcaccaggc
cccgttccccctcctgcggggcagcagcatgattctggagcggcacgataccaccgggag
actgaaaccttagaacggccttcgcgggagacagggccccaagacactccctcttccccc
gcctgccatggcgccgccgacaagagtcctgccaaagctcaggagttgaagcgagattgc
tgggagccaatatcacccccggcgtcccagccatcgcaagtaacggagaccccggccgca
gaagtcgtctggagccagcaggagatggcagcggggcccagcgaagagggtgctgtccgt
gaacctccaccatcctctctgttaggcagcaaagggacagaaatggccccgaaattcccc
agctcccctgactggagaacagccggtccagaggctcgtcctgaggcttcggcctcatct
gcggctcccaattcctcctcttcgctcagtccgatcccgtcaaacgccggagagggctcc
agaagcagcgcttcaactctccccccagtagcagccgcccctacagccgacggccttgac
ccaaaggagagtccaggtgggaagaaagtgaaggtccggcctcccccgctgaagaaaacc
ttcgattctgttgacaatagggttctctctgaagtggattttgaggagcgctttgccgag
ttgcccgagttcaagccggaagaggtcttgccttcacctacgctgcagtcccttgccacc
tctccacgggccatcctgggtagctaccgcaagaagcgcaagaattccaccgacctcgac
tcctccacggaagaccccatctcccccaaacggaagatgcgccgtcgctccagttgcagt
tcggagcccaacactcccaagagcgccaagtgtgaaggagacatcttcacttttgacaaa
acaggcacagacacggatgacgtacttggagaactggagtatgagaaggtgccctactct
tcactccgacgtaccctggatcagaggagagctttagtcatgcagctcttccaggatcat
ggcttcttcccttcagcccaagccactgcagctttccaagcccgctactcggacatcttc
cccaccaaggtctgcttacaactcaagatccgggaagtgaggcagaagattatgcaggca
gccactcctacggagcaagcccccagcacgccagagcccggaggcgccccaggcagcgtt
atgggggtcagcggtgcagagggacagctggcggagttgagcctcccgcaagactccgcc
cagagcacagaggctgccccgccagcagccagcccttccaccacagccgctggctgggac
tgtagccagcagtcttctccagggacggccggtagcagcacctccactgccaccaccacc
agatga
DBGET
integrated database retrieval system
