Pituophis catenifer annectens (San Diego gophersnake): 139321139
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Entry
139321139 CDS
T11059
Symbol
SPTBN4
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04517
IgSF CAM signaling
pcae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139321139 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139321139 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcae04812
]
139321139 (SPTBN4)
Cytoskeleton proteins [BR:
pcae04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139321139 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
139321139 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
PH_17
Motif
Other DBs
NCBI-GeneID:
139321139
NCBI-ProteinID:
XP_070805867
LinkDB
All DBs
Position
Unknown
AA seq
2527 aa
AA seq
DB search
MANIAPAQLDNQEAQQQLSNTQWESTDPTQPRLWEEATATVKLFECSRIKALADERDAVQ
KKTFTKWINSHLGQVSCRIGDLYTDLRDGYLLTKLLEVLSGEQLPKPTRGRMRIHSLENV
DKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDSRETRSAK
DALLLWCQTKTAGYPEVNIQNFTTSWRDGLAFSALIHKHRPDIIDFKKLTKSNAVYNLQQ
AFNTAEQHLGLAKLLDPEDVNVEHPDEKSVLTYVVSFYHYFSKMKALAVEGKRIGKVLDQ
VLEIEKIIERYESLASELLEWIEITIPFITNQKFANSLSGVQQQLQAFTAFCTLEKPLKF
QEKGNLEVLLFSIQSKLRANNRKLYVPKEGKSISDINKAWTQLEKAEHEREVALRAELIR
QEKLELLAQRFDHKAIMRETWLNENQRLVSQDNFGCDLPAVEAAMKKHEAIEADISSYQE
RIQVVLELAQEVESEGYYDSRRIIAQKDNILRQWGLLTELVSARRTRLEQNVALQKIFQE
MVYMIDWMEDLQAQLASKEFGKHLLEVEDLLQKHSLLEADLSAQHDRVQALNAAALKFSE
LQGYQPCDPQIICNRVSHVQGCQERLQELASKRRKELEASRQLWSFLQEVEEAEAWVREK
ERILSSSQSFGKDLDSVAKLLSKHNLLLSEMSGRRSLLQAAMRQGEQALLRKRFGLGNVQ
EKIRDVRLHWKKLEGLAAVHLQKLQGALSFHQFSADTDDLVAWLQDAYRLVSSDDFGHDE
HSTRSLVKKHKGVMQEIDKHRATVLALRKQLAALAPEYHETMEVQIRIVEVEQLYEEVAE
VAVLRCQWLQDALAVYHLFGEVNACEIWLDEKEQWLNRMEVPEKLEDVEAVQHRFESLDQ
EMNSLMGRILDVNEIVQQLIDGGHPSSSEVRSCQDHLNSRWNRVVELVEEKKNHLGSILK
IQNYLLECSEIKSRIREKRKAIESTQYSSGDLGSVLSLQRRLSTIEAALVLLEPRLVELQ
QEGESLATTHPAQAMEVLMQFEEISEEWEALKKTLQGCEDSLTVASRLQQFIQDLDSFLT
WLVKTQAAMASPGEELPGDLSEAERLLHHHALLKEEISRYEEDYAKIQAVNDVLALEEAE
LPYLSLQQWLQKLEVGWNKLLESWEYRREVLVQAHIFFLFLRDAKQAEVCLYNQEATLAH
TELPTTVEGVEKAIKKQKEFMTTMELQMQKTTVALKAGECLIRQGNLYSERVKDKMETLR
AKSGQNVQLANLWMLRLTDHLELQRFLQSCHELDGWVAEKEALMAGEAPRDKDAPSWKQQ
PPPAPKRWLRHRAFMAELAQNKEWLHKIEKEGQRLIQEKPELAETVRKKLGEIRQCWAEL
ESATQMKAQQLLEATQADRIVQSYVELDKQLLHMESQLQMVDAGPDLASVNSNLKKLQTL
ETQVEEWSKEVGELQAQVAALPLETAGQEMVDDRQNVVGARIVRLIEPLRERRRILLASK
ELHQVSHDLEDELVWVQDRLPLAMLKDRGSNLQSVQQLIKKNQNLRREIQVHKPRVDEVL
VRAGGIASIQSPEVDTMRLLWEKLSELWGALQEETEQRQQLLDATYQVEQYFFDVGEVEA
WLSEQELFMMNDEKGKDEQSTLQLLKKHLMTEQTVENYAETIAQLSRQCRSLLELGHADS
EQVSRRQSQVDRLYVSLKDLVEERKASLEQQYWLYQLHREVDEMEHWIAEKEVVAGSPEL
GQDYEHVTLLQEKFTEFASETGTIGNERILAINQMVDELIEYGHVDAATIAEWKDGVNEA
WADLLELIETRAQMLAASHELHKFFNDCKDVLSQIEEKKQRLPAIAARECKTSAGTLQRM
LKSFEHDIQVLVAQVRQLQEVAAQLQTVYAGENADAIATKEQEVMRSWKELLSSCEDCRL
QVTTTADKIRFLNLVRDLISWMDILLCQIGAGEKPRDASTVEVLMSDHQGLKGEIEARSK
SISACVDLGKTLVLNRSPASEEIKLHLEKLMTKKKEMVDKWDQHWEWLQQMLEVHQFAQE
AVVADAWLTAQEPLLRSRELGNSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTIEKL
KAEQSKQPPTPLLGRKIFPDPAELSNKGASLLCQPLFEKAHALLNGLEPEPTEAKMAYVR
QGLKPERLQPKIDHLQEGLGAAVEAKAQEKVGEATAAVEEALRVGTLSRAPGSFLEQGEA
KVSRSDRHRERQEPRHPLERHESTEQDAPRHEPAERKRERRDRRAERRESSEQEAPQMDP
KAGGKATLADIVEQLQEKESGVLAPTTPRERESPARLPNGLDVLPERMPRPDRPRARDRP
KPRRRPRPKDSNAPPGEARRSRSAPAQSSAPPPPPPTHTIQQEGYLLRKLELEGPNKKAT
NRSWINLYCVLSKGELGFYKDSKGRESGSTHSSEPLLSLQTGTAEVANDYKKKKNVLKIK
TNDGAEFLLQAKDEEDMKTWLTALSSSIAEHAEITRWGQALLTTSSTDEGLPKRDTDRRA
STSGRKK
NT seq
7584 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacattgcaccggctcagctggataaccaggaggcccagcagcaactcagcaat
acccaatgggagagcaccgatcccacccagccccggctttgggaggaggccacggccacc
gtcaagctcttcgaatgctcacggatcaaggccctcgcggatgagcgagatgcagtgcag
aagaagactttcaccaagtggatcaactcccacctgggccaggtctcctgccgaatcggc
gacctttatacagacctgagagacggatacctgctgaccaagctgctggaagttctgtct
ggggagcagctgcccaaacccacccgggggagaatgcggatccactccctggaaaatgtg
gacaaagccttgcaattcctgaaggagcagcgagttcacctggagaatgtgggttctcat
gacattgtggatggcaaccaccgcctgaccttgggcctcatctggaccatcatcctgaga
tttcagatccaggtgattaaaattgaaacagaagacagccgagagacccgctcggccaag
gatgccctcttgctctggtgccagacgaagacggcaggttaccccgaggttaacattcag
aacttcaccaccagctggcgggacgggctggccttcagcgctctcattcacaagcacagg
ccagatatcattgacttcaagaagttgaccaaatccaatgcagtctacaacctccagcag
gccttcaacaccgctgagcagcatttaggcctggctaaacttctggaccccgaggatgtc
aatgtggagcatccagatgagaagtctgttcttacctacgtggtttctttttaccactac
ttctccaagatgaaggcgctggctgtggaggggaagcggataggaaaggtattggatcaa
gtgctggagatcgagaagatcatagagcgatatgaatctctggccagcgagttactggaa
tggatcgagatcaccatccccttcatcaccaatcagaagtttgccaactctctgtctggg
gtccagcagcagctgcaggccttcaccgccttctgcaccctggagaagcccctcaagttt
caggaaaaggggaacctggaggtgttgcttttctccatccagagcaaactccgtgccaac
aatcgcaagctctacgtccccaaggagggcaagagcatctcagatatcaacaaggcctgg
acacagctggagaaggcagagcatgaacgggaagtggcccttcgcgctgagctcatccgg
caggagaagttggagctgctggcccaacgtttcgaccacaaagccatcatgcgggaaact
tggctgaatgagaaccagcggctggtctctcaggacaactttggctgtgacctgccagcc
gtggaggccgccatgaagaagcacgaggctattgaggcagatatctcctcctaccaggaa
cgcatccaggtggtgctggaactggctcaggaagtggaatctgagggctactatgacagc
aggcgcatcattgcccagaaggacaacatcttgcgccagtggggactattgacggagctg
gtcagtgcccggcgcacccgcctggaacagaatgtcgccctgcagaagatcttccaggag
atggtctacatgattgactggatggaagacctgcaggcccagctggcatcgaaggagttc
gggaagcatcttctggaggtggaggacctgctgcagaagcacagcttgctggaggccgac
ctgtctgcgcagcacgaccgggtccaggccctcaacgctgcagccctcaagttctcggag
ctgcaaggctaccagccttgcgacccccagattatttgcaaccgtgtcagccacgtccag
ggctgccaggagcggctgcaggagcttgcgtccaagcggcggaaggagctggaggcctcc
cgccagctgtggtccttcctgcaggaggtagaggaggccgaggcctgggtgcgggagaag
gagcgcatactgtcgtcctcccagagctttggcaaggacctggacagtgtggccaagctg
ctgagcaagcataacctgctcctgagtgagatgagcggccgccgctccctgctgcaggcg
gccatgcggcagggtgagcaggccttgctgcgcaagcgcttcggcctgggcaatgtgcag
gagaagatccgggacgtgcgcctgcactggaagaagctggaggggctggcggctgtccac
ctgcagaagctgcaaggggccttgagcttccatcagttcagtgccgacacggacgactta
gtagcctggcttcaggatgcctaccgcctagtctccagtgatgactttgggcatgatgag
cactccacccgctcgctggtcaagaagcataagggggtgatgcaggagattgacaagcac
cgggcaacggtcctggccctgcggaagcagctggccgccctggcgcctgagtaccatgag
accatggaggtgcagatccgcatcgtggaagtggagcagctgtacgaggaggtggctgag
gtggccgtgctgcggtgccagtggctgcaagatgccctggcagtgtaccacctctttggc
gaggtgaacgcctgtgagatctggcttgacgagaaggagcagtggctcaatcggatggaa
gtgcctgagaagctggaggatgtggaggcggtccagcaccggtttgaaagcctcgaccaa
gagatgaacagcctgatgggtcgcatcctggatgttaacgaaatagttcagcaactgatt
gatgggggccaccctagttcctctgaagtccgatcctgccaggatcatctcaacagcagg
tggaaccgagtggtggagctggtggaggagaagaaaaaccaccttgggtccatcctgaag
atccagaactacctgctggagtgcagcgagattaagtctcggatccgggagaagcgcaag
gccatcgagtccacccagtacagcagtggcgacctgggcagcgtcctctcactccagcgc
cgcctctccaccatcgaagcagccctggtactcctggagccccggctggttgagctgcag
caggagggggagtccttggccaccacccaccctgcccaggccatggaggtcctcatgcag
ttcgaggagatcagcgaggagtgggaagctttaaagaagacactgcagggctgcgaggac
tcgctgacggtggccagcaggctgcagcagttcatccaggacctggacagcttcctgacc
tggctggtgaagacccaggcagccatggcctcacccggggaggagctgccgggggacctc
tcggaggctgagcggctgctgcaccaccatgctctgctcaaggaggagatcagccgctat
gaggaggattatgccaagattcaggctgtcaatgatgtgctggcactggaggaagctgag
ttgccctacctgtccctccagcagtggctgcagaagctggaggtgggctggaacaagctg
ctggagagctgggagtaccgccgggaggtcctggtgcaggcacacatcttcttcctcttc
ctgcgtgatgccaagcaggccgaagtttgtctgtacaaccaggaagccacgctggcccac
acagagctgcccacaacagtggaaggggtggagaaggcaatcaagaagcagaaagagttc
atgaccaccatggaactccagatgcaaaagaccacagtggctctcaaggcgggcgagtgc
ctgattcggcaaggcaacctctatagtgagcgggtgaaggacaaaatggagaccctccgg
gcaaagagtggacaaaatgtccagctggccaacctctggatgctgcgtctcactgaccac
ctggagctgcagcgcttcctgcaaagttgccatgagctggatggctgggtggcggagaaa
gaggcgctgatggccggcgaggcgcctcgtgacaaggacgcgccgtcatggaagcagcag
ccgccgccggcccccaagcgatggctccggcaccgcgccttcatggccgagctggcgcag
aataaggagtggctgcacaagatcgaaaaggaggggcagcggctgattcaggagaaacct
gagttagcggaaacggtgaggaaaaagctgggtgagatccggcagtgctgggcagagctg
gagtcagccacccagatgaaggcccagcagctcctggaagccacccaggccgaccggata
gtgcagagctatgtggagctggacaagcagcttctgcacatggagagccagctgcagatg
gtggacgctgggccagacctggccagtgtaaacagcaacctcaagaagctacagaccctg
gagacgcaggtggaggagtggtccaaggaggtgggggagctgcaggcccaggttgctgct
ctgccgctggagacggctggccaggagatggtggatgacaggcagaatgtggtgggggca
cggatcgtgcgcctcattgagcccctccgggagcgccgaaggatcctgctggcctccaag
gagctgcaccaagtcagccacgatctggaggacgagctggtctgggtgcaggaccgcctc
ccactggcgatgctgaaagaccgggggagcaacctgcagagcgtccagcagctgatcaag
aagaaccagaacctgcgccgcgagatccaggtacacaagccccgagtggacgaggtgctg
gtgcgagctggtggcatcgcctccatccagagccctgaggtggacacaatgcggctgctc
tgggagaaactctccgagctgtggggtgccctgcaagaggagacggagcagcggcagcag
ctgctggatgccacctaccaagttgagcagtacttcttcgatgtgggggaggtagaagcc
tggctgagcgaacaggaacttttcatgatgaacgacgagaagggcaaggatgagcagagc
acactgcagctgctgaagaagcacctgatgaccgaacagacagtggagaactatgcggag
accatcgcccagctgtcacggcaatgccggtccctgctagagctgggccacgcagacagc
gagcaggtcagcaggaggcagtcccaggtggaccggctctacgtgtccctgaaagacctg
gtggaggagcgtaaggctagcctggagcaacagtattggctttaccaattgcatcgtgag
gtggatgagatggagcactggatcgccgagaaggaggtggtggctggctcgcctgagctg
gggcaggactacgagcacgtgaccttgctgcaggaaaagttcaccgagtttgccagtgag
actggcactattggcaatgagcggatcttggccatcaaccagatggtggatgagctgatt
gagtacggacacgtggatgctgccaccattgccgagtggaaggacggtgtgaacgaggcc
tgggcagacttgctggagctgatcgagaccagggcacagatgctggctgcctcccatgag
ctgcacaagttcttcaatgactgcaaggatgtcctctcccaaattgaggaaaagaagcag
cgcctgcccgcgattgcagcccgggaatgcaagacctcggctgggactctgcaaaggatg
ctcaagtcctttgagcacgacatccaggtgctggtggcccaggtacggcaattgcaggag
gtggcagcccaactgcagacagtgtatgcgggtgagaatgccgacgccatcgccaccaag
gagcaggaggtgatgcgttcctggaaagagttgctgagctcgtgcgaagattgccggctg
caggtcaccaccacggccgataagatccgcttcctgaacttagtgcgggacctcatttcc
tggatggacatcctcctctgtcagattggtgctggtgagaagcccagggatgcgtccact
gtagaggtgctgatgagcgaccaccaaggcctgaagggtgaaattgaggctcgcagcaag
tccatctctgcctgcgttgatctaggcaagacgctagtgctgaacagaagcccggcctct
gaggagatcaagctccacctggagaagctgatgaccaagaagaaggagatggtggacaag
tgggatcagcattgggagtggctgcagcaaatgctggaggtgcaccagtttgcccaggag
gccgttgtggcggatgcctggctgaccgcccaggagcccctgctgaggagccgggagctg
ggcaacagcgtggatgaagtggagcagctcatccggcgccatgaagccttccggaaagct
gctgccgcttgggaggagcgcttcagctccctgagacgtctcaccactattgagaaactg
aaggccgagcagagcaagcagccccccactcctcttttgggccgaaagatcttcccggac
cctgctgagctgagcaacaagggcgcctccctcctgtgccagccgctcttcgagaaggcc
catgcgctgctcaacggactggagccagagcccactgaggccaagatggcctacgtccgg
caagggctgaaaccggagcggctgcagcccaagattgaccacctgcaagagggcctgggg
gctgcagtagaagccaaagcccaagagaaagtaggtgaggccaccgcggctgtggaggaa
gccctcagagtgggtaccctgagccgagctccagggtcctttctagaacagggggaggcc
aaagtaagccggtcagataggcaccgggagcgccaggaaccccggcacccgctggaacgg
cacgagtccaccgagcaggatgcaccccggcatgaaccagccgagcgcaagagggagaga
cgagaccggagggcagagcggcgggaatccagcgagcaggaggctccccaaatggacccc
aaagcaggaggcaaagccaccctggctgacattgtggaacagcttcaggagaaggaatca
ggggtgctggcccctaccacgcctcgggaaagagagtctcctgcccgccttcccaatggc
ctcgatgtgctcccagagaggatgccacggccggaccggccccgtgcccgcgacagaccc
aaacctcgacggaggccccgtcccaaagattccaacgcgccaccaggtgaagcccggcgt
tctcgttcggcccctgcccagagcagtgccccacccccgccgccccccacacataccatc
cagcaggagggctaccttctccgcaagctcgagctggaggggccaaacaagaaagccacc
aacagatcttggatcaacctttactgcgtcctcagcaaaggggagttgggcttctacaag
gactccaagggccgggaatctgggagcacccacagcagcgagcctctgctgagcctgcag
actggcaccgcggaggtggccaacgactacaagaagaagaagaacgtgctgaagatcaaa
actaacgacggggccgaattcctcctgcaagccaaggatgaggaggacatgaagacctgg
ctgacggctctgagttcgtccattgcggagcatgcggagatcacccgctggggccaggca
ctgctcaccacctcctccacagacgaaggcctccccaagcgggacacagacagaagggcc
agcacgtctggcaggaagaaatga
DBGET
integrated database retrieval system
