KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139321151
Entry
139321151         CDS       T11059                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    139321151 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcae03400]
    139321151 (XRCC1)
DNA repair and recombination proteins [BR:pcae03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     139321151 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 139321151
NCBI-ProteinID: XP_070805884
LinkDB
Position
Unknown
AA seq 652 aa
MPEIEIRHVVSASSSDTTHCAENLLKADTYRKWKAAQAGEKQVSVILQFEKEEQIHSIDI
GNEGSAFVEVLAGSSASSSEQTYEVLLVTSSFMSPSESKSSTNLNRVRMFGPDKLVKATA
EKKWDRVKIVCTQPYTKSLAYGLSFVRFHSPPDSSETHSKAASPKVTKLGQFKVKEDDSN
SSSLKPGALFFSRASKPLVSPPKASQNDQPSPSYAAASLQTNKSLSPDSSPSVVDKPTTK
TSPKEPTPVKRKFEFSKENAGLSSATKKAIPDKSRVTHPPSKKHKVSLSTSPPQKTLPLK
KALPTQSSEETAANGPFQQLLQGTVFVLSGFQNPFRSELRDKALEMGAKYRPDWSPDSTH
LICAFANTPKYSQVKGLGGTIVRKEWILDCHRTRRCLPCKRYVMGGPESSSSEQEEESEE
ETSAPPRRPLTPQQKTSVPSPNHKVKPATSPKILQAVPPKVSSGEEEEEPTTSQNSNIHN
NSRASSGDEKFAGLQDNGDEGSGDTDDELRRVEEEHRKKQQGGRRIIPEPDNDPYAGSTD
ENTDVEEQVEPDQPIPELPDLFVGKCFFLYGEFPSQERRLLNRYIIAFNGEVEDYMNERV
NYVITAQEWDDTFDEALNDNPNLSFVRPRWIYNCNDRQKLIPHQPYVVVPRV
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgccggagatcgagatccgacatgtggtctccgcgagcagctccgacacgacgcattgt
gctgagaacctgctcaaggctgacacctatcgcaagtggaaggctgcccaggctggggaa
aagcaagtttcggtcatattacaatttgaaaaagaggagcagattcacagcattgatatt
ggcaatgaaggctctgcctttgtggaagtgctggctggcagctctgcctcttccagtgag
cagacttatgaggtgctgttggttacatcctccttcatgtctccctcagagagcaagagt
agcaccaacttgaacagagtccgtatgtttgggccagataaactggtgaaggcgactgct
gagaagaagtgggaccgagttaagattgtttgtacccagccatataccaagtctctggcg
tatggcctttccttcgtgaggttccattctcctccagacagcagtgagacacattccaaa
gcggcttcaccgaaggtcaccaaattggggcagtttaaggtgaaggaggatgacagcaac
tccagctctctgaaacctggtgctctctttttcagccgtgccagtaaacccctggtctcc
cctcctaaagcatctcagaatgaccagccttcacccagttatgctgccgcctcactgcag
accaacaaatctctttctcctgactcttcaccatctgtggtggacaagcccaccaccaaa
acctcacccaaggaacccaccccagtcaaaaggaagtttgagttcagcaaagaaaatgct
ggcctctcatcagcaaccaagaaagctatccctgataagtcccgcgttacacacccacct
tccaaaaaacacaaagtttctctctccacgtctcctccccagaagacgctgcctttgaaa
aaagctcttcccacacagtcttcagaggagacggcagcaaacgggcctttccagcaactc
ctacagggtactgtcttcgtgctgagcggcttccagaacccctttcgctctgaattaagg
gacaaggccttggagatgggggccaagtaccgtccagactggtcccctgacagcactcac
ctcatctgtgcctttgccaacacccccaaatacagccaggtgaaagggctcgggggcacc
attgtacggaaagagtggatcctggactgccaccgtacccgtcggtgcttaccctgcaaa
aggtacgtgatgggtggccccgagtcatccagcagcgaacaggaagaggagagtgaggag
gagacctcagctccgcctcgcagacctttgactcctcaacagaaaaccagtgtgcccagc
cccaaccacaaagttaagcctgccaccagccccaaaatattgcaggcagtgccaccgaaa
gtgtcttccggagaggaagaggaagagcccaccacctctcagaacagcaacatccacaac
aattcaagggcatccagcggggatgagaaatttgcaggtcttcaagacaacggagacgaa
gggtctggtgacaccgatgacgagttaaggagagtcgaagaggaacaccgcaaaaagcag
caaggcggacggaggatcatcccagaaccggacaacgacccctacgctggttccactgac
gagaacacagacgttgaggaacaggtggagccagatcagcctatcccagaacttccagat
ctgtttgtgggcaaatgcttcttcctttatggtgaattcccttctcaggaacgacgcctc
ttgaatcgctacatcatagcttttaatggggaagtggaggactacatgaacgagcgtgta
aattatgtgatcacggctcaagaatgggacgacacgtttgatgaggctctgaatgacaat
cccaacctttccttcgtgcgtccccgttggatctacaactgcaacgaccggcagaagctg
attccccaccagccgtacgtcgtggtgccgcgagtgtag

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