Pituophis catenifer annectens (San Diego gophersnake): 139321311
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Entry
139321311 CDS
T11059
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139321311 (NPAS1)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139321311 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
139321311
NCBI-ProteinID:
XP_070806082
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MASLYGSELKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARSRRGKENFEFYELAK
LLPLPGAITSQLDKASIVRLTITYLKMRTFALQGDPPWTLRAEAPAPAGNVRVIKPSSRR
SINGLLTELFEKHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSIFD
YVHPGDHLEVADQLGLKAPLGPGHPHRPKASLLGSSASSEGPQSGTATLGPPIAPDDGGL
ERSFFVRLKSTLTKRGLHIKTSGYKVIHVTGRLRSRRPSYPHAHSVLGRVLGLVALAHTL
PPSTLSEVRIECHMFVFRVNMNLQIVYCESRITDYMDLCPSELVGKSCYRFIHGEDVEGI
QQSHLDLLNKGQVVTRYYRWLQKNGGFVWVQSCATISVNVKNPSERNMVWVNYILSKPEC
KNIALDVFQVPGIPARQTEAPSAGTDFKESDQGKPCPASKPPGTLAQSYPRSVAEMGRHC
HLVESKPSAPETKYPEEAASEEGAGSNTETPPRKRIKLEFPPESPPSKGKEETSLTSSED
SDSSSDSEPEMVPQQTGLLARKVNGCKTSGRKTMVPGRPCTSEFTSVIQTQKGASLRASP
ALSIKSEQGLQAKGGLWTCPGAKASPFPVNKALRLEKPVVRQASSHLYVSIPDSVLTPPE
MDSGPAKGPFSASPRAAPSSSGDTLSPPLSGSPCEDRGTATPFTPLIYPTEMEVLQRFHT
SNVVVPLMHQLGNPHTSSPAGSPGLYTTSTIRYAPADMTLAMPSNMLPPSHHPLSLMDIS
SAEAKTSREIMYHHLQRLNMVGPFGNSASLAQISGGAFAAADSLFSTLPFSVASGGIHSG
SALERKED
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctctacggcagcgagctcaagtgcgtcagcgtagagtgggatttcctgcag
gggctgctggtcaagaaccagccggtgccctgcctgcaggctctacggaaggaaaaatcc
cgcaacgcagctcgttcccgccgaggcaaggaaaacttcgagttttacgaactggccaag
ctcctgccgctgcccggcgccatcaccagccagctggacaaggcctccatcgtccgtctc
accatcacctacctgaagatgcgcacctttgccctccagggcgaccccccctggaccctg
cgggcagaggccccggccccggcgggcaacgttagggtcataaaaccttccagtcggagg
agtatcaacgggctgctgacggagctctttgaaaagcacttaggaggccacatccttcag
tccctggatggcttcgtctttgcactgaaccaagaggggaaattcctttacatctccgag
acggtgtctatttacctgggcctttcacaggtggagctgaccggcagcagcatcttcgac
tacgtccaccctggagaccatctagaagtggcggatcagctgggcctgaaggctcccctg
ggccccggtcacccccaccgccccaaagcctccctcctgggctcctccgcctcatccgag
ggtcctcagtcaggtacagccactcttggaccccccatagcgcctgatgacggaggcctg
gagcgttccttcttcgtccgtctgaagtccactttgaccaagagaggacttcacatcaag
acttcaggctataaggtgattcacgtcacgggccgcctccgttcccgacgtccgtcctat
ccccacgcccactcggtgctgggccgggtgctgggacttgtagcgctggcccacaccctg
cccccttccaccctcagcgaggtgcgcattgagtgtcacatgttcgtcttccgggtcaac
atgaaccttcagatcgtgtactgtgagagcaggatcactgactacatggatttatgtccc
tcggaactcgtggggaagagctgctatcggttcattcatggagaagacgtggaagggatc
cagcaaagtcacctggacttgttgaacaaggggcaagtggtcacccgctattatcgctgg
ctgcagaaaaacggcggcttcgtctgggtccagtcctgcgctaccatctcggtcaacgtc
aagaatccctctgaaagaaacatggtgtgggtgaactacatcctcagcaaaccagaatgc
aagaacatcgctctggatgttttccaggttcctggcatccccgccagacagacggaagcg
cccagcgcaggaacggatttcaaagagagtgaccaggggaagccgtgcccagccagcaaa
cccccggggaccctggcccagtcctacccaaggagcgtggccgaaatggggcggcactgc
cacctggtggagagcaagcccagtgctcctgaaaccaaatatccagaagaggcggcatcg
gaggagggggctggcagcaacacagagacccctcccaggaagcgcatcaaactggagttc
cctcctgagagccccccgtccaaggggaaggaggagacctcgctgaccagctccgaggac
tctgacagcagcagcgattcagagccggagatggtcccccagcagacggggctcctggcc
aggaaggtgaatggttgcaagaccagtgggcggaagaccatggttcccggccgaccctgc
acgtcggagttcacctctgttatccagacccaaaagggcgcctccctcagagccagtccg
gctctcagcatcaaatcggagcaggggctccaggccaaaggggggctctggacctgtcct
ggggcgaaggccagtcctttccctgtgaacaaagcccttcggctggagaagcccgtagtg
agacaggcgtcctcgcacttgtatgtctccatccccgactcagtgctcaccccacccgag
atggacagcggtccagccaaggggccctttagcgcctctccccgggcggctccatcctcc
tcaggggacacgctctcgcctccgctctcgggctccccctgtgaggaccggggcactgcc
acgcctttcaccccactgatctacccgacggagatggaagttctccagaggttccacacg
agcaacgtggtcgtccctttgatgcatcagctcggcaatccgcacaccagttccccggct
ggctccccgggactctacaccacgagtaccattcgctacgcccccgcggacatgaccctg
gccatgccgagcaacatgctgccgccttcccaccaccccctcagcctcatggacatcagc
agtgccgaggccaagacctcccgggagatcatgtaccatcacctgcagcggttgaacatg
gtgggcccgtttgggaactcggctagcttggcccagatttccgggggagcctttgcggct
gcggactctttgttttccaccctgcccttctctgtggccagtggggggatccacagtggg
tcagctctggaacgcaaggaggattaa
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