Pituophis catenifer annectens (San Diego gophersnake): 139321462
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Entry
139321462 CDS
T11059
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
pcae
Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139321462 (WDTC1)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139321462 (WDTC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
TPR_19
TPR_2
TPR_17
TPR_11
TPR_1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
DSE1_N
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_2nd
ANAPC3
PAC11
Beta-prop_HPS5
TPR_16
TPR_14
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
TPR_6
Beta-prop_Aladin
Beta-prop_SPT8
ASA1
NBCH_WD40
TPR_9
Beta-prop_VPS8
Beta-prop_WDR19_1st
TPR_BSK1_C
Beta-prop_IFT140_1st
Barstar
CFAP70_TPR_C
CFAP70_mid_TPR
Motif
Other DBs
NCBI-GeneID:
139321462
NCBI-ProteinID:
XP_070806284
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MDMNSAGMLGFTARPSLTCFRRPYCEKMAKANIIGDLISRQLKEKGALSFERHYHVTDPF
IQRLGLEAELQGHAGCVNCLEWNEKGNLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI
FSVKFLPHAEDRILITGAADSKVHVHDLTVKETTHMFGDHKNRVKRIATAPMWPNTFWSA
AEDGLIRQYDLRENSKHSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRIYD
IRMIHNHRKSMKQNPAAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATY
VTFSPDGTELLVNMGGEQVYLFDLTYKQRPYTFLLPKKCHTPGEVQNGKTSANGVSNGIH
LHSNGFRLSEGRAHVSPQVELPPYLEKIKLQANEAFACQQWTQAIQLYSRAVQKAPNNAM
LYGNRAAAYMKRKWDGDHYDALRDCLRAISLNPCHLKAHFRLARCLFELKYVAEALECLD
DFKGKFPEQAHSSACDALDRDINAALFSKSDNGEDKKGSGPIWLRATGRKDSISEDEMVL
RERSYDYKFRYCGHCNTTTDIKEANFFGSNAQYIISGSDDGSFFIWEKETTNLVRVLQGD
ESIVNCLQPHPSYCFLATSGIDPVVRLWNPRPESEALNGRVVEDMEGASQANQRRMNADP
LEVMLMNMGYRITGMTGGGSGGSDDEDSSENQVHCRTS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaactctgctggaatgcttggattcacagcaagaccatcactaacttgcttt
cgtaggccctattgtgaaaagatggcaaaagcaaatattattggagacctcattagcagg
cagctcaaggaaaagggtgccctcagttttgagcgacactatcatgttaccgacccattc
attcagcgtctgggcttggaagcggagctgcaaggtcatgctggctgtgtcaactgcctt
gaatggaatgaaaagggaaacttgttggcctctggctctgatgaccagcacaccattgtg
tgggatcctctgcaccataagaaactcctttccatgcacacggggcatacagcaaacata
ttttctgtcaagttcttgccgcatgcggaggaccggatacttattactggggccgctgat
tccaaagtgcacgtccacgacttgactgtcaaagaaacaacccacatgtttggggatcac
aaaaacagagtcaagcgaattgccacagctccgatgtggcccaacaccttctggagtgcg
gcagaagacgggctaatcagacagtatgacttgcgagagaatagcaaacactcagaagtt
ctgatagacctgactgaatactgtgggcagcttgtggaggcaaagtgcctcacagtcaat
ccccaggacaataactatctcgctgtgggagccagtggaccctttgtccggatttacgac
atacgcatgatccacaaccacaggaaaagcatgaaacagaaccctgcagctggtgtccat
acattctgtgatcgacagaaacccctcccagatggcgctgctcaatactatgtagcaggg
catcttccagtgaaattacctgactacaataaccgactaagagttttggtagctacctat
gtcactttcagcccagatggtacagagctcttagtcaacatgggaggagaacaggtttac
ttattcgacctgacgtataagcagcggccatacacttttctcctgccaaaaaaatgccat
actccaggggaggtgcagaacgggaaaacatcggccaatggcgtatcaaatggcatccat
ctccacagcaatggtttccggctctctgaggggcgagcccatgtcagcccacaggtagag
ctacctccctatctcgagaagattaagctgcaggccaatgaggcttttgcttgccagcag
tggactcaagccatccagctctacagcagagctgtccagaaagcccccaacaatgccatg
ctctatgggaaccgagcagctgcttacatgaagcgcaagtgggatggagatcactacgat
gcgctccgagactgcctaagggccatctccctgaatccttgccacttgaaggctcacttc
cgcctggcccgctgcctcttcgagctgaagtatgtagcagaagccctggagtgtctggat
gatttcaaaggaaagtttcccgagcaagcccacagcagtgcttgcgatgccctggaccgg
gacatcaatgctgcccttttctccaaaagtgataacggggaagacaagaaagggagtggc
cccatctggctgcgagcaactggccgcaaggattcaatatcggaggatgaaatggtgctg
agggagcgcagctacgactacaaattcagatactgcggccactgcaataccaccacagac
atcaaagaggcaaacttctttggcagcaatgcgcagtacatcatcagtggctccgatgat
ggttccttctttatctgggagaaagaaacaactaatctggtgcgagtgctgcagggcgac
gagtcgattgtgaactgcctccagccccacccgagctactgcttcctggccaccagtggc
atcgatccagtggtacggctttggaatcccaggccagaaagcgaagcactgaacgggcga
gtggtagaagatatggaaggcgcttcccaagccaatcagaggcggatgaatgctgatccc
ttggaggtgatgttgatgaacatgggctaccggatcacaggaatgactggtggtgggtct
ggaggctcggatgatgaagacagctctgagaatcaggtccactgccggaccagctaa
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