Pituophis catenifer annectens (San Diego gophersnake): 139321501
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Entry
139321501 CDS
T11059
Name
(RefSeq) homeobox protein six1b-like
KO
K15614
homeobox protein SIX1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139321501
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
139321501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
139321501
NCBI-ProteinID:
XP_070806348
LinkDB
All DBs
Position
Unknown
AA seq
265 aa
AA seq
DB search
MNFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR
ELYKILEGYQFSPHNHPKLQQLWLKAHYTEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG
EETSYCFKEKSRSVLREWYIHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAET
KERENGEGGVLKEGHGLPRDRHMIPSSEDESSPIDSPSLLYPALQLSVPEGSSIHNAQRV
DYLQNQPLHNGLLGSLTSTLVNLGS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaattttggcttcacgcaagagcaagtggcttgcgtgtgtgaagtcttacaacaaggg
ggcaacatcgagcgcttaggacgtttcctctggtccctgccagcttgtgaccacctgcac
aagaacgagagcgtcctgaaggccaaagcagtggtggctttccatcggggcaatttccga
gagctctacaagatcttagagggctatcagttctctccccacaatcaccccaaacttcag
caactctggctcaaagctcactacaccgaagcagagaaattgcgtggaaggccgctggga
gccgtgggaaaataccgggtgcgtcgcaaattccctttgcctcggactatctgggacggg
gaagaaaccagttactgtttcaaggaaaaatcccggagtgtgttaagggaatggtatatc
cacaacccctacccatcccctcgtgagaaaagagaactggcagaagctactgggctgacc
acaactcaggtcagcaactggttcaagaaccggcgccagagagaccgtgcggcagagacc
aaagagagggagaatggcgagggcggcgttttgaaggaagggcatggcctgccccgagac
agacacatgatccccagctctgaggacgaaagctcccccattgacagcccctcactcctc
tacccggccttgcagctttcagttcccgagggatcctccattcacaatgcccaacgggtg
gattacctgcagaaccaacccctccacaatggcctcctggggtccctcacttccactctc
gtaaatctgggatcctga
DBGET
integrated database retrieval system
