Pituophis catenifer annectens (San Diego gophersnake): 139321708
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Entry
139321708 CDS
T11059
Symbol
DPF2
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139321708 (DPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcae03041
]
139321708 (DPF2)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139321708 (DPF2)
Spliceosome [BR:
pcae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139321708 (DPF2)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139321708 (DPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
Lar_restr_allev
zf_RING_Vps8
PHD_2
Motif
Other DBs
NCBI-GeneID:
139321708
NCBI-ProteinID:
XP_070806634
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MAAVVQNVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
HRGPGLASGQLYSYPARRWRKKRRSHPPEDPRLSFPTIKPDTEQALKKEGLISQDGSSLE
ALLRTDPLEKRSLPDPRTDEDSLSEFPVANSRTRKRILEPDDFLDDLDDEDYEEDTPKRR
GKGKAKGKGVGSARKKLDAAILEDRDKPYACDNSYKQKHTSKPPDRVCGKRYKNRPGLSY
HYAHCHLAEEEGEDKEDSQPPTPVSQRSEEQKTKKGPDGLALPNNYCDFCLGDSKINKKT
GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
DCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKEKASIFQNQNAS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggtacagaatgtggtgaagctccttggtgaacaatattacaaggatgca
atggagcaatgtcacaattataacgcccggctgtgtgccgaaaggagtgtccgattaccg
ttcctggattcgcagactggggtggcgcagagcaactgctacatttggatggagaagcgg
cacaggggaccaggtttggcgtctggccagctctattcttatccggctcgacgttggcgg
aaaaaacgccgttcccatcctccagaggatccaagactttctttccctaccattaaacca
gacactgagcaggccctaaagaaagaaggcttaatctctcaagatggcagcagtttggag
gccctcttaaggacagacccccttgagaaacgcagcttgcctgaccctcgtaccgatgaa
gacagcctcagcgagttccccgttgccaatagccgcacccggaagcggatcctggaaccc
gatgacttcctggatgatctggatgatgaagattacgaggaagacaccccaaaacgacga
ggcaaaggaaaggccaagggtaaaggagttgggagtgctcggaaaaagctggatgctgcc
attttggaagacagagacaaaccttacgcatgtgacaatagttacaaacaaaagcatacc
tcgaaacctcctgaccgagtctgtgggaaacgctacaagaaccgtccgggcctgagctat
cactacgctcactgtcacctggcggaagaagaaggggaggacaaggaggactctcaaccc
cccacgcccgtctcacagagatcagaggagcagaaaaccaagaagggtcccgatggcttg
gccctgcccaataattactgcgacttttgtctgggggactcgaagatcaacaagaagacg
gggcaacccgaagagctggtttcgtgttcggactgcgggcgatcagggcacccatcttgc
ttgcagttcaccccggtcatgatggctgccgtgaagacctaccgctggcagtgtatcgaa
tgcaagtgctgtaacatctgcggcacctcggagaacgatgaccagctgctgttctgtgac
gattgtgaccgtggttatcacatgtactgcctcaccccacctatgtcagaacccccagaa
gggagctggagctgtcacctctgcctggatttgctgaaggagaaagcctcaatcttccag
aaccagaacgcctcctga
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